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The map label for this gene is dmsC

Identifier: 16272977

GI number: 16272977

Start: 1109654

End: 1110493

Strand: Reverse

Name: dmsC

Synonym: HI1045

Alternate gene names: 16272977

Gene position: 1110493-1109654 (Counterclockwise)

Preceding gene: 16272978

Following gene: 16272976

Centisome position: 60.68

GC content: 36.55

Gene sequence:

>840_bases
ATGAATACAGGATTATATGAACTGCCATTAGTATTTTTTACAGTTTTGGCACAAAGTGCGGTCGGTGCTTGGCTTGTTTT
CACATTTGTACTATTAAATGAGAAAAATACAAAAAGTCGCACTTATATTCATAAAGTAATGTTTGTGATTTTGGCTTTAC
TAGGTATTGGATTTATTGCTTCCATTATGCATCTTGGCTTACCTATACGTGCATTTAATTCACTTAATCGAGTCGGCTCA
TCAATGATGAGTAATGAAATTGCCGCTGGTGCAATATTTTTCACATTAGCAGGTTTCTACTGGCTGATTGCAATTTTAGG
TAAAATGCCAGTTTCACTTGGAAATGTATGGCGAATTGTGACCGCCCTTATCGGCATACTATTTATGTATGTAATGAATC
AGGTTTACCATATTACAAGCATACCAACTTGGAATAATGCATTAACCTCTTGGTCATTCTACCTTACCGTTGTATTAGGT
GGATTAACATTGAGCTATGCGTTATTAATCCCTAATAAACAACGTGAATATCAGCTTCAGCATCTGCCAAGTTTATTCGC
CATTGGGGTATCATTGGTCGCAATAGTAGCCATATATCAAGGCTTCAATTTACACAATATTCACAGTGCTATTCAAAATG
CCGCTGACCTCGTACCAAATTATGCCATAATGACCGTAACTCGCTTATGTTTACTTTCCATTGTAGCTTTCCTCTTATTC
CGAGTGAAAAACATAGGACTATTAGGTATTTCCGTTCTATTAACGTTAGTAGCTGAAGGCATCGGTCGCGTATTATTTTA
TGGATTACATATGACTTACGGTATGACGATTGGTGGTTAA

Upstream 100 bases:

>100_bases
ACTGATATCACTCAACCAAATTTAGTGGTAAAACCCAATAAATACGCTCGTTTAAGTGGCGATACAAGTGGGTTCTTAGG
AAACCCAAGAGAGGTGTAAG

Downstream 100 bases:

>100_bases
ATTATGTTGAGGCGTATAGCATACGCCTCAATTTTTAGAAACGTTAATTAGTAATATTTAACTACCCCTCATATCCCCAT
TCACTAATGACAAATTGTTT

Product: anaerobic dimethyl sulfoxide reductase chain C

Products: NA

Alternate protein names: DMSO reductase anchor subunit

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIAAGAIFFTLAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVSLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMTIGG

Sequences:

>Translated_279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIAAGAIFFTLAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVSLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMTIGG
>Mature_279_residues
MNTGLYELPLVFFTVLAQSAVGAWLVFTFVLLNEKNTKSRTYIHKVMFVILALLGIGFIASIMHLGLPIRAFNSLNRVGS
SMMSNEIAAGAIFFTLAGFYWLIAILGKMPVSLGNVWRIVTALIGILFMYVMNQVYHITSIPTWNNALTSWSFYLTVVLG
GLTLSYALLIPNKQREYQLQHLPSLFAIGVSLVAIVAIYQGFNLHNIHSAIQNAADLVPNYAIMTVTRLCLLSIVAFLLF
RVKNIGLLGISVLLTLVAEGIGRVLFYGLHMTYGMTIGG

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=290, Percent_Identity=43.448275862069, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI1787123, Length=285, Percent_Identity=40.7017543859649, Blast_Score=197, Evalue=8e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DMSC_HAEIN (P45002)

Other databases:

- EMBL:   L42023
- EMBL:   U26665
- PIR:   E64109
- RefSeq:   NP_439204.1
- GeneID:   950571
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1045
- NMPDR:   fig|71421.1.peg.1005
- TIGR:   HI_1045
- HOGENOM:   HBG625162
- OMA:   FIASIMH
- ProtClustDB:   CLSK870602
- BioCyc:   HINF71421:HI_1045-MONOMER
- InterPro:   IPR007059

Pfam domain/function: PF04976 DmsC

EC number: NA

Molecular weight: Translated: 30756; Mature: 30756

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd4eae18)-; HASH(0xd33189c)-; HASH(0xe146608)-; HASH(0xdacaad0)-; HASH(0xde527c0)-; HASH(0xdcddcd8)-; HASH(0x405b3124)-; HASH(0xde3c820)-;

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
>Mature Secondary Structure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HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8635740