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The map label for this gene is trbJ [H]

Identifier: 163844543

GI number: 163844543

Start: 350955

End: 351746

Strand: Reverse

Name: trbJ [H]

Synonym: BSUIS_B0372

Alternate gene names: 163844543

Gene position: 351746-350955 (Counterclockwise)

Preceding gene: 163844545

Following gene: 163844542

Centisome position: 25.11

GC content: 57.32

Gene sequence:

>792_bases
ATGGAAATGGAATCGCAAAAAACGTCGGCTTATGCTGCCCGAAAATTCGGTCGAGACGCGGCGCTCGCTCTAGCAATGGC
AAGCGCAGGCCTTGGTGTAAGTCTCTACATGGCACCGGCTCCGGCCTATGCCATCTACTGCTCGAACTGCTCGACGTTCT
ATCAGCAGATGTACGAGTACGCCGAAGCGGTGAATACGCAACTGAACACCGCGCAGCAGTTGCAGACGCAGATACAGCAG
TACGACAACATGATTAAGCAGGGCATGTCGCTGCCCAGCCACATGTTCAACACCATCACAGGCGACCTCCAGCGCGTGGC
CAGCGTCTACAACTCGGCGCAGTCGCTCGGCCGCAACATCAGCAATCTGGACGAACAGTTTCGCCAGCAGTTCAAGGGCT
ATGACAGCTATCTGAACTCGATTGGCCAAGGGCAAAACAACATGCCGCAGCGCTATCGGGACTGGGCACAATCCGGCTTC
GATAACGCCCGCACGGCCATGCAGGCCGCTGGCGTAAATACCAGCACATTCGAGGATGAGAACGCGCTGCTGGATCAGTT
GGTGAGCCGTTCGCAGTCGGCCATTGGCCGTCAGCAGGCCATTCAAGCCGGGAACGAGATTGCGGCGCAGAACGTGCAGC
AGCTCCAGAAGCTGCGCGATCTGGTAGCCACACAAATCACACTGCAAGGCAACTACATGGCGCAGCAAAACGAACGACAG
TCCGTTAGCGATGCCTCCGAACAGCAATTCCGCAGCCGTGAAAATACACGCGGCCCGTCTGAGGGGTTCTGA

Upstream 100 bases:

>100_bases
CATTGAATTATATTCGGATACAAGATTATCCGCATATTTAAAACCGCTCCATATCGGTCAATAATTAAACCTCGGATGAT
GACAAAATGAGGTATGCGGT

Downstream 100 bases:

>100_bases
CTATGCGACGTACAACCGTTTTCGCACTTGTCGGCGCAGTGCTCTTGCTATCTGCAACTAGTGCGATGGCTGCCGGGGTC
GATTTGGCGCAGAGCAACAC

Product: P-type conjugative transfer protein TrbJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MEMESQKTSAYAARKFGRDAALALAMASAGLGVSLYMAPAPAYAIYCSNCSTFYQQMYEYAEAVNTQLNTAQQLQTQIQQ
YDNMIKQGMSLPSHMFNTITGDLQRVASVYNSAQSLGRNISNLDEQFRQQFKGYDSYLNSIGQGQNNMPQRYRDWAQSGF
DNARTAMQAAGVNTSTFEDENALLDQLVSRSQSAIGRQQAIQAGNEIAAQNVQQLQKLRDLVATQITLQGNYMAQQNERQ
SVSDASEQQFRSRENTRGPSEGF

Sequences:

>Translated_263_residues
MEMESQKTSAYAARKFGRDAALALAMASAGLGVSLYMAPAPAYAIYCSNCSTFYQQMYEYAEAVNTQLNTAQQLQTQIQQ
YDNMIKQGMSLPSHMFNTITGDLQRVASVYNSAQSLGRNISNLDEQFRQQFKGYDSYLNSIGQGQNNMPQRYRDWAQSGF
DNARTAMQAAGVNTSTFEDENALLDQLVSRSQSAIGRQQAIQAGNEIAAQNVQQLQKLRDLVATQITLQGNYMAQQNERQ
SVSDASEQQFRSRENTRGPSEGF
>Mature_263_residues
MEMESQKTSAYAARKFGRDAALALAMASAGLGVSLYMAPAPAYAIYCSNCSTFYQQMYEYAEAVNTQLNTAQQLQTQIQQ
YDNMIKQGMSLPSHMFNTITGDLQRVASVYNSAQSLGRNISNLDEQFRQQFKGYDSYLNSIGQGQNNMPQRYRDWAQSGF
DNARTAMQAAGVNTSTFEDENALLDQLVSRSQSAIGRQQAIQAGNEIAAQNVQQLQKLRDLVATQITLQGNYMAQQNERQ
SVSDASEQQFRSRENTRGPSEGF

Specific function: Unknown

COG id: COG5314

COG function: function code U; Conjugal transfer/entry exclusion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.tumefaciens Ti plasmid trbJ [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014147 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29283; Mature: 29283

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMESQKTSAYAARKFGRDAALALAMASAGLGVSLYMAPAPAYAIYCSNCSTFYQQMYEY
CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCHHEEECCHHHHHHHHHHH
AEAVNTQLNTAQQLQTQIQQYDNMIKQGMSLPSHMFNTITGDLQRVASVYNSAQSLGRNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SNLDEQFRQQFKGYDSYLNSIGQGQNNMPQRYRDWAQSGFDNARTAMQAAGVNTSTFEDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH
NALLDQLVSRSQSAIGRQQAIQAGNEIAAQNVQQLQKLRDLVATQITLQGNYMAQQNERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVSDASEQQFRSRENTRGPSEGF
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEMESQKTSAYAARKFGRDAALALAMASAGLGVSLYMAPAPAYAIYCSNCSTFYQQMYEY
CCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCEEEEECCCCCHHEEECCHHHHHHHHHHH
AEAVNTQLNTAQQLQTQIQQYDNMIKQGMSLPSHMFNTITGDLQRVASVYNSAQSLGRNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SNLDEQFRQQFKGYDSYLNSIGQGQNNMPQRYRDWAQSGFDNARTAMQAAGVNTSTFEDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHH
NALLDQLVSRSQSAIGRQQAIQAGNEIAAQNVQQLQKLRDLVATQITLQGNYMAQQNERQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
SVSDASEQQFRSRENTRGPSEGF
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]