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The map label for this gene is yvrB [H]

Identifier: 163844884

GI number: 163844884

Start: 723971

End: 725014

Strand: Reverse

Name: yvrB [H]

Synonym: BSUIS_B0746

Alternate gene names: 163844884

Gene position: 725014-723971 (Counterclockwise)

Preceding gene: 163844885

Following gene: 163844883

Centisome position: 51.76

GC content: 61.97

Gene sequence:

>1044_bases
GTGACGGTGCGCGCCGCCGCGATACGGTTTTCAATGAAAAGCCGGATGGGCGCCGGGGTGCTGGCGCTTGTCCTGTTATT
CGTGGCTTTGTGGCTGGGGGCTGCCATTGGCGAAACCTCCATACCGCTTGACGTGGTGGCGAAGACGGTTGCCAACCGCC
TCTGGTATGCAGGCTATCCCCTCGATCCAATCGATGAGGGGATCGTCTGGAGCTATCGGCTGAGCCGCGCTGTGGTTGCG
GCCTGTTGCGGCGCTGCATTGGCGCTTTCCGGCGTGGTGCTGCAATCGCTTTTGCGCAATTCGCTGGCCGATCCTTATAT
TCTGGGCATTTCCGCCGGAGCTTCCACGGGGGCGGTCAGCGTTGCCATATTGGGTATCGGCGCAGGTATCCTCACTCTGT
CGTTTGGCGCTTTCATCGGCGCCATTGTGGCCTTCGCGCTTGTGGCCATGCTTGCCATGCGGGCAGGGCGGGGCAACAGC
GCGATCATTCTTGCGGGCATTGCCGGGTCGCAGCTTTTTAACGCGCTCACCTCCTTCATCGTCACAAAAGCCGCCAATGC
GGAACAGGCGCGCGGCATCATGTTCTGGCTTCTTGGCAATCTTTCCGGGGTGCGCTGGCCGGATGTTGCGCTTGCTCTTC
CCGTCTGCCTTGCCGGGCTTGCGGTCTGCCTCTGGCACGCACGCGCGCTCGATGCCTTCACTTTCGGGGCGGAATCCGCC
GCTTCGCTCGGCATTCCGGTACGCCGTATCTATGCCGTGCTGATCGGCGCAAGCGCCATGATGACGGCGGTCATGGTGTC
CATCGTCGGTTCCATAGGCTTTATTGGCCTCGTCATACCGCACGCCGCACGCATGATCGTGGGCGTGCGCCATGACGTGC
TTCTGCCAGCGGCGGCGCTGATCGGGGCGATTTTCATGATCCTCGCCGATATTCTCTCGCGCACCATCATTCCCGGTCAG
GTTCTGCCCATCGGGGTCATCACGGCGCTGTTCGGCGCACCGGCCTTTGCTTTGTTGCTGGGGCAGAAAAGGGGCCATCC
ATGA

Upstream 100 bases:

>100_bases
ATGTCTTCGATATGGATGCGCAAGCCATGAACCCGACCATCCGCACCATAGAAGGCATTGAAACGCTGGCTGATGCCATT
GCTGCCGCCGGGCTGAACAA

Downstream 100 bases:

>100_bases
TGCTTTCGGCACGCAATGTTTGCTGGGCTGCGGGGTGCGCGGAAATCCTGCATGATGTCTCGCTCGATGTGGTGAAGGGC
GAATTTCTCGGCATTATCGG

Product: hypothetical protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTVRAAAIRFSMKSRMGAGVLALVLLFVALWLGAAIGETSIPLDVVAKTVANRLWYAGYPLDPIDEGIVWSYRLSRAVVA
ACCGAALALSGVVLQSLLRNSLADPYILGISAGASTGAVSVAILGIGAGILTLSFGAFIGAIVAFALVAMLAMRAGRGNS
AIILAGIAGSQLFNALTSFIVTKAANAEQARGIMFWLLGNLSGVRWPDVALALPVCLAGLAVCLWHARALDAFTFGAESA
ASLGIPVRRIYAVLIGASAMMTAVMVSIVGSIGFIGLVIPHAARMIVGVRHDVLLPAAALIGAIFMILADILSRTIIPGQ
VLPIGVITALFGAPAFALLLGQKRGHP

Sequences:

>Translated_347_residues
MTVRAAAIRFSMKSRMGAGVLALVLLFVALWLGAAIGETSIPLDVVAKTVANRLWYAGYPLDPIDEGIVWSYRLSRAVVA
ACCGAALALSGVVLQSLLRNSLADPYILGISAGASTGAVSVAILGIGAGILTLSFGAFIGAIVAFALVAMLAMRAGRGNS
AIILAGIAGSQLFNALTSFIVTKAANAEQARGIMFWLLGNLSGVRWPDVALALPVCLAGLAVCLWHARALDAFTFGAESA
ASLGIPVRRIYAVLIGASAMMTAVMVSIVGSIGFIGLVIPHAARMIVGVRHDVLLPAAALIGAIFMILADILSRTIIPGQ
VLPIGVITALFGAPAFALLLGQKRGHP
>Mature_346_residues
TVRAAAIRFSMKSRMGAGVLALVLLFVALWLGAAIGETSIPLDVVAKTVANRLWYAGYPLDPIDEGIVWSYRLSRAVVAA
CCGAALALSGVVLQSLLRNSLADPYILGISAGASTGAVSVAILGIGAGILTLSFGAFIGAIVAFALVAMLAMRAGRGNSA
IILAGIAGSQLFNALTSFIVTKAANAEQARGIMFWLLGNLSGVRWPDVALALPVCLAGLAVCLWHARALDAFTFGAESAA
SLGIPVRRIYAVLIGASAMMTAVMVSIVGSIGFIGLVIPHAARMIVGVRHDVLLPAAALIGAIFMILADILSRTIIPGQV
LPIGVITALFGAPAFALLLGQKRGHP

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790740, Length=292, Percent_Identity=36.6438356164384, Blast_Score=145, Evalue=6e-36,
Organism=Escherichia coli, GI1788004, Length=284, Percent_Identity=37.6760563380282, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1790741, Length=286, Percent_Identity=36.3636363636364, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1786805, Length=312, Percent_Identity=34.9358974358974, Blast_Score=113, Evalue=2e-26,
Organism=Escherichia coli, GI1786804, Length=276, Percent_Identity=31.1594202898551, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786347, Length=275, Percent_Identity=27.6363636363636, Blast_Score=81, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 35607; Mature: 35476

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS00099 THIOLASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRAAAIRFSMKSRMGAGVLALVLLFVALWLGAAIGETSIPLDVVAKTVANRLWYAGYP
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCC
LDPIDEGIVWSYRLSRAVVAACCGAALALSGVVLQSLLRNSLADPYILGISAGASTGAVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
VAILGIGAGILTLSFGAFIGAIVAFALVAMLAMRAGRGNSAIILAGIAGSQLFNALTSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
VTKAANAEQARGIMFWLLGNLSGVRWPDVALALPVCLAGLAVCLWHARALDAFTFGAESA
HHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ASLGIPVRRIYAVLIGASAMMTAVMVSIVGSIGFIGLVIPHAARMIVGVRHDVLLPAAAL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIFMILADILSRTIIPGQVLPIGVITALFGAPAFALLLGQKRGHP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TVRAAAIRFSMKSRMGAGVLALVLLFVALWLGAAIGETSIPLDVVAKTVANRLWYAGYP
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHEECCCC
LDPIDEGIVWSYRLSRAVVAACCGAALALSGVVLQSLLRNSLADPYILGISAGASTGAVS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHH
VAILGIGAGILTLSFGAFIGAIVAFALVAMLAMRAGRGNSAIILAGIAGSQLFNALTSFI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHH
VTKAANAEQARGIMFWLLGNLSGVRWPDVALALPVCLAGLAVCLWHARALDAFTFGAESA
HHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ASLGIPVRRIYAVLIGASAMMTAVMVSIVGSIGFIGLVIPHAARMIVGVRHDVLLPAAAL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGAIFMILADILSRTIIPGQVLPIGVITALFGAPAFALLLGQKRGHP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]