BacMap

Definition	Haemophilus influenzae Rd KW20 chromosome, complete genome.
Accession	NC_000907
Length	1,830,138

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The map label for this gene is srmB

Identifier: 16272370

GI number: 16272370

Start: 444029

End: 445348

Strand: Reverse

Name: srmB

Synonym: HI0422

Alternate gene names: 16272370

Gene position: 445348-444029 (Counterclockwise)

Preceding gene: 16272372

Following gene: 16272361

Centisome position: 24.33

GC content: 41.59

Gene sequence:

>1320_bases
ATGAATTTATCCCAATTTGAACAATTCGATCTTTCTCCTGAGCTTTTAAAGGCACTTGAGAAAAAAGGTTATTCCCGCCC
AACAGCTATTCAAATGGAAGCCATTCCTGCCGCAATGGAAGAGAGTGATGTATTAGGCTCGGCACCAACGGGAACAGGGA
AAACTGCTGCTTTTTTATTACCTGCGCTACAACATTTATTGGATTATCCACGCCGTAAACCAGGCCCACCACGTATTTTG
GTATTAACACCAACCCGTGAACTGGCAATGCAAGTGGCTGAACAAGCGGAAGAATTAGCGCAGTTCACCCATTTAAATAT
TGCGACAATTACAGGTGGCGTGGCGTATCAAAATCACGGTGATGTATTCAATACCAATCAAGATTTGGTGGTGGCTACGC
CAGGCCGTTTGTTGCAATACATTAAGGAAGAAAATTTTGATTGCCGTTCCGTTGAAATGCTGATTTTTGATGAAGCCGAT
AGAATGTTGCAAATGGGATTTGGGCAAGATGCGGAAAAAATTGCAGCTGAAACCCGTTGGCGAAAACAAACTTTGTTGTT
TTCTGCAACCTTAGAAGGAGAGTTATTGGTCGATTTCGCGGAGCGTTTATTGAATGATCCTGTGAAAGTAGATGCGGAAC
CAAGTCGCCGTGAAAGAAAAAAAATCAATCAATGGTATTATCACGCAGACAGCAATGAACACAAAATCAAATTGCTCGCG
CGTTTTATTGAAACTGAAGAAGTAACCCGTGGAATTGTGTTTATTCGTCGTCGTGAAGATGCACGTGAACTTTCCGAAAC
ATTGCGTAAACGAGGCATTCGTTCCGCATATTTAGAAGGCGAAATGGCACAAACTCAACGTAACAATGCCATTGATAAAT
TGAAATCAGGTATTGTGACGGTATTGGTTGCAACAGATGTGGCTGCACGTGGTATTGATATTGACGATGTAAGCCACGTG
ATGAATTTTGATTTGCCCTATAGTGCGGATACTTATTTGCATCGAATTGGACGTACCGCGCGAGCTGGCAAAAAAGGCAC
GGCAGTCTCTTTTGTCGAAGCGCATGATTACAAGTTGCTAGGTAAAATCAAACGTTATACTGAGGAAATTTTAAAGGCAC
GCATTTTAGCAGGTTTAGAACCTCGCACTAAGCCACCAAAAGATGGCGAAGTGAAATCTGTCAGCAAAAAACAAAAGGCA
CGCATTAAAGAAAAACGTGAAGAAAAGAAAAAAACAGAGGCAAAGAAAAAAGTAAAATTGCGTCATAAGGATACGAAAAA
TATCGGCAAACGACGCAAGCCAAGTAACAGTAATGTTTAG

Upstream 100 bases:

>100_bases
TATGGAACTGTTTAAAGGTAAATCTGCTCATAAATTTTTCGTAAATTGACCGCACTTTCAGGTATAATCCTCGACAATTT
TAACAAAGAACCGCACAATA

Downstream 100 bases:

>100_bases
GCTTGTATAGTATAGCTTTGCTTTGTTCTAGTTCAATTTAATAATCTTAAATAATTAAGGATTTCTTATGAAAAAAAATT
TATAGGCTTCGTTTCGCACA

Product: ATP-dependent RNA helicase SrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV

Sequences:

>Translated_439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV
>Mature_439_residues
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLLPALQHLLDYPRRKPGPPRIL
VLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEAD
RMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVTVLVATDVAARGIDIDDVSHV
MNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV

Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Homo sapiens, GI224593278, Length=382, Percent_Identity=38.2198952879581, Blast_Score=236, Evalue=2e-62,
Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=35.149863760218, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=35.149863760218, Blast_Score=235, Evalue=5e-62,
Organism=Homo sapiens, GI20149629, Length=434, Percent_Identity=34.1013824884793, Blast_Score=234, Evalue=2e-61,
Organism=Homo sapiens, GI164419743, Length=350, Percent_Identity=37.1428571428571, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI51094101, Length=350, Percent_Identity=37.1428571428571, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI31542656, Length=449, Percent_Identity=34.7438752783964, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI41327771, Length=387, Percent_Identity=32.5581395348837, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=34.0782122905028, Blast_Score=212, Evalue=5e-55,
Organism=Homo sapiens, GI7661920, Length=361, Percent_Identity=31.5789473684211, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI148613856, Length=382, Percent_Identity=32.4607329842932, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI38201710, Length=382, Percent_Identity=32.4607329842932, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI222352149, Length=369, Percent_Identity=33.8753387533875, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI188035877, Length=378, Percent_Identity=34.6560846560847, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI41327773, Length=380, Percent_Identity=32.6315789473684, Blast_Score=206, Evalue=5e-53,
Organism=Homo sapiens, GI41327776, Length=434, Percent_Identity=32.0276497695853, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI55749865, Length=361, Percent_Identity=32.9639889196676, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI8922886, Length=377, Percent_Identity=33.42175066313, Blast_Score=199, Evalue=4e-51,
Organism=Homo sapiens, GI6005743, Length=377, Percent_Identity=33.6870026525199, Blast_Score=199, Evalue=5e-51,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=33.983286908078, Blast_Score=197, Evalue=1e-50,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=34.5403899721448, Blast_Score=196, Evalue=4e-50,
Organism=Homo sapiens, GI21040371, Length=367, Percent_Identity=31.8801089918256, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=34.5403899721448, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=34.5403899721448, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI21071032, Length=373, Percent_Identity=31.3672922252011, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI4758112, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI18375623, Length=367, Percent_Identity=32.1525885558583, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=31.7548746518106, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI301171467, Length=370, Percent_Identity=32.7027027027027, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI87196351, Length=370, Percent_Identity=32.7027027027027, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI301171475, Length=370, Percent_Identity=32.7027027027027, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI62241022, Length=356, Percent_Identity=33.9887640449438, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=33.0645161290323, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=33.0645161290323, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13514831, Length=352, Percent_Identity=34.6590909090909, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI83700235, Length=366, Percent_Identity=31.4207650273224, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI9506931, Length=457, Percent_Identity=31.0722100656455, Blast_Score=182, Evalue=6e-46,
Organism=Homo sapiens, GI38569503, Length=380, Percent_Identity=31.5789473684211, Blast_Score=181, Evalue=8e-46,
Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=32.3450134770889, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI4503529, Length=366, Percent_Identity=31.1475409836066, Blast_Score=178, Evalue=8e-45,
Organism=Homo sapiens, GI62241024, Length=334, Percent_Identity=33.8323353293413, Blast_Score=173, Evalue=3e-43,
Organism=Homo sapiens, GI164419732, Length=364, Percent_Identity=31.043956043956, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI50659095, Length=370, Percent_Identity=31.0810810810811, Blast_Score=166, Evalue=5e-41,
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=29.4429708222812, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=32.6347305389222, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=34.5013477088949, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=30.6179775280899, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI9966805, Length=327, Percent_Identity=30.8868501529052, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI17505907, Length=403, Percent_Identity=28.0397022332506, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI154759257, Length=410, Percent_Identity=29.2682926829268, Blast_Score=138, Evalue=1e-32,
Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=27.893175074184, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI256773275, Length=417, Percent_Identity=28.7769784172662, Blast_Score=113, Evalue=4e-25,
Organism=Homo sapiens, GI20336298, Length=215, Percent_Identity=32.5581395348837, Blast_Score=102, Evalue=9e-22,
Organism=Escherichia coli, GI1788930, Length=439, Percent_Identity=66.0592255125285, Blast_Score=559, Evalue=1e-160,
Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=39.4179894179894, Blast_Score=272, Evalue=4e-74,
Organism=Escherichia coli, GI87082221, Length=363, Percent_Identity=41.0468319559229, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1790214, Length=375, Percent_Identity=37.3333333333333, Blast_Score=238, Evalue=7e-64,
Organism=Escherichia coli, GI1787605, Length=343, Percent_Identity=37.3177842565598, Blast_Score=205, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI17552642, Length=371, Percent_Identity=35.3099730458221, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI17510559, Length=405, Percent_Identity=34.8148148148148, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI17555296, Length=361, Percent_Identity=36.8421052631579, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=392, Percent_Identity=36.4795918367347, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI71999646, Length=349, Percent_Identity=36.9627507163324, Blast_Score=224, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71999644, Length=349, Percent_Identity=36.9627507163324, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=32.409972299169, Blast_Score=219, Evalue=3e-57,
Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=32.1329639889197, Blast_Score=218, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI32565321, Length=394, Percent_Identity=34.010152284264, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI71987143, Length=366, Percent_Identity=32.5136612021858, Blast_Score=214, Evalue=5e-56,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=36.5269461077844, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17510307, Length=366, Percent_Identity=33.0601092896175, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17510309, Length=366, Percent_Identity=33.0601092896175, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI71995514, Length=366, Percent_Identity=33.0601092896175, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI17509811, Length=382, Percent_Identity=34.0314136125654, Blast_Score=202, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17537549, Length=368, Percent_Identity=33.4239130434783, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=402, Percent_Identity=32.089552238806, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507877, Length=379, Percent_Identity=32.4538258575198, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17552114, Length=386, Percent_Identity=30.3108808290155, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71995718, Length=366, Percent_Identity=32.5136612021858, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17507881, Length=382, Percent_Identity=31.151832460733, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI115532548, Length=380, Percent_Identity=31.8421052631579, Blast_Score=184, Evalue=6e-47,
Organism=Caenorhabditis elegans, GI115532546, Length=380, Percent_Identity=31.8421052631579, Blast_Score=184, Evalue=9e-47,
Organism=Caenorhabditis elegans, GI17507879, Length=381, Percent_Identity=31.758530183727, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71982858, Length=367, Percent_Identity=30.7901907356948, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17507641, Length=398, Percent_Identity=32.4120603015075, Blast_Score=174, Evalue=1e-43,
Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=31.496062992126, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=31.758530183727, Blast_Score=172, Evalue=4e-43,
Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=32.0209973753281, Blast_Score=170, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI17556951, Length=375, Percent_Identity=31.4666666666667, Blast_Score=166, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI25148203, Length=454, Percent_Identity=27.5330396475771, Blast_Score=162, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17505370, Length=343, Percent_Identity=32.6530612244898, Blast_Score=162, Evalue=3e-40,
Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=28.5333333333333, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=32, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI193206561, Length=349, Percent_Identity=29.2263610315186, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=382, Percent_Identity=29.8429319371728, Blast_Score=152, Evalue=4e-37,
Organism=Caenorhabditis elegans, GI71990816, Length=387, Percent_Identity=29.9741602067183, Blast_Score=147, Evalue=9e-36,
Organism=Caenorhabditis elegans, GI17553716, Length=358, Percent_Identity=27.3743016759777, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI25148205, Length=381, Percent_Identity=26.509186351706, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=423, Percent_Identity=23.4042553191489, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI71982862, Length=220, Percent_Identity=31.8181818181818, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=44.9438202247191, Blast_Score=87, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.6404494382022, Blast_Score=237, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321856, Length=380, Percent_Identity=35, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=33.0645161290323, Blast_Score=216, Evalue=7e-57,
Organism=Saccharomyces cerevisiae, GI6324217, Length=365, Percent_Identity=32.0547945205479, Blast_Score=210, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6321360, Length=368, Percent_Identity=34.7826086956522, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=363, Percent_Identity=33.6088154269972, Blast_Score=195, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=31.8681318681319, Blast_Score=194, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6324778, Length=377, Percent_Identity=30.7692307692308, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6323947, Length=371, Percent_Identity=33.6927223719677, Blast_Score=188, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6321963, Length=380, Percent_Identity=34.2105263157895, Blast_Score=187, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6320449, Length=389, Percent_Identity=31.8766066838046, Blast_Score=187, Evalue=3e-48,
Organism=Saccharomyces cerevisiae, GI6322427, Length=357, Percent_Identity=33.3333333333333, Blast_Score=186, Evalue=9e-48,
Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=31.4917127071823, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=31.4917127071823, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6324620, Length=380, Percent_Identity=30, Blast_Score=184, Evalue=3e-47,
Organism=Saccharomyces cerevisiae, GI6320119, Length=384, Percent_Identity=31.25, Blast_Score=183, Evalue=5e-47,
Organism=Saccharomyces cerevisiae, GI6319618, Length=406, Percent_Identity=29.8029556650246, Blast_Score=173, Evalue=5e-44,
Organism=Saccharomyces cerevisiae, GI6323306, Length=415, Percent_Identity=28.6746987951807, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6321267, Length=360, Percent_Identity=31.6666666666667, Blast_Score=164, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320173, Length=210, Percent_Identity=40.9523809523809, Blast_Score=157, Evalue=3e-39,
Organism=Saccharomyces cerevisiae, GI6320400, Length=447, Percent_Identity=29.7539149888143, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6319714, Length=473, Percent_Identity=28.1183932346723, Blast_Score=152, Evalue=1e-37,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=28.0653950953678, Blast_Score=144, Evalue=4e-35,
Organism=Saccharomyces cerevisiae, GI6324366, Length=355, Percent_Identity=25.9154929577465, Blast_Score=118, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6322876, Length=184, Percent_Identity=29.8913043478261, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21356161, Length=377, Percent_Identity=38.1962864721485, Blast_Score=251, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24662330, Length=368, Percent_Identity=35.3260869565217, Blast_Score=236, Evalue=2e-62,
Organism=Drosophila melanogaster, GI28574962, Length=351, Percent_Identity=36.1823361823362, Blast_Score=228, Evalue=8e-60,
Organism=Drosophila melanogaster, GI24584399, Length=354, Percent_Identity=35.3107344632768, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI21355075, Length=359, Percent_Identity=34.8189415041783, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI28575014, Length=354, Percent_Identity=36.7231638418079, Blast_Score=220, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=7e-57,
Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=34.2541436464088, Blast_Score=218, Evalue=9e-57,
Organism=Drosophila melanogaster, GI24642151, Length=380, Percent_Identity=33.4210526315789, Blast_Score=215, Evalue=4e-56,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=34.4444444444444, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24645031, Length=361, Percent_Identity=32.409972299169, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24584994, Length=385, Percent_Identity=34.025974025974, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24583281, Length=367, Percent_Identity=32.9700272479564, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24583279, Length=367, Percent_Identity=32.9700272479564, Blast_Score=201, Evalue=9e-52,
Organism=Drosophila melanogaster, GI18857967, Length=365, Percent_Identity=31.2328767123288, Blast_Score=197, Evalue=1e-50,
Organism=Drosophila melanogaster, GI17985987, Length=372, Percent_Identity=34.6774193548387, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI17977678, Length=362, Percent_Identity=31.4917127071823, Blast_Score=189, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24581954, Length=367, Percent_Identity=32.425068119891, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581952, Length=367, Percent_Identity=32.425068119891, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI24581956, Length=367, Percent_Identity=32.425068119891, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17136814, Length=375, Percent_Identity=34.9333333333333, Blast_Score=184, Evalue=9e-47,
Organism=Drosophila melanogaster, GI24666101, Length=437, Percent_Identity=31.5789473684211, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI281365720, Length=312, Percent_Identity=34.6153846153846, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI24642822, Length=367, Percent_Identity=33.5149863760218, Blast_Score=177, Evalue=2e-44,
Organism=Drosophila melanogaster, GI24582080, Length=361, Percent_Identity=30.1939058171745, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24582078, Length=361, Percent_Identity=30.1939058171745, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI17136248, Length=361, Percent_Identity=30.1939058171745, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI24582075, Length=361, Percent_Identity=30.1939058171745, Blast_Score=175, Evalue=5e-44,
Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=33.0687830687831, Blast_Score=163, Evalue=2e-40,
Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=29.3628808864266, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=29.3628808864266, Blast_Score=160, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=29.8469387755102, Blast_Score=158, Evalue=8e-39,
Organism=Drosophila melanogaster, GI20130173, Length=456, Percent_Identity=27.1929824561404, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI17647335, Length=356, Percent_Identity=27.8089887640449, Blast_Score=149, Evalue=3e-36,
Organism=Drosophila melanogaster, GI17136666, Length=399, Percent_Identity=30.8270676691729, Blast_Score=139, Evalue=4e-33,
Organism=Drosophila melanogaster, GI19920478, Length=359, Percent_Identity=28.9693593314763, Blast_Score=129, Evalue=5e-30,
Organism=Drosophila melanogaster, GI24640164, Length=376, Percent_Identity=24.7340425531915, Blast_Score=115, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24668515, Length=338, Percent_Identity=28.9940828402367, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18859659, Length=225, Percent_Identity=31.1111111111111, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28571338, Length=225, Percent_Identity=31.1111111111111, Blast_Score=88, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRMB_HAEIN (P44701)

Other databases:

- EMBL:   L42023
- PIR:   H64066
- RefSeq:   NP_438583.1
- ProteinModelPortal:   P44701
- GeneID:   949526
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0422
- NMPDR:   fig|71421.1.peg.396
- TIGR:   HI_0422
- HOGENOM:   HBG737336
- OMA:   LVEAHDY
- ProtClustDB:   PRK11192
- BioCyc:   HINF71421:HI_0422-MONOMER
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014
- SMART:   SM00487
- SMART:   SM00490

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C

EC number: =3.6.4.13

Molecular weight: Translated: 49806; Mature: 49806

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS00039 DEAD_ATP_HELICASE; PS51192 HELICASE_ATP_BIND_1; PS51194 HELICASE_CTER; PS51195 Q_MOTIF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLL
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECCCC
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
CCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
HHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHH
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEE
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREEKKKTEAKKKVKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHKDTKNIGKRRKPSNSNV
HCCCHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPTGTGKTAAFLL
CCCCHHHHCCCCHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHH
PALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELAQFTHLNIATITGGVAYQNHG
HHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEEECCEEECCCC
DVFNTNQDLVVATPGRLLQYIKEENFDCRSVEMLIFDEADRMLQMGFGQDAEKIAAETRW
CCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHCCCCCHHHHHHHHHH
RKQTLLFSATLEGELLVDFAERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLA
HHHHEEEEECCCCHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHEEECCCCCHHHHHHH
RFIETEEVTRGIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCEE
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYKLL
EEEEHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHH
GKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKARIKEKREEKKKTEAKKKVKL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHKDTKNIGKRRKPSNSNV
HCCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800