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The map label for this gene is ycbL [C]

Identifier: 16273550

GI number: 16273550

Start: 1732513

End: 1733151

Strand: Reverse

Name: ycbL [C]

Synonym: HI1663

Alternate gene names: 16273550

Gene position: 1733151-1732513 (Counterclockwise)

Preceding gene: 30995468

Following gene: 30995467

Centisome position: 94.7

GC content: 37.56

Gene sequence:

>639_bases
ATGAATATCGAAATTATCCCCGTTACCGCATTCCAACAAAATTGTTCTTTGATTTGGGATGATGAAAAAAATGCCGCAAT
TATTGACCCAGGTGGCGAAGCCGAACGCCTAATTCAACGCATTGAAGAACTAGATTTAAATCTTAAAGTGCTTTTGCTTA
CCCATGGTCATTTAGATCATGTTGGCGCAGCGATGCAATTAAAACAACATTTTGGCGTTGAAATTTGGGGTTCTAATGAA
AAAGATAAATTTTTATTTGAGAGTTTACCCGAGCAAGCACAACGTTTTGGCTTGCCAAATATTGACGCTTTTTTGCCTGA
TCGTTGGTTTAATCAAGAGGGCGAAATTTTAAAATTAGATGGCTTTAATTTCGAGATTTTACATTTACCAGGGCATACAC
CAGGACATATCGGTTTTATTGAACACGAGAAAAAAGTGGCGTTTACGGGCGATGTATTATTTCAAGGCGGAATTGGTCGT
ACCGATTTCCCTCGCGGGGATTATGAAACATTGATTTCTTCAATTCGAACAAAATTACTCCCATTAAATGACGATATTAT
TATTATCGCTGGACACGGATCTTACACAACCATTGGGCAAGAAAAGCGGAGCAATCCATTTTTAAATTCTAAATCCTAA

Upstream 100 bases:

>100_bases
ATTGCAGAAACTAGCTGAATTAAAGTCTTTGCCATTACATTCTGTTCAAAAGCAAATCCTTTTGAATACTCAACAGTTTT
ATCGATTATAAGGAGCAAAA

Downstream 100 bases:

>100_bases
ATTTTAATACAAGTAAAAATAACCGCACTTTGTTTAAGAGATGAAGTGCGGTTTTTTATTGTTTGAAATCTAAAGAGTTT
GAACTAGATCACAAATTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNIEIIPVTAFQQNCSLIWDDEKNAAIIDPGGEAERLIQRIEELDLNLKVLLLTHGHLDHVGAAMQLKQHFGVEIWGSNE
KDKFLFESLPEQAQRFGLPNIDAFLPDRWFNQEGEILKLDGFNFEILHLPGHTPGHIGFIEHEKKVAFTGDVLFQGGIGR
TDFPRGDYETLISSIRTKLLPLNDDIIIIAGHGSYTTIGQEKRSNPFLNSKS

Sequences:

>Translated_212_residues
MNIEIIPVTAFQQNCSLIWDDEKNAAIIDPGGEAERLIQRIEELDLNLKVLLLTHGHLDHVGAAMQLKQHFGVEIWGSNE
KDKFLFESLPEQAQRFGLPNIDAFLPDRWFNQEGEILKLDGFNFEILHLPGHTPGHIGFIEHEKKVAFTGDVLFQGGIGR
TDFPRGDYETLISSIRTKLLPLNDDIIIIAGHGSYTTIGQEKRSNPFLNSKS
>Mature_212_residues
MNIEIIPVTAFQQNCSLIWDDEKNAAIIDPGGEAERLIQRIEELDLNLKVLLLTHGHLDHVGAAMQLKQHFGVEIWGSNE
KDKFLFESLPEQAQRFGLPNIDAFLPDRWFNQEGEILKLDGFNFEILHLPGHTPGHIGFIEHEKKVAFTGDVLFQGGIGR
TDFPRGDYETLISSIRTKLLPLNDDIIIIAGHGSYTTIGQEKRSNPFLNSKS

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family

Homologues:

Organism=Homo sapiens, GI41327741, Length=199, Percent_Identity=31.1557788944724, Blast_Score=81, Evalue=6e-16,
Organism=Escherichia coli, GI1787158, Length=212, Percent_Identity=51.8867924528302, Blast_Score=239, Evalue=8e-65,
Organism=Caenorhabditis elegans, GI17538952, Length=190, Percent_Identity=32.1052631578947, Blast_Score=90, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1663_HAEIN (Q57544)

Other databases:

- EMBL:   L42023
- PIR:   D64174
- RefSeq:   NP_439805.1
- ProteinModelPortal:   Q57544
- GeneID:   950497
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1663
- NMPDR:   fig|71421.1.peg.1577
- TIGR:   HI_1663
- HOGENOM:   HBG753931
- OMA:   QQNCTLL
- ProtClustDB:   CLSK870033
- BioCyc:   HINF71421:HI_1663-MONOMER
- InterPro:   IPR001279
- SMART:   SM00849

Pfam domain/function: PF00753 Lactamase_B

EC number: NA

Molecular weight: Translated: 23882; Mature: 23882

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIEIIPVTAFQQNCSLIWDDEKNAAIIDPGGEAERLIQRIEELDLNLKVLLLTHGHLDH
CCEEEEEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHH
VGAAMQLKQHFGVEIWGSNEKDKFLFESLPEQAQRFGLPNIDAFLPDRWFNQEGEILKLD
HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEC
GFNFEILHLPGHTPGHIGFIEHEKKVAFTGDVLFQGGIGRTDFPRGDYETLISSIRTKLL
CCCEEEEECCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHEE
PLNDDIIIIAGHGSYTTIGQEKRSNPFLNSKS
CCCCCEEEEECCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIEIIPVTAFQQNCSLIWDDEKNAAIIDPGGEAERLIQRIEELDLNLKVLLLTHGHLDH
CCEEEEEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCHHH
VGAAMQLKQHFGVEIWGSNEKDKFLFESLPEQAQRFGLPNIDAFLPDRWFNQEGEILKLD
HHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEC
GFNFEILHLPGHTPGHIGFIEHEKKVAFTGDVLFQGGIGRTDFPRGDYETLISSIRTKLL
CCCEEEEECCCCCCCCEEEEECCCEEEEECCEEEECCCCCCCCCCCHHHHHHHHHHHHEE
PLNDDIIIIAGHGSYTTIGQEKRSNPFLNSKS
CCCCCEEEEECCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800