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The map label for this gene is xseB [H]

Identifier: 16273344

GI number: 16273344

Start: 1526179

End: 1526433

Strand: Direct

Name: xseB [H]

Synonym: HI1437

Alternate gene names: 16273344

Gene position: 1526179-1526433 (Clockwise)

Preceding gene: 16273339

Following gene: 16273345

Centisome position: 83.39

GC content: 36.86

Gene sequence:

>255_bases
ATGGCGCGTAAACCCGCATCTTCACAAGATTTTGAAACAACGTTAGTGCAGTTAGAAAATATTGTTACACATTTAGAAAA
TGGCGATCTACCGTTAGAAGAAGCGTTAAAAGAATTTGAACAAGGTGTGCAATTAGCTAAGTTAGGGCAAGAACGTTTAC
AACAAGCAGAACAACGTATTCAGATCTTATTGCAAAAAACAGAAGACGCGCCACTGAATGATTATAAAGGGAATGATTAT
GAAGGGAATGCTTAA

Upstream 100 bases:

>100_bases
TGAAAAGTCCACTGGTCCTAGCTTGAAATAATTTTTTAACAACTCAAGTAAAATACAGTACAATGGCAAACAATTTTTAC
CGTGAATAAAGGATAATTCC

Downstream 100 bases:

>100_bases
TGGGTCACTTTTCTGAAGAATTACAACAGGTTCAAACTCGTATCAATCGCTTTTTAGAAGCTCAATTTGAAGGCATTGAA
AGTCATAATGCGCCTTTGCT

Product: exodeoxyribonuclease VII small subunit

Products: NA

Alternate protein names: Exodeoxyribonuclease VII small subunit; Exonuclease VII small subunit [H]

Number of amino acids: Translated: 84; Mature: 83

Protein sequence:

>84_residues
MARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRIQILLQKTEDAPLNDYKGNDY
EGNA

Sequences:

>Translated_84_residues
MARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRIQILLQKTEDAPLNDYKGNDY
EGNA
>Mature_83_residues
ARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRIQILLQKTEDAPLNDYKGNDYE
GNA

Specific function: Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides [H]

COG id: COG1722

COG function: function code L; Exonuclease VII small subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xseB family [H]

Homologues:

Organism=Escherichia coli, GI1786624, Length=79, Percent_Identity=58.2278481012658, Blast_Score=89, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003761
- ProDom:   PD028235 [H]

Pfam domain/function: PF02609 Exonuc_VII_S [H]

EC number: =3.1.11.6 [H]

Molecular weight: Translated: 9512; Mature: 9380

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRI
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QILLQKTEDAPLNDYKGNDYEGNA
HHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQERLQQAEQRI
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QILLQKTEDAPLNDYKGNDYEGNA
HHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA