Click here to switch to the map view.

The map label for this gene is 16272951

Identifier: 16272951

GI number: 16272951

Start: 1080488

End: 1080916

Strand: Direct

Name: 16272951

Synonym: HI1016

Alternate gene names: NA

Gene position: 1080488-1080916 (Clockwise)

Preceding gene: 16272950

Following gene: 16272953

Centisome position: 59.04

GC content: 37.76

Gene sequence:

>429_bases
GTGATACGTTGTACAGATATAAATGAGATAACACCATTTAGCAGTTTTATCTCTAAAATACCAAATCATTGCGGTACACA
TATGGATGCGTCACGCCACTTTGTAAAAGATGGTTTAAGTATCAATGAACTGCCAATTGGGTATTTTTGCCATAAGGATG
TTGTATTACTTGAAGTTCCAAAAGGAGAAGCGGAAGGGATTACGAAAGAAGATTTAGAGCCTTATGCGGCTATTTTAGCG
CAAGTATCGTTTGCTTTCTTGTGCACAGGGTTTGAGAAATACAGAACTGAGAATCCGTTAATTTATCAAAATGAAGGACC
ATATATTGCGACTAGTGCGGGAAAATATTTATCCGATAACTATCCTAATTTAAAAGGAGTAGGTATTTGGTTTCCTTGCA
CTTGGTTCGCCGTCTTCTCGTGTACCTGA

Upstream 100 bases:

>100_bases
TCTGTATTTGATCTGCTTTTCCCTGTTGTCGTGTTAGCCAGCATTTTATTCTATATCAAACTTCAGAATAAAAATCTTTA
ATTACGGTTAAAATTTAATA

Downstream 100 bases:

>100_bases
TACAGAAAATCCGAAAAATTGCCACCAAGCGATCTTAGGTTATCAATGCACCATTACGCATTGTCGGGCTAGATTCAAGC
CAACTTGTATTGCTGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIRCTDINEITPFSSFISKIPNHCGTHMDASRHFVKDGLSINELPIGYFCHKDVVLLEVPKGEAEGITKEDLEPYAAILA
QVSFAFLCTGFEKYRTENPLIYQNEGPYIATSAGKYLSDNYPNLKGVGIWFPCTWFAVFSCT

Sequences:

>Translated_142_residues
MIRCTDINEITPFSSFISKIPNHCGTHMDASRHFVKDGLSINELPIGYFCHKDVVLLEVPKGEAEGITKEDLEPYAAILA
QVSFAFLCTGFEKYRTENPLIYQNEGPYIATSAGKYLSDNYPNLKGVGIWFPCTWFAVFSCT
>Mature_142_residues
MIRCTDINEITPFSSFISKIPNHCGTHMDASRHFVKDGLSINELPIGYFCHKDVVLLEVPKGEAEGITKEDLEPYAAILA
QVSFAFLCTGFEKYRTENPLIYQNEGPYIATSAGKYLSDNYPNLKGVGIWFPCTWFAVFSCT

Specific function: Unknown

COG id: COG1878

COG function: function code R; Predicted metal-dependent hydrolase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1016_HAEIN (P44095)

Other databases:

- EMBL:   L42023
- PIR:   E64018
- RefSeq:   NP_439177.1
- ProteinModelPortal:   P44095
- GeneID:   949991
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI1016
- NMPDR:   fig|71421.1.peg.980
- TIGR:   HI_1016
- BioCyc:   HINF71421:HI_1016-MONOMER
- InterPro:   IPR007325

Pfam domain/function: PF04199 Cyclase

EC number: NA

Molecular weight: Translated: 15926; Mature: 15926

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xcfc5680)-;

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRCTDINEITPFSSFISKIPNHCGTHMDASRHFVKDGLSINELPIGYFCHKDVVLLEVP
CEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEECC
KGEAEGITKEDLEPYAAILAQVSFAFLCTGFEKYRTENPLIYQNEGPYIATSAGKYLSDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCEEEECCCCCCCCC
YPNLKGVGIWFPCTWFAVFSCT
CCCCCEEEEEECHHHEEEEECH
>Mature Secondary Structure
MIRCTDINEITPFSSFISKIPNHCGTHMDASRHFVKDGLSINELPIGYFCHKDVVLLEVP
CEEECCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEECCCEEEEECC
KGEAEGITKEDLEPYAAILAQVSFAFLCTGFEKYRTENPLIYQNEGPYIATSAGKYLSDN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCEEEECCCCCCCCC
YPNLKGVGIWFPCTWFAVFSCT
CCCCCEEEEEECHHHEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800