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The map label for this gene is yhbE [C]

Identifier: 16272818

GI number: 16272818

Start: 931104

End: 932024

Strand: Reverse

Name: yhbE [C]

Synonym: HI0878

Alternate gene names: 16272818

Gene position: 932024-931104 (Counterclockwise)

Preceding gene: 16272819

Following gene: 16272817

Centisome position: 50.93

GC content: 35.94

Gene sequence:

>921_bases
ATGAAACAACAACCTTTATTAGGCTTTACCTTTGCGCTTATTACCGCTATGGCTTGGGGGTCATTGCCTATTGCCTTGAA
ACAAGTTTTGTCTGTAATGAATGCGCAAACTATCGTATGGTATCGTTTCATTATTGCTGCAGTTTCATTATTGGCTTTAC
TTGCTTATAAAAAACAATTACCTGAATTAATGAAAGTCCGCCAATATGCGTGGATTATGCTTATTGGAGTAATTGGTCTT
ACCAGCAATTTTCTATTATTTAGTAGCTCGCTGAATTACATTGAACCGTCAGTTGCACAAATTTTTATTCATTTATCCTC
TTTTGGAATGCTCATCTGTGGTGTACTGATTTTCAAAGAAAAATTAGGGTTGCACCAAAAGATCGGACTTTTCTTATTAT
TAATTGGTTTAGGCTTATTCTTTAATGATCGTTTTGATGCATTTGCTGGACTAAATCAGTATTCAACAGGTGTCATTTTA
GGTGTAGGGGGTGCTCTTATTTGGGTCGCTTATGGAATGGCGCAAAAATTAATGTTACGTAAATTTAATTCACAACAAAT
CTTGCTAATGATGTATTTAGGTTGTGCCATAGCCTTTATGCCGATGGCTGACTTCTCGCAAGTACAAGAACTCACACCTT
TAGCTCTGATTTGTTTTATTTACTGCTGTTTAAATACCTTAATTGGATACGGCTCTTATGCGGAAGCACTTAATCGTTGG
GATGTATCAAAAGTCAGTGTTGTTATCACACTTGTACCTCTTTTCACGATCCTATTTTCTCATATTGCGCATTATTTTAG
CCCAGCAGATTTTGCGGCACCGGAATTGAATAATATTAGCTATATTGGCGCATTTGTTGTAGTATGCGGAGCAATTTTAT
CCGCAATTGGACATAAATTATTACCGCATAAAAATCATTAA

Upstream 100 bases:

>100_bases
TAGTTATTGTTACTGAATAATTTAAAATCTATTCCATTGAAACGCCCTACAATTTTMTGGGGCGTTTTGTCTTTTTTAAT
TTCACATAAGCGAGCAAACA

Downstream 100 bases:

>100_bases
AGTGCGGTTTATTTTGGAGAAGTTTTAATGAAATTTATTGATGAATCCCTTATTCGAATTGAGGCTGGGGATGGTGGTAA
CGGTTGCGTAAGTTTCCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TSNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIAFMPMADFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAILSAIGHKLLPHKNH

Sequences:

>Translated_306_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TSNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIAFMPMADFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAILSAIGHKLLPHKNH
>Mature_306_residues
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQLPELMKVRQYAWIMLIGVIGL
TSNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKEKLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVIL
GVGGALIWVAYGMAQKLMLRKFNSQQILLMMYLGCAIAFMPMADFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAILSAIGHKLLPHKNH

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains

Homologues:

Organism=Escherichia coli, GI1789575, Length=303, Percent_Identity=49.1749174917492, Blast_Score=286, Evalue=1e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y878_HAEIN (P71360)

Other databases:

- EMBL:   L42023
- RefSeq:   NP_439039.1
- GeneID:   949421
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0878
- NMPDR:   fig|71421.1.peg.845
- TIGR:   HI_0878
- HOGENOM:   HBG537680
- OMA:   IAFNITI
- ProtClustDB:   CLSK870063
- BioCyc:   HINF71421:HI_0878-MONOMER
- GO:   GO:0006810
- InterPro:   IPR000620

Pfam domain/function: PF00892 DUF6

EC number: NA

Molecular weight: Translated: 33893; Mature: 33893

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd970548)-; HASH(0xbec4920)-; HASH(0xc3b09a0)-; HASH(0xdb68a24)-; HASH(0xd6b54d0)-; HASH(0xdb756f4)-; HASH(0xc94c83c)-; HASH(0xdb79c60)-; HASH(0xd99872c)-; HASH(0xd41f8b0)-;

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELMKVRQYAWIMLIGVIGLTSNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVILGVGGALIWVAYGMAQKLMLR
HHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCEEEECHHHHHHHHHHHHHHHHHH
KFNSQQILLMMYLGCAIAFMPMADFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
HCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAILSAIGHKL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPHKNH
CCCCCH
>Mature Secondary Structure
MKQQPLLGFTFALITAMAWGSLPIALKQVLSVMNAQTIVWYRFIIAAVSLLALLAYKKQL
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELMKVRQYAWIMLIGVIGLTSNFLLFSSSLNYIEPSVAQIFIHLSSFGMLICGVLIFKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KLGLHQKIGLFLLLIGLGLFFNDRFDAFAGLNQYSTGVILGVGGALIWVAYGMAQKLMLR
HHCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHCCCEEEECHHHHHHHHHHHHHHHHHH
KFNSQQILLMMYLGCAIAFMPMADFSQVQELTPLALICFIYCCLNTLIGYGSYAEALNRW
HCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
DVSKVSVVITLVPLFTILFSHIAHYFSPADFAAPELNNISYIGAFVVVCGAILSAIGHKL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
LPHKNH
CCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800