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The map label for this gene is 16272826

Identifier: 16272826

GI number: 16272826

Start: 939264

End: 939668

Strand: Direct

Name: 16272826

Synonym: HI0886

Alternate gene names: NA

Gene position: 939264-939668 (Clockwise)

Preceding gene: 16272825

Following gene: 16272827

Centisome position: 51.32

GC content: 37.28

Gene sequence:

>405_bases
ATGAACAATCTTGAAAAATATCGCCCGTATTTCTTGGCATTTTTACGTATCGTTGTCGCTTATATGTTTATTTTACACGG
CACGGCAAAATTTTTGGAATTTCCAATTTCTATGACTGGAGGAAATGGTGCAGTAGGCGATCCAATGCTACTAGTGGCAG
GCGTAATTGAAATTGTTGGTTCCATTTTATTAATCTTAGGTTTATTTACACGCCAAGCCGCGTTTATTTTGTCAGTGGAA
ATGGCATATGCCTATTTCTTTCTGCACGTAGCAGGAAAAGGAAACCTATTTTTCCCAATTGCAAATGGCGGCGAGCTTGC
ATTACTTTACTCACTTCTCTTTCTATATTTTGTATTTTCTGGCGCAGGTGCTTGTGCTTTAGATAATAAGTTTTTTAAAA
AGTAG

Upstream 100 bases:

>100_bases
TTTTGGTAAAAAGTATTTTTCAATTTTAATTATTGTTTAACTACCCGTTAAAGATTAATATGACGCCGTTTTAATTCATC
TTTAAACAAAAGGAAAGCAA

Downstream 100 bases:

>100_bases
TTTAGTTGTAGTTTCATAATTTTATCCTTATTTTTGCCCACATTTATGTGGGCTTTTTTATGCCTGAAATTTATCGTATT
TTTACCGCACTTTAAGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MNNLEKYRPYFLAFLRIVVAYMFILHGTAKFLEFPISMTGGNGAVGDPMLLVAGVIEIVGSILLILGLFTRQAAFILSVE
MAYAYFFLHVAGKGNLFFPIANGGELALLYSLLFLYFVFSGAGACALDNKFFKK

Sequences:

>Translated_134_residues
MNNLEKYRPYFLAFLRIVVAYMFILHGTAKFLEFPISMTGGNGAVGDPMLLVAGVIEIVGSILLILGLFTRQAAFILSVE
MAYAYFFLHVAGKGNLFFPIANGGELALLYSLLFLYFVFSGAGACALDNKFFKK
>Mature_134_residues
MNNLEKYRPYFLAFLRIVVAYMFILHGTAKFLEFPISMTGGNGAVGDPMLLVAGVIEIVGSILLILGLFTRQAAFILSVE
MAYAYFFLHVAGKGNLFFPIANGGELALLYSLLFLYFVFSGAGACALDNKFFKK

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y886_HAEIN (P44069)

Other databases:

- EMBL:   L42023
- PIR:   F64015
- RefSeq:   NP_439047.1
- GeneID:   949888
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0886
- NMPDR:   fig|71421.1.peg.853
- TIGR:   HI_0886
- HOGENOM:   HBG706937
- OMA:   GEMAYAY
- ProtClustDB:   CLSK892385
- BioCyc:   HINF71421:HI_0886-MONOMER
- InterPro:   IPR011637

Pfam domain/function: PF07681 DoxX

EC number: NA

Molecular weight: Translated: 14754; Mature: 14754

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS00578 RIBOSOMAL_S6E

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb70621c)-; HASH(0xafc7984)-; HASH(0xcf8d18c)-;

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLEKYRPYFLAFLRIVVAYMFILHGTAKFLEFPISMTGGNGAVGDPMLLVAGVIEIVG
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
SILLILGLFTRQAAFILSVEMAYAYFFLHVAGKGNLFFPIANGGELALLYSLLFLYFVFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
GAGACALDNKFFKK
CCCCCCCCHHHHCH
>Mature Secondary Structure
MNNLEKYRPYFLAFLRIVVAYMFILHGTAKFLEFPISMTGGNGAVGDPMLLVAGVIEIVG
CCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHHH
SILLILGLFTRQAAFILSVEMAYAYFFLHVAGKGNLFFPIANGGELALLYSLLFLYFVFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHC
GAGACALDNKFFKK
CCCCCCCCHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800