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The map label for this gene is adrA [H]

Identifier: 163844769

GI number: 163844769

Start: 605313

End: 606026

Strand: Reverse

Name: adrA [H]

Synonym: BSUIS_B0615

Alternate gene names: 163844769

Gene position: 606026-605313 (Counterclockwise)

Preceding gene: 163844770

Following gene: 163844766

Centisome position: 43.26

GC content: 50.56

Gene sequence:

>714_bases
TTGCAATTACCATCGGGTAATGTTTGGAGGCGCACGGTAATTGTAGCCGTGATAGCAACGATCATATCGATATCGTTGTC
GACCGGGATTCGTTTCGCGCTTGGAGTGAAATCTGACACGGTTACGATCTTGGTCAGGTTGCTGTTGCCGTTTCTGATTG
CAATGCCGTTGGGGGGTTTCTGGTTTTCACGATTAGAAGAGCTGGAGCGGTCTTATCGGACCGCGGTCAAAAGAGCCAAT
GAGCTGGCGCGGGTGGCGAGTGTCGATCCGCTAACGGGCCTGCTTAACCGTCGGAGCTTCATCCAGCAGTTTAATGCTGC
AAATAAGGCGGGTGCTCGTGGTTGGTTTTTAATCGTAGACGTTGATTATCTGAAGCAGATCAATGACCAATATGGCCATC
CAGCCGGCGACGATGCGATAATCGCGGTAGCTCAAGCATTGGAAGATTGTTTATCCAGCGACAGCCTGATTGCTCGCATC
GGTGGTGACGAATTCTGTGCATTCGTACCGAAGGGAGCGATCAACGACGTTGATAGCGTTCTTTCGGACATCAGTTTGAG
AGCAGATGGGCTGCTGCGGGAGAAAAGGCCCAATGTCGGAAGTTCTTTGACTGTTTCAGTCGGCCGCATCTCCTGTAAGA
CAGGGCAGATATTCGAGGAAGTCCTGTCAATCGCGGATGAACAACTCTATCGAAAGAAAAGTCAAAGGCAGTAA

Upstream 100 bases:

>100_bases
ACGGACCAGTAAATATAAAGGCAGCTACATTATGTTGGTTGCAGTAACAATTGGTAGGCGTTAATCCGTCAGGGGTTTCC
TCTCCTAAAGGATGGCTGGT

Downstream 100 bases:

>100_bases
TGATATTTAGAGCGAGGCTCCCGAAAGTGGGAACCGTCTCTGCGAGGAAATCAGTTAACCGGGATGATTTCTGATCCCGT
TTCGATGCGTTGGAAAATGC

Product: diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MQLPSGNVWRRTVIVAVIATIISISLSTGIRFALGVKSDTVTILVRLLLPFLIAMPLGGFWFSRLEELERSYRTAVKRAN
ELARVASVDPLTGLLNRRSFIQQFNAANKAGARGWFLIVDVDYLKQINDQYGHPAGDDAIIAVAQALEDCLSSDSLIARI
GGDEFCAFVPKGAINDVDSVLSDISLRADGLLREKRPNVGSSLTVSVGRISCKTGQIFEEVLSIADEQLYRKKSQRQ

Sequences:

>Translated_237_residues
MQLPSGNVWRRTVIVAVIATIISISLSTGIRFALGVKSDTVTILVRLLLPFLIAMPLGGFWFSRLEELERSYRTAVKRAN
ELARVASVDPLTGLLNRRSFIQQFNAANKAGARGWFLIVDVDYLKQINDQYGHPAGDDAIIAVAQALEDCLSSDSLIARI
GGDEFCAFVPKGAINDVDSVLSDISLRADGLLREKRPNVGSSLTVSVGRISCKTGQIFEEVLSIADEQLYRKKSQRQ
>Mature_237_residues
MQLPSGNVWRRTVIVAVIATIISISLSTGIRFALGVKSDTVTILVRLLLPFLIAMPLGGFWFSRLEELERSYRTAVKRAN
ELARVASVDPLTGLLNRRSFIQQFNAANKAGARGWFLIVDVDYLKQINDQYGHPAGDDAIIAVAQALEDCLSSDSLIARI
GGDEFCAFVPKGAINDVDSVLSDISLRADGLLREKRPNVGSSLTVSVGRISCKTGQIFEEVLSIADEQLYRKKSQRQ

Specific function: Unknown

COG id: COG2199

COG function: function code T; FOG: GGDEF domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

Organism=Escherichia coli, GI1786584, Length=228, Percent_Identity=27.1929824561404, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI87081881, Length=166, Percent_Identity=32.5301204819277, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI145693134, Length=147, Percent_Identity=33.3333333333333, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1787262, Length=242, Percent_Identity=24.3801652892562, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787056, Length=180, Percent_Identity=29.4444444444444, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI87081974, Length=181, Percent_Identity=27.0718232044199, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788956, Length=182, Percent_Identity=31.3186813186813, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87082007, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787802, Length=161, Percent_Identity=30.4347826086957, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787541, Length=167, Percent_Identity=30.5389221556886, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788381, Length=98, Percent_Identity=36.734693877551, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR007894 [H]

Pfam domain/function: PF00990 GGDEF; PF05230 MASE2 [H]

EC number: NA

Molecular weight: Translated: 25996; Mature: 25996

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPSGNVWRRTVIVAVIATIISISLSTGIRFALGVKSDTVTILVRLLLPFLIAMPLGGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHH
WFSRLEELERSYRTAVKRANELARVASVDPLTGLLNRRSFIQQFNAANKAGARGWFLIVD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
VDYLKQINDQYGHPAGDDAIIAVAQALEDCLSSDSLIARIGGDEFCAFVPKGAINDVDSV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHH
LSDISLRADGLLREKRPNVGSSLTVSVGRISCKTGQIFEEVLSIADEQLYRKKSQRQ
HHHHHHHHHHHHHHCCCCCCCEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLPSGNVWRRTVIVAVIATIISISLSTGIRFALGVKSDTVTILVRLLLPFLIAMPLGGF
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCHH
WFSRLEELERSYRTAVKRANELARVASVDPLTGLLNRRSFIQQFNAANKAGARGWFLIVD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEE
VDYLKQINDQYGHPAGDDAIIAVAQALEDCLSSDSLIARIGGDEFCAFVPKGAINDVDSV
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCCCHHHHHHH
LSDISLRADGLLREKRPNVGSSLTVSVGRISCKTGQIFEEVLSIADEQLYRKKSQRQ
HHHHHHHHHHHHHHCCCCCCCEEEEEECEEECCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]