| Definition | Brucella suis ATCC 23445 chromosome II, complete genome. |
|---|---|
| Accession | NC_010167 |
| Length | 1,400,844 |
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The map label for this gene is 163844874
Identifier: 163844874
GI number: 163844874
Start: 713868
End: 714935
Strand: Reverse
Name: 163844874
Synonym: BSUIS_B0735
Alternate gene names: NA
Gene position: 714935-713868 (Counterclockwise)
Preceding gene: 163844875
Following gene: 163844873
Centisome position: 51.04
GC content: 58.43
Gene sequence:
>1068_bases ATGCCCATTAAGCCTAAAAACATCTGCGAGGTGGATACACCTGCCATTCTGGTTGATGTTGATCGTGTGGTTGCAAATAT CGAAAAGGCACAGGCCCATGCCGATGCGGCGGGCGTGAAGCTGCGCCCGCACATCAAAACGCACAAGTTGCCATTTTTCG CAAGAATGCAGGTGAAAGCAGGCGCCGTCGGCATCACCTGCCAGAAGCTGGGTGAAGCGGAAGTCATGGCCGATGCGGGG CTGACCGATATTTTTCTGCCCTATAATATTCTGGGGCAGGAAAAGCTCGATCGGCTTCATGCGCTGCATCGGCGCATCAC GATCTCGGTCACGGTGGACAACAAGACATCGCTGGCAGGGCTTGCTCAGCATTTTATGAACGAAAAGCGGCCGCTGAAGG TTCTCGTGGAATGCGACACGGGCATGGGGCGCTGCGGTGTGCAGACGCCCGGACAGGCACGCGAATTGGCGCACATCATT GAGAAGAGCGCCGGGCTTTGCTTTGGCGGGCTTATGACCTATCCGGCCACCGGCAGGGGGGATGAGGCAGAACGCTGGCT CAGAGAAGCCCGCGACCTGCTCGCAGCCGATGGCATTGCCTGCGAGACCATTTCCAGTGGCGGCACACCGGATATGTGGC GCATTCCGGCTGAAACCGTCGTGACGGAGTATCGCCCCGGCACCTATATCTATTTCGACCGCTATCAGGTTGCCGAAGGT GCGGCGACGATTAATGATTGCGCCCTTACAGTGCTGGCGACGGTGGTGAGCCATCCGACGCCCGAGCGCGCCATCATTGA TGCCGGGTCCAAGGCGCTGTCGTCCGATACGCTGGGGCTTGCCGATTTCGGGGAATTGATGGACCGGCCGCTGGCGCGTG TGACGGGCCTCAGCGAAGAACACGGCAAGGTGACGGGCGACGTCGCCAATCTCAATATCGGCGACCGGGTGCGTGTCATT CCCGATCATGTTTGCGTCGTCTCAAATCTTTTCGATGAAGTGCACCTTGTTTCGGGCGAGGAGGTTATCGATATCCTGCC CGTCGCCGCACGCGGAAAATTAAGATAA
Upstream 100 bases:
>100_bases GCGCGAGGGCCGAAGGTGCTGGAAAGCCTGCGCCGCATCAAACACAGCCTCAATACACTTACCATAGACGATCCGCGTCT ACCGCTTGGAGACTGACTTT
Downstream 100 bases:
>100_bases TCAGGAGGATAGAATGAAGGGAGCGGTTAATCCGTTCGCAGGCGACAAGGACCGCGAGCAAATATGGGAAATGTTCGTGC GCCGCGATATCGAGGCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPIKPKNICEVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKLGEAEVMADAG LTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKRPLKVLVECDTGMGRCGVQTPGQARELAHII EKSAGLCFGGLMTYPATGRGDEAERWLREARDLLAADGIACETISSGGTPDMWRIPAETVVTEYRPGTYIYFDRYQVAEG AATINDCALTVLATVVSHPTPERAIIDAGSKALSSDTLGLADFGELMDRPLARVTGLSEEHGKVTGDVANLNIGDRVRVI PDHVCVVSNLFDEVHLVSGEEVIDILPVAARGKLR
Sequences:
>Translated_355_residues MPIKPKNICEVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKLGEAEVMADAG LTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKRPLKVLVECDTGMGRCGVQTPGQARELAHII EKSAGLCFGGLMTYPATGRGDEAERWLREARDLLAADGIACETISSGGTPDMWRIPAETVVTEYRPGTYIYFDRYQVAEG AATINDCALTVLATVVSHPTPERAIIDAGSKALSSDTLGLADFGELMDRPLARVTGLSEEHGKVTGDVANLNIGDRVRVI PDHVCVVSNLFDEVHLVSGEEVIDILPVAARGKLR >Mature_354_residues PIKPKNICEVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKAGAVGITCQKLGEAEVMADAGL TDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAGLAQHFMNEKRPLKVLVECDTGMGRCGVQTPGQARELAHIIE KSAGLCFGGLMTYPATGRGDEAERWLREARDLLAADGIACETISSGGTPDMWRIPAETVVTEYRPGTYIYFDRYQVAEGA ATINDCALTVLATVVSHPTPERAIIDAGSKALSSDTLGLADFGELMDRPLARVTGLSEEHGKVTGDVANLNIGDRVRVIP DHVCVVSNLFDEVHLVSGEEVIDILPVAARGKLR
Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine
COG id: COG3616
COG function: function code E; Predicted amino acid aldolase or racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DSD1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001608 [H]
Pfam domain/function: PF01168 Ala_racemase_N [H]
EC number: =4.1.2.42 [H]
Molecular weight: Translated: 38372; Mature: 38240
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKPKNICEVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKA CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEEEC GAVGITCQKLGEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAG CEEEEEHHHCCCHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHCEEEEEEEECCCHHHHH LAQHFMNEKRPLKVLVECDTGMGRCGVQTPGQARELAHIIEKSAGLCFGGLMTYPATGRG HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCC DEAERWLREARDLLAADGIACETISSGGTPDMWRIPAETVVTEYRPGTYIYFDRYQVAEG CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHCCCCCEEEEEECEEECCC AATINDCALTVLATVVSHPTPERAIIDAGSKALSSDTLGLADFGELMDRPLARVTGLSEE CCHHHHHHHHHHHHHHCCCCCCHHEECCCCHHHCCCCCCHHHHHHHHHCHHHHHCCCCHH HGKVTGDVANLNIGDRVRVIPDHVCVVSNLFDEVHLVSGEEVIDILPVAARGKLR CCCEECEEEECCCCCEEEECCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCC >Mature Secondary Structure PIKPKNICEVDTPAILVDVDRVVANIEKAQAHADAAGVKLRPHIKTHKLPFFARMQVKA CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCEEEEEEEEC GAVGITCQKLGEAEVMADAGLTDIFLPYNILGQEKLDRLHALHRRITISVTVDNKTSLAG CEEEEEHHHCCCHHHHHCCCCCEEECCHHHCCHHHHHHHHHHHCEEEEEEEECCCHHHHH LAQHFMNEKRPLKVLVECDTGMGRCGVQTPGQARELAHIIEKSAGLCFGGLMTYPATGRG HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEECHHHCCCCCCCC DEAERWLREARDLLAADGIACETISSGGTPDMWRIPAETVVTEYRPGTYIYFDRYQVAEG CHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEECCHHHHHHCCCCCEEEEEECEEECCC AATINDCALTVLATVVSHPTPERAIIDAGSKALSSDTLGLADFGELMDRPLARVTGLSEE CCHHHHHHHHHHHHHHCCCCCCHHEECCCCHHHCCCCCCHHHHHHHHHCHHHHHCCCCHH HGKVTGDVANLNIGDRVRVIPDHVCVVSNLFDEVHLVSGEEVIDILPVAARGKLR CCCEECEEEECCCCCEEEECCHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9642221 [H]