Click here to switch to the map view.

The map label for this gene is yqcC [C]

Identifier: 16273343

GI number: 16273343

Start: 1524226

End: 1524546

Strand: Reverse

Name: yqcC [C]

Synonym: HI1436

Alternate gene names: 16273343

Gene position: 1524546-1524226 (Counterclockwise)

Preceding gene: 16273347

Following gene: 149212744

Centisome position: 83.3

GC content: 38.24

Gene sequence:

>321_bases
ATGCGTAATCAAACTAAACAGCATCTTGAACAGCTTCAAATTACCATGCAGCAGCTTAATTTATGGCAAACGATGCCCCC
TGCTGCAGAGGCGTTTTTAAGTGAAGAACCTTTTTCAATTGATACGATGTCTGCCGAAGAGTGGCTACAGTGGGTATTTA
TTCCACGCATGCAGGCATTGTTAGAAAGTGGNTCAGCCTTGCCAAATAAAATTGCTATTTCTCCTTATATTGAAGAAGCA
ATGAAGGAATTTAATGAGTTACAACAACTATTAACTCCTTTAGTTGCTTTAGAAGAACTTKTGAACAATAACGAATGCTA
G

Upstream 100 bases:

>100_bases
GTGGTGTGATGAGTAAATTACAAGCCTTATATTTGAAAGAAAATGGTTTTTCAAATGTGCGTGTATTTGCAAAAAACATT
CATTAATTAGGATATAAAAT

Downstream 100 bases:

>100_bases
AAATTTTATATCAAGATGGGTTTCTCGTTGCGGTGAATAAGCCTGCAGGTATGCTGGTTCATCGCAGTTGGTTAGATCCT
CACGAAACTCAATTTGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPNKIAISPYIEEA
MKEFNELQQLLTPLVALEELXNNNEC

Sequences:

>Translated_106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPNKIAISPYIEEA
MKEFNELQQLLTPLVALEELXNNNEC
>Mature_106_residues
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQALLESGSALPNKIAISPYIEEA
MKEFNELQQLLTPLVALEELXNNNEC

Specific function: Unknown

COG id: COG3098

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqcC

Homologues:

Organism=Escherichia coli, GI1789156, Length=60, Percent_Identity=46.6666666666667, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1436_HAEIN (Q57152)

Other databases:

- EMBL:   L42023
- PIR:   I64171
- RefSeq:   NP_439587.1
- ProteinModelPortal:   Q57152
- GeneID:   950784
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1436
- NMPDR:   fig|71421.1.peg.1370
- TIGR:   HI_1436
- HOGENOM:   HBG742121
- OMA:   STQPFCM
- ProtClustDB:   CLSK870126
- BioCyc:   HINF71421:HI_1436-MONOMER
- InterPro:   IPR007384
- PIRSF:   PIRSF006257

Pfam domain/function: PF04287 DUF446

EC number: NA

Molecular weight: Translated: 12220; Mature: 12220

Theoretical pI: Translated: 3.95; Mature: 3.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LESGSALPNKIAISPYIEEAMKEFNELQQLLTPLVALEELXNNNEC
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRNQTKQHLEQLQITMQQLNLWQTMPPAAEAFLSEEPFSIDTMSAEEWLQWVFIPRMQAL
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
LESGSALPNKIAISPYIEEAMKEFNELQQLLTPLVALEELXNNNEC
HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800