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The map label for this gene is 16273329

Identifier: 16273329

GI number: 16273329

Start: 1512159

End: 1513073

Strand: Reverse

Name: 16273329

Synonym: HI1424

Alternate gene names: NA

Gene position: 1513073-1512159 (Counterclockwise)

Preceding gene: 16273333

Following gene: 30995448

Centisome position: 82.68

GC content: 39.78

Gene sequence:

>915_bases
ATGCATCGATTACGCCAATGCAACATGAAATGGGGTGCGGAAGAGGAAAAGAAAATAGAATTGCAAGCACAAGGATTGCA
ACCTGATACATTATTTTCTGATGTTATTAAGCGGTATTTGAACAAAATTACGCCAACAAAGCGTGGAGAAAAGCACGAAT
TTAATCGGCTGAATCGCTTTTTGCGCCATCCAGTTACGGATAAATATATATCTGATGTTAGTCGGAGAGATATTGAGGAT
TGGATTGCGGAGCGATTGGAATCAGTAAAAAGTGAAAGTGTGCGCCGTGAATTATCTACGATAGGTCATATATTCAAAAT
TGCCCTTGAGCGATGGGGGTATATACAAAAAAGCCCTATGGTCGGCATACAATTACCCGAAAAAGGGAAACCTCGAACTC
AGCGAGTAACGGAAGAAAATATTAATGCTATTGTGGCTATCAGTGAATATGTTGATACGCTCAAAACTGCAAAAGCGAGA
ACGGCTGCGGCAATATTGTTTGCTGTTGAAACCGCAATGAGAGCAGGGAAGATTTGTAGTCTTAGTTGGGGTAATGTAAA
TTTTGAGAAACGTACTGCATTTTTGCCTATGACAAAAAACGGTACATCAAGAACCGTGCCATTGACTAAAAATGCAATCG
CTATTTTAGAACGGTTAAAAGTCGAGATAGGGGATGCTGGATTGTGTTTTGATATTAAGTCTAGTGTGCTTGATGCAACA
TTCCGAAAACTCAAAAAACTTGCCGAGCGAGAATATTTGCATTTCCACGATACGCGGCGTGAGGCATTAACTAGGCTATC
TAAAAAAGTAGATGTGATGACATTAGCCAAAATATCTGGGCATAAAGATATTTCGATTTTACAAAATGTCTATTATGCCC
CTGATATGGCGGAGGTGGCGGAATTACTTGATTAG

Upstream 100 bases:

>100_bases
TTATGCATTTCAACCAGTAAAATCAATACGTTACGTTCACATCAGCCATAAACCCCTCATTAATTCCAACCTCAAATATT
GCCATTTTTTAAGTATTTTT

Downstream 100 bases:

>100_bases
CTAATACGGTTTAGCATTGATCCGCCCCCAACGAACAACTTCGCCTGCGATATAGCGTGGGCGAGAATTTTGTTGATCGA
CTGTAACGGGTGTAACGGGT

Product: integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDIED
WIAERLESVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEENINAIVAISEYVDTLKTAKAR
TAAAILFAVETAMRAGKICSLSWGNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDAT
FRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD

Sequences:

>Translated_304_residues
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDIED
WIAERLESVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEENINAIVAISEYVDTLKTAKAR
TAAAILFAVETAMRAGKICSLSWGNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDAT
FRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD
>Mature_304_residues
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGEKHEFNRLNRFLRHPVTDKYISDVSRRDIED
WIAERLESVKSESVRRELSTIGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEENINAIVAISEYVDTLKTAKAR
TAAAILFAVETAMRAGKICSLSWGNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDAT
FRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVAELLD

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1424_HAEIN (P45198)

Other databases:

- EMBL:   L42023
- PIR:   D64122
- RefSeq:   NP_439573.1
- ProteinModelPortal:   P45198
- GeneID:   950326
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1424
- NMPDR:   fig|71421.1.peg.1356
- TIGR:   HI_1424
- HOGENOM:   HBG636654
- OMA:   FAVETAM
- ProtClustDB:   CLSK808524
- BioCyc:   HINF71421:HI_1424-MONOMER
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109
- Gene3D:   G3DSA:1.10.150.130
- Gene3D:   G3DSA:1.10.443.10

Pfam domain/function: PF00589 Phage_integrase; SSF56349 DNA_brk_join_enz

EC number: NA

Molecular weight: Translated: 34857; Mature: 34857

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGEKHEFNRLNRF
CCCCHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LRHPVTDKYISDVSRRDIEDWIAERLESVKSESVRRELSTIGHIFKIALERWGYIQKSPM
HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VGIQLPEKGKPRTQRVTEENINAIVAISEYVDTLKTAKARTAAAILFAVETAMRAGKICS
EEEECCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LSWGNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDAT
EECCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
FRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ELLD
HHHC
>Mature Secondary Structure
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGEKHEFNRLNRF
CCCCHHCCCCCCCCHHHEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
LRHPVTDKYISDVSRRDIEDWIAERLESVKSESVRRELSTIGHIFKIALERWGYIQKSPM
HHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
VGIQLPEKGKPRTQRVTEENINAIVAISEYVDTLKTAKARTAAAILFAVETAMRAGKICS
EEEECCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
LSWGNVNFEKRTAFLPMTKNGTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDAT
EECCCCCHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHH
FRKLKKLAEREYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHH
ELLD
HHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800