| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
Click here to switch to the map view.
The map label for this gene is 16272822
Identifier: 16272822
GI number: 16272822
Start: 933947
End: 934684
Strand: Direct
Name: 16272822
Synonym: HI0882
Alternate gene names: NA
Gene position: 933947-934684 (Clockwise)
Preceding gene: 16272821
Following gene: 16272825
Centisome position: 51.03
GC content: 37.4
Gene sequence:
>738_bases ATGAATACAGAACTTCAACCTAAACTAGAAAAAAGTGCGGTCAATTTTCAAGCTAAACCGCGAAAACAAAAAATCCGTAA GGATCCTAACGCACCTTTTATTCGTGAAAAACTTGAGTTGCCAGATGGACACAATAAGCTCCTTTTGCATTCTTGTTGTG CGCCTTGCTCTGGCGAAGTGATGGAAGCAATTCTTGCATCAGGCATTGAATTTACAATTTATTTTTATAATCCAAACATT CATCCACTCAAAGAATATTTGATTCGTAAAGAAGAAAATATCCGTTTTGCAAAAAAATTTGGTATTCCATTTATTGATGC TGATTACGATCGTCAAAATTGGTTTGATCGTGCTAAGGGTATGGAATGGGAGCCTGAAAGAGGTATTCGCTGCACAATGT GTTTTGATATGCGTTTTGAAAAAGCTGCTGAATATGCTCATAAACATGGTTTCCCTGTATTTACTAGTTGCCTAGGTATT TCTCGCTGGAAGGATATGAATCAAATCAATGGCTGTGGGCATCGTGCTGCGGAAAAATATGATGATGTTATTTATTGGGA TTATAACTGGCGCAAGGAAGGTGGCTCGCAACGCATGATTGAAATTAGTAAGCGTGAGCGGTTTTATCAACAGGAATATT GCGGTTGTGTGTATTCTTTACGTGATAGTAATAAATGGCGAGAAGAGACGGGTCGTCAAAAAATTGAAATCGGAAAATTA TATTATAGTGCTGATTAA
Upstream 100 bases:
>100_bases AACAAGCGTTGATTTCATTGGCATATTTGTCTGTAGATAGAAATTATTAGTCCATAATTTAGCTTATATACTTGATACCC ATTAATTTTAATTAAACTTT
Downstream 100 bases:
>100_bases AAATAGAAAAATAAAGGTGTTGTTTCACAGAATTTGCTGAACAGCACCTTTTATTTCACTATTTTATCACTTCATCTTGA TCATAATGATTAATTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MNTELQPKLEKSAVNFQAKPRKQKIRKDPNAPFIREKLELPDGHNKLLLHSCCAPCSGEVMEAILASGIEFTIYFYNPNI HPLKEYLIRKEENIRFAKKFGIPFIDADYDRQNWFDRAKGMEWEPERGIRCTMCFDMRFEKAAEYAHKHGFPVFTSCLGI SRWKDMNQINGCGHRAAEKYDDVIYWDYNWRKEGGSQRMIEISKRERFYQQEYCGCVYSLRDSNKWREETGRQKIEIGKL YYSAD
Sequences:
>Translated_245_residues MNTELQPKLEKSAVNFQAKPRKQKIRKDPNAPFIREKLELPDGHNKLLLHSCCAPCSGEVMEAILASGIEFTIYFYNPNI HPLKEYLIRKEENIRFAKKFGIPFIDADYDRQNWFDRAKGMEWEPERGIRCTMCFDMRFEKAAEYAHKHGFPVFTSCLGI SRWKDMNQINGCGHRAAEKYDDVIYWDYNWRKEGGSQRMIEISKRERFYQQEYCGCVYSLRDSNKWREETGRQKIEIGKL YYSAD >Mature_245_residues MNTELQPKLEKSAVNFQAKPRKQKIRKDPNAPFIREKLELPDGHNKLLLHSCCAPCSGEVMEAILASGIEFTIYFYNPNI HPLKEYLIRKEENIRFAKKFGIPFIDADYDRQNWFDRAKGMEWEPERGIRCTMCFDMRFEKAAEYAHKHGFPVFTSCLGI SRWKDMNQINGCGHRAAEKYDDVIYWDYNWRKEGGSQRMIEISKRERFYQQEYCGCVYSLRDSNKWREETGRQKIEIGKL YYSAD
Specific function: Unknown
COG id: COG1636
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y882_HAEIN (P44068)
Other databases:
- EMBL: L42023 - PIR: E64015 - RefSeq: NP_439043.1 - GeneID: 949886 - GenomeReviews: L42023_GR - KEGG: hin:HI0882 - TIGR: HI_0882 - HOGENOM: HBG430817 - OMA: GCIYSEK - ProtClustDB: CLSK2748109 - BioCyc: HINF71421:HI_0882-MONOMER - InterPro: IPR003828
Pfam domain/function: PF02677 DUF208
EC number: NA
Molecular weight: Translated: 29072; Mature: 29072
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTELQPKLEKSAVNFQAKPRKQKIRKDPNAPFIREKLELPDGHNKLLLHSCCAPCSGEV CCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHCCCCCHHH MEAILASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAKKFGIPFIDADYDRQNWFDRAKG HHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCEEECCCCHHHHHHHHCC MEWEPERGIRCTMCFDMRFEKAAEYAHKHGFPVFTSCLGISRWKDMNQINGCGHRAAEKY CCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DDVIYWDYNWRKEGGSQRMIEISKRERFYQQEYCGCVYSLRDSNKWREETGRQKIEIGKL CCEEEECCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEE YYSAD EEECC >Mature Secondary Structure MNTELQPKLEKSAVNFQAKPRKQKIRKDPNAPFIREKLELPDGHNKLLLHSCCAPCSGEV CCCCCCCCHHHHHCCCCCCCHHHHHHCCCCCCHHHHHHCCCCCCCEEHHHHHCCCCCHHH MEAILASGIEFTIYFYNPNIHPLKEYLIRKEENIRFAKKFGIPFIDADYDRQNWFDRAKG HHHHHHCCCEEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCEEECCCCHHHHHHHHCC MEWEPERGIRCTMCFDMRFEKAAEYAHKHGFPVFTSCLGISRWKDMNQINGCGHRAAEKY CCCCCCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH DDVIYWDYNWRKEGGSQRMIEISKRERFYQQEYCGCVYSLRDSNKWREETGRQKIEIGKL CCEEEECCCCCCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEEE YYSAD EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023