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The map label for this gene is ycbZ [C]

Identifier: 16273234

GI number: 16273234

Start: 1402678

End: 1404483

Strand: Direct

Name: ycbZ [C]

Synonym: HI1324

Alternate gene names: 16273234

Gene position: 1402678-1404483 (Clockwise)

Preceding gene: 16273232

Following gene: 16273235

Centisome position: 76.64

GC content: 36.99

Gene sequence:

>1806_bases
GTGGTCAATTTTTCTAGAAAGAGACCAGCCGTGAGTTCATTATTTTCTCAACAACAAGCTATTGAGCAATCTTTAAATTG
GCAGGCATTACAACCTGATTTGGTAATTCAAGATTTTCCTTTAGAACCAGTGAATTTCTGGGCGTTACAACCGAATGCTA
CACAGGGTATCGATTTATTTTTACGTCATCCGACACGTTCCTTGCTAATGATGAAAGTGGGCGAACCTGTTGAATATGCG
GAGTTATTACAAAATTTTATATCGCAAAATCATCATAAAGTGCGGTCAATTTTTGGTGTAAATTATGTGATAGAGCAGGG
CGACTCTTTTTCTTTTCCTCATGTTTATACTGAGCCAGCAAAATCTTTAGATGATAATTTTGCTAGTCAAGGGGAGGCGT
TAAGCGCATTGTATTGCGATCAATTCCAGCTTTTCGGTAGTTTTCGGATTCATCCACGTTCACAAGATATTCAATTAGTG
CCGGGATTGGTGCATAAGGCTAATGGTGGCGTTTTGATTTTAAGTGCGGCAACATTGTTATCTCAATTTGATTTATGGGG
GCGATTAAAACAAATTCTGCAAACCCAGACTTTTGACTGGTATTCAGCCCATCCATTTAAAAATTTACCTTGTGATATAC
CAAGCTATGCGCTGAACTTAAAAGTGATTGTACTTGGTAATCGTACTGAATTAGCCACTTTGGCTGAGTTAGAAGAAAAT
CTTTATTCTTTCGCCGATTATGCTGAAATTGAAAGTTATATTTCTGTAGCTGAAGTGGAGGAACAAAAAACTTGGGCGGG
TTATGTACAACAAATGGCTCAAGAGCAAAATATTGAGCTAGATTTTCTTGCTTTAAATAAACTCTATCAATTATTAGTTC
GTGAAAGTGAAAATCGCTTTTTAATTAATGCATCTCCTCTCAAATTAAAAGAAATATTACAGGATGCCTCAACTTTTACT
GAAAAAACAGCATTAAGTGCGGTGGATTTTGAGGGTATTTTTCAACAAAAATTAGCGCAATATGGTTTCTTAAAAGAACA
AACTTATGCCGATATTTTAAACGAGCAAGTTTATGTCGAAACGCAAGGCGAAATTGTTGGACAAATTAATGGGCTTTCGG
TAATTGAATATCCTGGTACGCCAGTATGTTTCGGCGAACCTTCGCGTATTAGTTGTATTGTGCAATTTGGCGATGGGGAA
GTGATTGATGTTGAAAGAAAAAATGAACTAGCGGGAAATATTCACGGTAAAGGAATGATGATTGCTCAGGCTTGTCTTTC
CAATATCTTAGATTTGCCCTCGCAATTGCCATTTTCTGCATCATTGGTGTTTGAACAGTCTTATGGAGAAATTGATGGCG
ATAGTGCATCTTTGGCGATTTTTTGTGTGTTAGTAAGTGCTTTAGCCGATTTGCCTTTGCCTCAACATATCGCAATTACA
GGATCAATTGATCAATTTGGACTTGTTCATTCTGTTGGTGGTGTAAATGATAAAATTGAAGGCTTTTTTACTATTTGCCA
ACGTCGTGGTTTGACTGGAAAACAAGGTGTAATCATTCCAATGACAACAATCCAGCAACTGAGTTTATCTGATGACGTGA
AAAGTGCGGTAAAAAATGGCGAGTTTTTTATTTATCCTGTGGAAGATATTTATCAGGCTTGTGAATTGTTATTTGGGCGT
GATTTGTTAGATGAAAACAAAGATTATACAGAAAAAACTGAGTCTTTATCTCGTCTTATTCAACGTCGTATTGAGGGACG
TGCCGATTCTGAACGAAAAAGTTTTTGGCATTTTTTCCGCTCCTAA

Upstream 100 bases:

>100_bases
TCATTTTTTATCATTGAGTGACGTGGTAACTGCATTAATATACGTGTTTTTATGCCGATTTTCTAGTGGATTTTCACAAG
GCTATTAAATATGCGATAAT

Downstream 100 bases:

>100_bases
TAGAGAAAAGCGAGCATTTTTTCGCTTTTCTTTTTTTCTATAATTTCTAAGAGTGACTGCTCCGACAAGTTTTGCGAACA
AGTGTTAGCTATTTACAGTT

Product: lon protease

Products: NA

Alternate protein names: ATP-dependent protease La homolog

Number of amino acids: Translated: 601; Mature: 601

Protein sequence:

>601_residues
MVNFSRKRPAVSSLFSQQQAIEQSLNWQALQPDLVIQDFPLEPVNFWALQPNATQGIDLFLRHPTRSLLMMKVGEPVEYA
ELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPHVYTEPAKSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLV
PGLVHKANGGVLILSAATLLSQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIPSYALNLKVIVLGNRTELATLAELEEN
LYSFADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKLYQLLVRESENRFLINASPLKLKEILQDASTFT
EKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVETQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGE
VIDVERKNELAGNIHGKGMMIAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAIT
GSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNGEFFIYPVEDIYQACELLFGR
DLLDENKDYTEKTESLSRLIQRRIEGRADSERKSFWHFFRS

Sequences:

>Translated_601_residues
MVNFSRKRPAVSSLFSQQQAIEQSLNWQALQPDLVIQDFPLEPVNFWALQPNATQGIDLFLRHPTRSLLMMKVGEPVEYA
ELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPHVYTEPAKSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLV
PGLVHKANGGVLILSAATLLSQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIPSYALNLKVIVLGNRTELATLAELEEN
LYSFADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKLYQLLVRESENRFLINASPLKLKEILQDASTFT
EKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVETQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGE
VIDVERKNELAGNIHGKGMMIAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAIT
GSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNGEFFIYPVEDIYQACELLFGR
DLLDENKDYTEKTESLSRLIQRRIEGRADSERKSFWHFFRS
>Mature_601_residues
MVNFSRKRPAVSSLFSQQQAIEQSLNWQALQPDLVIQDFPLEPVNFWALQPNATQGIDLFLRHPTRSLLMMKVGEPVEYA
ELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPHVYTEPAKSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLV
PGLVHKANGGVLILSAATLLSQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIPSYALNLKVIVLGNRTELATLAELEEN
LYSFADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKLYQLLVRESENRFLINASPLKLKEILQDASTFT
EKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVETQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGE
VIDVERKNELAGNIHGKGMMIAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAIT
GSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNGEFFIYPVEDIYQACELLFGR
DLLDENKDYTEKTESLSRLIQRRIEGRADSERKSFWHFFRS

Specific function: Unknown

COG id: COG1067

COG function: function code O; Predicted ATP-dependent protease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S16 family

Homologues:

Organism=Escherichia coli, GI1787188, Length=568, Percent_Identity=41.9014084507042, Blast_Score=402, Evalue=1e-113,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): LONH_HAEIN (P43865)

Other databases:

- EMBL:   L42023
- PIR:   F64116
- RefSeq:   NP_439475.1
- ProteinModelPortal:   P43865
- SMR:   P43865
- MEROPS:   S16.007
- GeneID:   950250
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1324
- NMPDR:   fig|71421.1.peg.1262
- TIGR:   HI_1324
- HOGENOM:   HBG678164
- OMA:   IMQAFLI
- ProtClustDB:   CLSK870128
- BioCyc:   HINF71421:HI_1324-MONOMER
- GO:   GO:0006508
- InterPro:   IPR008269
- InterPro:   IPR008268
- InterPro:   IPR001984
- InterPro:   IPR020568
- PRINTS:   PR00830

Pfam domain/function: PF05362 Lon_C; SSF54211 Ribosomal_S5_D2-typ_fold

EC number: 3.4.21.-

Molecular weight: Translated: 67570; Mature: 67570

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01046 LON_SER

Important sites: ACT_SITE 455-455 ACT_SITE 498-498

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNFSRKRPAVSSLFSQQQAIEQSLNWQALQPDLVIQDFPLEPVNFWALQPNATQGIDLF
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCCEEE
LRHPTRSLLMMKVGEPVEYAELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPHVYTEPA
EECCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCHH
KSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLVPGLVHKANGGVLILSAATLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCHHHEECCCCEEEEEHHHHH
SQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIPSYALNLKVIVLGNRTELATLAELEEN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHH
LYSFADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKLYQLLVRESENRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCE
LINASPLKLKEILQDASTFTEKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEE
TQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGEVIDVERKNELAGNIHGKGMM
ECCCEEEEECCEEEEECCCCCEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHH
IAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAIT
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
GSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNG
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCHHHHHHHCCC
EFFIYPVEDIYQACELLFGRDLLDENKDYTEKTESLSRLIQRRIEGRADSERKSFWHFFR
CEEEEEHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
S
C
>Mature Secondary Structure
MVNFSRKRPAVSSLFSQQQAIEQSLNWQALQPDLVIQDFPLEPVNFWALQPNATQGIDLF
CCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCEEEECCCCCCCEEEEECCCCCCCCEEE
LRHPTRSLLMMKVGEPVEYAELLQNFISQNHHKVRSIFGVNYVIEQGDSFSFPHVYTEPA
EECCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCEEEEECCCCCCCCCCCCCHH
KSLDDNFASQGEALSALYCDQFQLFGSFRIHPRSQDIQLVPGLVHKANGGVLILSAATLL
HHHHHHHHCCCCHHHHHHHHHHHHCCCEEECCCCCCCEECCHHHEECCCCEEEEEHHHHH
SQFDLWGRLKQILQTQTFDWYSAHPFKNLPCDIPSYALNLKVIVLGNRTELATLAELEEN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHH
LYSFADYAEIESYISVAEVEEQKTWAGYVQQMAQEQNIELDFLALNKLYQLLVRESENRF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCE
LINASPLKLKEILQDASTFTEKTALSAVDFEGIFQQKLAQYGFLKEQTYADILNEQVYVE
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEE
TQGEIVGQINGLSVIEYPGTPVCFGEPSRISCIVQFGDGEVIDVERKNELAGNIHGKGMM
ECCCEEEEECCEEEEECCCCCEECCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCHHH
IAQACLSNILDLPSQLPFSASLVFEQSYGEIDGDSASLAIFCVLVSALADLPLPQHIAIT
HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEE
GSIDQFGLVHSVGGVNDKIEGFFTICQRRGLTGKQGVIIPMTTIQQLSLSDDVKSAVKNG
CCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHCCCHHHHHHHCCC
EFFIYPVEDIYQACELLFGRDLLDENKDYTEKTESLSRLIQRRIEGRADSERKSFWHFFR
CEEEEEHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800