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The map label for this gene is cvpA

Identifier: 16273126

GI number: 16273126

Start: 1272884

End: 1273375

Strand: Direct

Name: cvpA

Synonym: HI1206

Alternate gene names: 16273126

Gene position: 1272884-1273375 (Clockwise)

Preceding gene: 16273125

Following gene: 16273127

Centisome position: 69.55

GC content: 37.2

Gene sequence:

>492_bases
ATGATCGATTACATTATTATTGGCATTATCGCTTTTTCCATTCTTGTTAGTTTATTACGCGGTTTTGTTCGCGAAGTGCT
TTCACTCGGTAGCTGGATTGTGGCATTTATTGTAGCAAGTCAGTTCTATCCTTATCTTGCTGCTTATCTTACGCAAATTG
AATCAATGTATATTCGTAATGGAACTGCAATCGCCATTTTGTTTGTTCTGACTTTAATTGTGGGTGCCATAGTAAATTAT
GTGATTAGTCAATTAGTGGATAAGACGGGTTTAAGCGGCACTGATCGCGTATTAGGTGCAGCTTTCGGTTTAGTGCGCGG
TGCGCTGATTGTGGCTGCGTTGTTATTTTTTATGGATACTTTTACCAATTTTGAACAAACTGATTGGTGGAAAGAATCTC
AATTAATTCCGCACTTTGGTTTTATTATTGAATGGTTCTTTCAACAACTTCAGGCGAGTTCAAGTTTTTTAACTCCAACG
CTTAATCAATAA

Upstream 100 bases:

>100_bases
GGCAGGAAATTTAGTTTACGCAAACGTTTTCTTTTTGGCTTTATTTTTGTAGAATAGCTCGGTCGTTTTAAACGGCCGTT
TTTCATTGAGAGATTTTTTA

Downstream 100 bases:

>100_bases
GGAACACAAAATGTGTGGTATTGTCGGTATTGTTAGCCAAAGTCCGGTTAATGAATCTATTTATGCAGCATTAACCCTTT
TGCAACATCGTGGACAAGAT

Product: colicin V production protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIDYIIIGIIAFSILVSLLRGFVREVLSLGSWIVAFIVASQFYPYLAAYLTQIESMYIRNGTAIAILFVLTLIVGAIVNY
VISQLVDKTGLSGTDRVLGAAFGLVRGALIVAALLFFMDTFTNFEQTDWWKESQLIPHFGFIIEWFFQQLQASSSFLTPT
LNQ

Sequences:

>Translated_163_residues
MIDYIIIGIIAFSILVSLLRGFVREVLSLGSWIVAFIVASQFYPYLAAYLTQIESMYIRNGTAIAILFVLTLIVGAIVNY
VISQLVDKTGLSGTDRVLGAAFGLVRGALIVAALLFFMDTFTNFEQTDWWKESQLIPHFGFIIEWFFQQLQASSSFLTPT
LNQ
>Mature_163_residues
MIDYIIIGIIAFSILVSLLRGFVREVLSLGSWIVAFIVASQFYPYLAAYLTQIESMYIRNGTAIAILFVLTLIVGAIVNY
VISQLVDKTGLSGTDRVLGAAFGLVRGALIVAALLFFMDTFTNFEQTDWWKESQLIPHFGFIIEWFFQQLQASSSFLTPT
LNQ

Specific function: Required For Colicin V Production From Plasmid Incfi Colv3-K30. [C]

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli CvpA

Homologues:

Organism=Escherichia coli, GI1788652, Length=156, Percent_Identity=64.7435897435898, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CVPA_HAEIN (P45108)

Other databases:

- EMBL:   L42023
- PIR:   H64189
- RefSeq:   NP_439362.1
- GeneID:   950153
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1206
- NMPDR:   fig|71421.1.peg.1153
- TIGR:   HI_1206
- HOGENOM:   HBG730383
- OMA:   VALLYSH
- ProtClustDB:   CLSK870209
- BioCyc:   HINF71421:HI_1206-MONOMER
- InterPro:   IPR003825

Pfam domain/function: PF02674 Colicin_V

EC number: NA

Molecular weight: Translated: 18247; Mature: 18247

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc3ec0ac)-; HASH(0xceafd4c)-; HASH(0xd7085e4)-; HASH(0xe385d74)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDYIIIGIIAFSILVSLLRGFVREVLSLGSWIVAFIVASQFYPYLAAYLTQIESMYIRN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTAIAILFVLTLIVGAIVNYVISQLVDKTGLSGTDRVLGAAFGLVRGALIVAALLFFMDT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTNFEQTDWWKESQLIPHFGFIIEWFFQQLQASSSFLTPTLNQ
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH
>Mature Secondary Structure
MIDYIIIGIIAFSILVSLLRGFVREVLSLGSWIVAFIVASQFYPYLAAYLTQIESMYIRN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GTAIAILFVLTLIVGAIVNYVISQLVDKTGLSGTDRVLGAAFGLVRGALIVAALLFFMDT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTNFEQTDWWKESQLIPHFGFIIEWFFQQLQASSSFLTPTLNQ
HCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800