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The map label for this gene is trpH

Identifier: 16273309

GI number: 16273309

Start: 1496764

End: 1497588

Strand: Reverse

Name: trpH

Synonym: HI1400

Alternate gene names: 16273309

Gene position: 1497588-1496764 (Counterclockwise)

Preceding gene: 16273310

Following gene: 16273306

Centisome position: 81.83

GC content: 43.03

Gene sequence:

>825_bases
ATGACAAAAAAATACGACTTACATTGTCATAGTACCGCATCAGATGGAGTGTTGAGTCCAACCGAATTAGTGCATCGTGC
TTATGCGCAAGGCGTGAACGTGCTGGCATTATGCGATCACGATACGATTGCGGGCATTGATGAAGCTGAGATTGCAGCGA
AAGAAGTAGGCATTGAATTGATTACTGGAGTAGAAATTTCGACAAATTGGGAAGGGCGAGGGATCCATATTGTAGGATTA
AACTTCGATAAAACTCATCCAAAAATGACCGCACTTTTGCAAAGTCAAAAAGCATTACGGGAAAAAAGAGCGGTGGAAAT
TGGCGATAAATTAGAAAAAGCAGGGATTCCTAATGCTTATGACGGAGCAAAAGCCTTAGCCGATGGCGAAGTGACGCGTG
CTCATTATGCACGTTATTTGGTGCAGATTGGTAAGGTATCTAATGATGGTCAGGCCTTTAAACGCTATTTAGGGCAAGGA
AAATCGGCATTTGTTAAAGCTGAATGGGCTGATATTCCCACAGCGATTGAGACAATCCATGCCGCAGGTGGTATAGCTAT
TATTGCGCATCCATTACGTTATAACATGACGGGGAAATGGGTGCGTAAGCTGATAGTCGATTTTAAGGCTTGGGGCGGTG
ATGGAATGGAAATGGCGGATTGTGGTCAAACAAAAGATCAGCGTCAAATGCTTGCTCGTTGGGCAAAAGAATTTGATCTG
CAGGGATCCGTTGGCTCCGATTTTCATTTCCCTTGTGGCTGGATTGAGTTAGGAAAAAATTTAGATTTAGTTGATAGCGT
TATCCCAGTTTGGGAAAAATTTTAG

Upstream 100 bases:

>100_bases
AAGAGAAAATTGAGGCTGGTGCAGAGTTGTTGCAAGTTTATTCAGGATTGATTTATCACGGTCCAAAATTAGTAAAAGAA
TTAGTAAAAAATATTAAATA

Downstream 100 bases:

>100_bases
TCAGATAGAGAATGTTCAAATAATAAATACCTGTTTCCTTGATAATAATTTATTCGGAAACAGGTATTTTTTATGGTGCA
AAATATAAAAAACTGAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MTKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGL
NFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAYDGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQG
KSAFVKAEWADIPTAIETIHAAGGIAIIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFDL
QGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF

Sequences:

>Translated_274_residues
MTKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGL
NFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAYDGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQG
KSAFVKAEWADIPTAIETIHAAGGIAIIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFDL
QGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF
>Mature_273_residues
TKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIELITGVEISTNWEGRGIHIVGLN
FDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAYDGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQGK
SAFVKAEWADIPTAIETIHAAGGIAIIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFDLQ
GSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family

Homologues:

Organism=Escherichia coli, GI1787520, Length=271, Percent_Identity=50.1845018450184, Blast_Score=267, Evalue=5e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): TRPH_HAEIN (P44176)

Other databases:

- EMBL:   L42023
- PIR:   F64027
- RefSeq:   NP_439553.1
- ProteinModelPortal:   P44176
- GeneID:   950717
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1400
- NMPDR:   fig|71421.1.peg.1336
- TIGR:   HI_1400
- HOGENOM:   HBG403721
- OMA:   ITDHDSV
- ProtClustDB:   CLSK870171
- BioCyc:   HINF71421:HI_1400-MONOMER
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- SMART:   SM00481

Pfam domain/function: PF02811 PHP; SSF89550 PHP-like

EC number: NA

Molecular weight: Translated: 30117; Mature: 29985

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIEL
CCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCEEE
ITGVEISTNWEGRGIHIVGLNFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAY
EECEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQGKSAFVKAEWADIPTAIETIH
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
AAGGIAIIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFDL
HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
QGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKYDLHCHSTASDGVLSPTELVHRAYAQGVNVLALCDHDTIAGIDEAEIAAKEVGIEL
CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCEEE
ITGVEISTNWEGRGIHIVGLNFDKTHPKMTALLQSQKALREKRAVEIGDKLEKAGIPNAY
EECEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DGAKALADGEVTRAHYARYLVQIGKVSNDGQAFKRYLGQGKSAFVKAEWADIPTAIETIH
CCHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHHHHHHH
AAGGIAIIAHPLRYNMTGKWVRKLIVDFKAWGGDGMEMADCGQTKDQRQMLARWAKEFDL
HCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHCCC
QGSVGSDFHFPCGWIELGKNLDLVDSVIPVWEKF
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800