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The map label for this gene is ycaK [C]

Identifier: 16273444

GI number: 16273444

Start: 1615095

End: 1615703

Strand: Reverse

Name: ycaK [C]

Synonym: HI1544

Alternate gene names: 16273444

Gene position: 1615703-1615095 (Counterclockwise)

Preceding gene: 16273445

Following gene: 16273443

Centisome position: 88.28

GC content: 33.17

Gene sequence:

>609_bases
ATGAATCACTTAATTATTTTTGCTCATCCTAATTCAGTGCGTAGTTTTGGGCGAGCGATTGCCAATCGTATTGAGCAAAT
TAGTCAAGAAAATGGTGTAAATGTATTTTTTCGAGATCTTTATGAAATGAATTTTAATCCAATTTTATCTCATGAAGAAT
TGCAGAATGCTAACAATGGTATTATTCCAGAAGATATTCAGCAAGAGCATGATTTTATTCTTCAAGCAGATTTAATTACG
TTGGTTTATCCCCTTTGGTGGATGGGGTTCCCAGCAATTTTGAAAGGCTATTTAGATCGCGTATTAAGCCATGGCTTTGC
TTATAAAACGGAAAACGGCGAATCAGTGGGGTTGCTCAAAAATAAGCAAATGCAGCAATTTATTACGATTGGCAGTAATG
TTGATAAATATAAAGAATTTGGTGTAGATAAATCGCTTAATCATTGTTTGATTAATGGATTATTCAATTATTGTGGAATT
GAAAATGTCGAGTTTGAATTATTTGGAGATATTCATTTAATTGATGATAAGGCGCGTAAAGCGATGATTGAACTTGCTGC
TCAAAAAACTCAAGCAAAATTGACCGCACTTTTAAAGGAAAAAGAGTAA

Upstream 100 bases:

>100_bases
CGGGATATGCCCGCTTTTTTTATGTGATTTTATATGCAAAGTGCGCTCTATTTTGATAGACTTCTGTCACGTTTTATTTC
CCTACAAATAGGTAAGAAAA

Downstream 100 bases:

>100_bases
TGTCTGAAAAACAAATTAATAATTTTTCATTAATTAGTCGATTATTCGGTAATCTTTTTTATCGTTTTCCAACAGATAAA
GTACTCGCTGACGCATTTGT

Product: putative NAD(P)H oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANNGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDKYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKE

Sequences:

>Translated_202_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANNGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDKYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKE
>Mature_202_residues
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANNGIIPEDIQQEHDFILQADLIT
LVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLKNKQMQQFITIGSNVDKYKEFGVDKSLNHCLINGLFNYCGI
ENVEFELFGDIHLIDDKARKAMIELAAQKTQAKLTALLKEKE

Specific function: Unknown

COG id: COG2249

COG function: function code R; Putative NADPH-quinone reductase (modulator of drug activity B)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD(P)H dehydrogenase (quinone) family

Homologues:

Organism=Homo sapiens, GI156564357, Length=210, Percent_Identity=27.6190476190476, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4505415, Length=201, Percent_Identity=30.3482587064677, Blast_Score=78, Evalue=6e-15,
Organism=Escherichia coli, GI1787129, Length=196, Percent_Identity=31.1224489795918, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1544_HAEIN (P45245)

Other databases:

- EMBL:   L42023
- PIR:   G64128
- RefSeq:   NP_439693.1
- ProteinModelPortal:   P45245
- SMR:   P45245
- GeneID:   950407
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1544
- NMPDR:   fig|71421.1.peg.1471
- TIGR:   HI_1544
- HOGENOM:   HBG532247
- OMA:   LSHGFAY
- ProtClustDB:   CLSK870287
- BioCyc:   HINF71421:HI_1544-MONOMER
- InterPro:   IPR003680

Pfam domain/function: PF02525 Flavodoxin_2

EC number: 1.6.99.- [C]

Molecular weight: Translated: 23160; Mature: 23160

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANNG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCC
IIPEDIQQEHDFILQADLITLVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCEECHHH
NKQMQQFITIGSNVDKYKEFGVDKSLNHCLINGLFNYCGIENVEFELFGDIHLIDDKARK
HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHH
AMIELAAQKTQAKLTALLKEKE
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHLIIFAHPNSVRSFGRAIANRIEQISQENGVNVFFRDLYEMNFNPILSHEELQNANNG
CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCC
IIPEDIQQEHDFILQADLITLVYPLWWMGFPAILKGYLDRVLSHGFAYKTENGESVGLLK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCEECHHH
NKQMQQFITIGSNVDKYKEFGVDKSLNHCLINGLFNYCGIENVEFELFGDIHLIDDKARK
HHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECHHHHH
AMIELAAQKTQAKLTALLKEKE
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800