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The map label for this gene is trbL [H]

Identifier: 163844542

GI number: 163844542

Start: 349309

End: 350952

Strand: Reverse

Name: trbL [H]

Synonym: BSUIS_B0371

Alternate gene names: 163844542

Gene position: 350952-349309 (Counterclockwise)

Preceding gene: 163844543

Following gene: 163844541

Centisome position: 25.05

GC content: 61.25

Gene sequence:

>1644_bases
ATGCGACGTACAACCGTTTTCGCACTTGTCGGCGCAGTGCTCTTGCTATCTGCAACTAGTGCGATGGCTGCCGGGGTCGA
TTTGGCGCAGAGCAACACGTCTATGAACAGCCTTCTGCGGCTGATTCAGAACGCTTCAAACCAATGGGCACCGCGCCTGC
ATGACTACGCCTTGTGGCTCTTGGGATGCCTTACCGTCATCCAGTTAGTTTGGACTTTTGCTCCTTTGGTCATGCGCGGA
GCTGAACTGGGCGACCTCCTCCATGAGCTGGTGAAATACATCCTCGTGATAGGGTTCTTTTATGCGATGCTCGATCACGC
GACCGAGTGGGGCGGGGCCATCGTCAACAGCTTCCGGCAGGCCGGGGCGCACGCGGCAGGGTTGGGTAGTGCGGAGCTGA
TGCCGGGGGATATGTTCTCAACTGCTGTGGACTTTTCACGGCAGGTGTTGACGGCCGGTGTGTCGATGTTCAGCCCAATC
ACATCGGTTGTAGTGGCCGTATCTGCATTGATCGTCCTGATGTGTTTCACGTTTATAGCGGCTCTGGTGTTCGTGACGCT
CGTAGAGGCCTACGTCATCATCAATGCCGCCGTCCTGTTCATGGGTTTCGGTGGCTCTCAATGGACACGCGAATATGCAC
TGGCTCCCATTCGCTATGCCGTTGCGGTAGGTGCCAAGCTGTTTGTCCTGACTCTGATTGTGGGTCTGATCATGCAGGTT
TCCGCAGAATCGTCGGCAGCCTACACCAACGACGAAGCGTCGTTGATGACCTTGGTCGGCCTGTCTTTGGTGTGCGCCTA
CCTGACCAAAACCATCCCTGAACTGATCGGCGGCATGATTAGCGGCACGTCGATGGGCGGCGGCTCTGCAATTGGGGGCA
TGGCCGCAGCCGGTGCAGCCGGTGCGGCGGCCGCAATCGCTACTGTTGCAACATCTGGGGCAGCAGCCCCGGCTGCTGGA
GCACTAGGGGCCGCGGGAACTGGCGGAGGCGCTGCCAGTGCCGCGGGTGGTGGACTGGCCTCCGCATTGAACGCCAGCAT
GGCAGGCGGCAGTACCGCAGGGGGCATCGGCGGTGCGACGGGCGTCGGCAGCGCTGGAATTGGCGCAAGCACAGGAGGGG
GCAGCGGTGCGACCGCAAAGGCCGCAGGTTCTCGCGTCGGGGGTGGTGCCGCGTCAGGATCGGCGAATCCAGTGTCGGCG
GCCGCTTCGCCTGCTAGCCAAGAATCAGGCAGCGGCTTGAAGCAAGCCGCCAAACAGGCCGGAAAAGCTGCGAAGGGTGG
TGACGACGATATGGATCAGCAAGCCGTCGCGCAGCAACGGCAGATGACACCAAAAGAAGGGACTGGCGGCAACGGCAAGA
CTGTTGCGCAGGGCGCCGAGGTGGCCACACGGGCGCTTGGCGTGCTGGGCGCTATCAGCGTACCCGGCATGGAAAGCTCC
CACGGGCTTTCGCTCGGGGGCACCGGATCTCCCCCTCCAGTCCCCGGCAGTGACAGTCCAGCGTCTGATGACGGCGCTGA
GTCGACTGCACAAGCGGAATCCAACATTATTCGTCCGGCATCGGACACCACTAGCACCGGAGACGTCGGCGCGCTCAATG
TGCCCGGCATGGCCTCTAGTGTTAACTCTCAATCGGAGACGTAA

Upstream 100 bases:

>100_bases
ACATGGCGCAGCAAAACGAACGACAGTCCGTTAGCGATGCCTCCGAACAGCAATTCCGCAGCCGTGAAAATACACGCGGC
CCGTCTGAGGGGTTCTGACT

Downstream 100 bases:

>100_bases
TCATGATGAACGATATATTTTTTGGCCTGATGATGCTCGGTGGCTTTTTTGTTCTCGGTATTGGTATGTGGGCGCTTGGC
CAATGGCTGCGGCGCAAAGG

Product: P-type conjugative transfer protein TrbL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 547; Mature: 547

Protein sequence:

>547_residues
MRRTTVFALVGAVLLLSATSAMAAGVDLAQSNTSMNSLLRLIQNASNQWAPRLHDYALWLLGCLTVIQLVWTFAPLVMRG
AELGDLLHELVKYILVIGFFYAMLDHATEWGGAIVNSFRQAGAHAAGLGSAELMPGDMFSTAVDFSRQVLTAGVSMFSPI
TSVVVAVSALIVLMCFTFIAALVFVTLVEAYVIINAAVLFMGFGGSQWTREYALAPIRYAVAVGAKLFVLTLIVGLIMQV
SAESSAAYTNDEASLMTLVGLSLVCAYLTKTIPELIGGMISGTSMGGGSAIGGMAAAGAAGAAAAIATVATSGAAAPAAG
ALGAAGTGGGAASAAGGGLASALNASMAGGSTAGGIGGATGVGSAGIGASTGGGSGATAKAAGSRVGGGAASGSANPVSA
AASPASQESGSGLKQAAKQAGKAAKGGDDDMDQQAVAQQRQMTPKEGTGGNGKTVAQGAEVATRALGVLGAISVPGMESS
HGLSLGGTGSPPPVPGSDSPASDDGAESTAQAESNIIRPASDTTSTGDVGALNVPGMASSVNSQSET

Sequences:

>Translated_547_residues
MRRTTVFALVGAVLLLSATSAMAAGVDLAQSNTSMNSLLRLIQNASNQWAPRLHDYALWLLGCLTVIQLVWTFAPLVMRG
AELGDLLHELVKYILVIGFFYAMLDHATEWGGAIVNSFRQAGAHAAGLGSAELMPGDMFSTAVDFSRQVLTAGVSMFSPI
TSVVVAVSALIVLMCFTFIAALVFVTLVEAYVIINAAVLFMGFGGSQWTREYALAPIRYAVAVGAKLFVLTLIVGLIMQV
SAESSAAYTNDEASLMTLVGLSLVCAYLTKTIPELIGGMISGTSMGGGSAIGGMAAAGAAGAAAAIATVATSGAAAPAAG
ALGAAGTGGGAASAAGGGLASALNASMAGGSTAGGIGGATGVGSAGIGASTGGGSGATAKAAGSRVGGGAASGSANPVSA
AASPASQESGSGLKQAAKQAGKAAKGGDDDMDQQAVAQQRQMTPKEGTGGNGKTVAQGAEVATRALGVLGAISVPGMESS
HGLSLGGTGSPPPVPGSDSPASDDGAESTAQAESNIIRPASDTTSTGDVGALNVPGMASSVNSQSET
>Mature_547_residues
MRRTTVFALVGAVLLLSATSAMAAGVDLAQSNTSMNSLLRLIQNASNQWAPRLHDYALWLLGCLTVIQLVWTFAPLVMRG
AELGDLLHELVKYILVIGFFYAMLDHATEWGGAIVNSFRQAGAHAAGLGSAELMPGDMFSTAVDFSRQVLTAGVSMFSPI
TSVVVAVSALIVLMCFTFIAALVFVTLVEAYVIINAAVLFMGFGGSQWTREYALAPIRYAVAVGAKLFVLTLIVGLIMQV
SAESSAAYTNDEASLMTLVGLSLVCAYLTKTIPELIGGMISGTSMGGGSAIGGMAAAGAAGAAAAIATVATSGAAAPAAG
ALGAAGTGGGAASAAGGGLASALNASMAGGSTAGGIGGATGVGSAGIGASTGGGSGATAKAAGSRVGGGAASGSANPVSA
AASPASQESGSGLKQAAKQAGKAAKGGDDDMDQQAVAQQRQMTPKEGTGGNGKTVAQGAEVATRALGVLGAISVPGMESS
HGLSLGGTGSPPPVPGSDSPASDDGAESTAQAESNIIRPASDTTSTGDVGALNVPGMASSVNSQSET

Specific function: Unknown

COG id: COG3846

COG function: function code U; Type IV secretory pathway, TrbL components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbL/virB6 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014150
- InterPro:   IPR007688 [H]

Pfam domain/function: PF04610 TrbL [H]

EC number: NA

Molecular weight: Translated: 53402; Mature: 53402

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]