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The map label for this gene is yngJ [H]

Identifier: 163844406

GI number: 163844406

Start: 207587

End: 208729

Strand: Reverse

Name: yngJ [H]

Synonym: BSUIS_B0224

Alternate gene names: 163844406

Gene position: 208729-207587 (Counterclockwise)

Preceding gene: 163844407

Following gene: 163844405

Centisome position: 14.9

GC content: 58.09

Gene sequence:

>1143_bases
ATGATCCGCGACCCGGAAATACTTGAAATTCTGCGCGACACTGTCAGCCAGTTCGTTTCGGAAACGCTCATCCCCAGGGA
GAACGAAGTCGCCGAAACAAACGCCATTCCGGCCGATATCATTGCGCAGATGAAGGAGCTTGGCTTCTTCGGCCTCACCA
TCCCGGAAGAATTCGGCGGGCTTGGCCTGACGATGGAAGAAGAGGTGAATGTCGCGTTTGAACTGGGGCGGGCTTCGCCT
GCCTTCCGTTCCTATATCGGAACGAATAACGGTATCGGGTCAATCGGCATTCTCATCGACGGCACGGATGAGCAGAAGCG
CAATTATCTGCCCAGGCTCGCCAGCGGTGAGTTGCTCAGCTCCTTCTGCCTGACCGAGCCGGATGCAGGCTCGGATGCAG
CCTCGCTGAAAACCACGGCCGTGCGCGACGGCGATTTCTATATTCTCAACGGAACCAAACGTTTCATCACCAATGCGCCG
ATCGCGGATATCTTCACCGTGATGGCCCGCACGGCGGCGGATGTCAAAGGGGCAGACGGGATCAGCGCCTTTATCGTTGA
GCGCAACAGCCCCGGCCTTTCGCTTGGCAAGCCTGACCAGAAAATGGGCCAGAAAGGCGCGCTCACCAGCGATGTCATCT
TCGAGAATGTCCGGGTTCCGGCCAGCCAGTTGATCGGCGGCGTCGAAGGAAAAGGCTTCAAGACGGCAATGAAGGTGCTG
GACAAGGGACGCCTGCATATTGCGGCGCTCAGCACCGGAGCCGCCGAACGTATGCTTGCCGATACGCTGGATCGCAAGCA
ATTCGGCAAGCCGATTGCCGATTTCCAGCTTATTCAAGCCATGCTCGCGGACAGCAAGGCAGAGATTTATGCCGCCAAAT
GCATGGTTCTCGATGCGGCGCGCAAGCGCGACAGCGGGCAGAACGTCAGCACCGAGGCTTCCTGCGCCAAGATGTTTGCA
ACGGAAATGTGCGGCCGGGTTGCCGACCGCTGCGTGCAGATACATGGCGGCGCCGGTTATGTCAGCGAATATGCGATCGA
GCGTTTCTACCGCGATGTTCGCCTTTTCCGCATTTACGAGGGAACGACCCAGATCCAGCAGATCGTCATCGCAAGAAACA
TGATCCGCGAAGCCCGGCGCTAA

Upstream 100 bases:

>100_bases
GCCTGATCGAGATGGTTCACAACATCAGCTCCGCTGTCCCGTAATCTGCCGGAAAGCGGAGCCTTGCAGAAAAGGCCGGC
AACGGCCGCTAGGAGAATGC

Downstream 100 bases:

>100_bases
CCGGACTTTTCAATGAACCGGCATTCGGACAGTGGCGCGGCGATGGTCGTGCAACTGAACGATGGGAGTATGCCTTCTGA
GGAGCACGCGCAGAACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MIRDPEILEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTEPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCAKMFA
TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR

Sequences:

>Translated_380_residues
MIRDPEILEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTEPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCAKMFA
TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR
>Mature_380_residues
MIRDPEILEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGGLGLTMEEEVNVAFELGRASP
AFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLSSFCLTEPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAP
IADIFTVMARTAADVKGADGISAFIVERNSPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVL
DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAARKRDSGQNVSTEASCAKMFA
TEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYEGTTQIQQIVIARNMIREARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI76496475, Length=377, Percent_Identity=40.3183023872679, Blast_Score=263, Evalue=3e-70,
Organism=Homo sapiens, GI4557235, Length=377, Percent_Identity=40.3183023872679, Blast_Score=262, Evalue=3e-70,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=38.8586956521739, Blast_Score=251, Evalue=7e-67,
Organism=Homo sapiens, GI187960098, Length=368, Percent_Identity=38.0434782608696, Blast_Score=250, Evalue=1e-66,
Organism=Homo sapiens, GI4557231, Length=368, Percent_Identity=38.0434782608696, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI21361497, Length=379, Percent_Identity=38.7862796833773, Blast_Score=249, Evalue=3e-66,
Organism=Homo sapiens, GI4501859, Length=369, Percent_Identity=35.5013550135501, Blast_Score=249, Evalue=4e-66,
Organism=Homo sapiens, GI4557233, Length=379, Percent_Identity=37.2031662269129, Blast_Score=243, Evalue=2e-64,
Organism=Homo sapiens, GI226958412, Length=369, Percent_Identity=35.7723577235772, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI226958414, Length=371, Percent_Identity=35.0404312668464, Blast_Score=224, Evalue=9e-59,
Organism=Homo sapiens, GI4501857, Length=387, Percent_Identity=35.4005167958656, Blast_Score=221, Evalue=6e-58,
Organism=Homo sapiens, GI4503943, Length=388, Percent_Identity=33.2474226804124, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI7669494, Length=376, Percent_Identity=33.2446808510638, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI48976061, Length=388, Percent_Identity=29.3814432989691, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI211971008, Length=388, Percent_Identity=29.3814432989691, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI38505218, Length=394, Percent_Identity=28.4263959390863, Blast_Score=140, Evalue=2e-33,
Organism=Escherichia coli, GI87081958, Length=378, Percent_Identity=32.8042328042328, Blast_Score=151, Evalue=7e-38,
Organism=Escherichia coli, GI1786223, Length=385, Percent_Identity=30.1298701298701, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI87081702, Length=299, Percent_Identity=30.4347826086957, Blast_Score=101, Evalue=9e-23,
Organism=Escherichia coli, GI87082384, Length=296, Percent_Identity=26.6891891891892, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17570075, Length=371, Percent_Identity=38.8140161725067, Blast_Score=254, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI71985184, Length=366, Percent_Identity=40.4371584699454, Blast_Score=254, Evalue=5e-68,
Organism=Caenorhabditis elegans, GI17506239, Length=365, Percent_Identity=38.6301369863014, Blast_Score=246, Evalue=1e-65,
Organism=Caenorhabditis elegans, GI17508101, Length=363, Percent_Identity=37.7410468319559, Blast_Score=245, Evalue=4e-65,
Organism=Caenorhabditis elegans, GI17569725, Length=378, Percent_Identity=37.3015873015873, Blast_Score=242, Evalue=2e-64,
Organism=Caenorhabditis elegans, GI17534899, Length=367, Percent_Identity=37.0572207084469, Blast_Score=241, Evalue=4e-64,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=33.5106382978723, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17538396, Length=382, Percent_Identity=32.7225130890052, Blast_Score=218, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI71985192, Length=313, Percent_Identity=40.2555910543131, Blast_Score=204, Evalue=6e-53,
Organism=Caenorhabditis elegans, GI71990804, Length=293, Percent_Identity=36.518771331058, Blast_Score=176, Evalue=1e-44,
Organism=Caenorhabditis elegans, GI17534353, Length=362, Percent_Identity=31.2154696132597, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI32563615, Length=233, Percent_Identity=41.6309012875536, Blast_Score=168, Evalue=5e-42,
Organism=Caenorhabditis elegans, GI17505929, Length=384, Percent_Identity=30.2083333333333, Blast_Score=160, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17551932, Length=377, Percent_Identity=28.3819628647215, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI17531909, Length=245, Percent_Identity=35.9183673469388, Blast_Score=150, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=34.2007434944238, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17562446, Length=360, Percent_Identity=31.6666666666667, Blast_Score=135, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI17531913, Length=174, Percent_Identity=32.7586206896552, Blast_Score=93, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI86563381, Length=286, Percent_Identity=25.1748251748252, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=286, Percent_Identity=25.1748251748252, Blast_Score=68, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24660351, Length=375, Percent_Identity=38.4, Blast_Score=257, Evalue=9e-69,
Organism=Drosophila melanogaster, GI24666513, Length=368, Percent_Identity=36.9565217391304, Blast_Score=245, Evalue=4e-65,
Organism=Drosophila melanogaster, GI21356377, Length=376, Percent_Identity=38.031914893617, Blast_Score=240, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24646207, Length=377, Percent_Identity=37.1352785145889, Blast_Score=238, Evalue=4e-63,
Organism=Drosophila melanogaster, GI281363737, Length=346, Percent_Identity=39.0173410404624, Blast_Score=237, Evalue=1e-62,
Organism=Drosophila melanogaster, GI21355753, Length=376, Percent_Identity=32.7127659574468, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI19920834, Length=371, Percent_Identity=32.6145552560647, Blast_Score=163, Evalue=1e-40,
Organism=Drosophila melanogaster, GI24652780, Length=365, Percent_Identity=23.5616438356164, Blast_Score=79, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 41357; Mature: 41357

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDPEILEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCEECCCHHHHCC
LGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLS
CCCEEHHCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHH
SFCLTEPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADG
HHHCCCCCCCCCHHHCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC
ISAFIVERNSPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVL
CEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHH
DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAA
HCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RKRDSGQNVSTEASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHEEEEC
GTTQIQQIVIARNMIREARR
CHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRDPEILEILRDTVSQFVSETLIPRENEVAETNAIPADIIAQMKELGFFGLTIPEEFGG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCCEECCCHHHHCC
LGLTMEEEVNVAFELGRASPAFRSYIGTNNGIGSIGILIDGTDEQKRNYLPRLASGELLS
CCCEEHHCCCEEEEECCCCHHHHHHHCCCCCCCEEEEEEECCCHHHHHCCCCCCCHHHHH
SFCLTEPDAGSDAASLKTTAVRDGDFYILNGTKRFITNAPIADIFTVMARTAADVKGADG
HHHCCCCCCCCCHHHCCCEEEECCCEEEECCCHHHHCCCCHHHHHHHHHHHHHCCCCCCC
ISAFIVERNSPGLSLGKPDQKMGQKGALTSDVIFENVRVPASQLIGGVEGKGFKTAMKVL
CEEEEEECCCCCCCCCCCHHHHCCCCCCHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHH
DKGRLHIAALSTGAAERMLADTLDRKQFGKPIADFQLIQAMLADSKAEIYAAKCMVLDAA
HCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
RKRDSGQNVSTEASCAKMFATEMCGRVADRCVQIHGGAGYVSEYAIERFYRDVRLFRIYE
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHEEEEC
GTTQIQQIVIARNMIREARR
CHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]