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The map label for this gene is dinG [C]

Identifier: 16272335

GI number: 16272335

Start: 407000

End: 408922

Strand: Direct

Name: dinG [C]

Synonym: HI0387

Alternate gene names: 16272335

Gene position: 407000-408922 (Clockwise)

Preceding gene: 16272318

Following gene: 16272336

Centisome position: 22.24

GC content: 36.77

Gene sequence:

>1923_bases
ATGGATTACGAAAATCAAATTGCCAATATTTTCTCACTAAATGGCGAATTAAGCCAAAATATCAAAGGTTTTCGTCCTCG
AGCTGAACAACTTGAAATGGCATATGCTGTAGGTAAAGCAATTCAAAATAAATCTTCCCTTGTTATTGAAGCTGGAACGG
GTACAGGAAAAACCTTTGCATATCTCGCACCTGCTTTAGTTTTTGGTAAAAAAACCATTATTTCTACAGGATCTAAAAAT
CTTCAAGATCAGCTTTTTAATCGAGATCTTCCAGCTATTAAAAAAGCCCTTAATTTCACGGGAAAAATTGCGTTGCTAAA
AGGTCGGGCAAACTATCTTTGTTTAGAGCGTTTAGATCAAGTGATTGCTCAAGGTGTGCTTGGAGATAAGTCTGTTTTAG
CTGAATTAAGTAAAGTACGAAAATGGAATAATAGTACTAAAACAGGCGATTTCACAGAATGTATCGAGCTTGCAGAAGAT
AGCCCAATTATTCCTCAACTGACGAGTACAGCGGAAAGTTGTTTAGGCACCGATTGCCCTAATTATTCAGAATGTTATGT
AGCAAGTGCGCGTAAAAAAGCATTAAATGCGGATTTGGTTGTAGTTAATCATCATTTATTTTTTGCTGATATGGCTGTGA
AAGAAAGTGGTTTTGGCGAACTTATTCCAAATGCAGAAGTGATTATTTTTGACGAAGCTCATCAGTTACCCGATATTGCC
AGTCAATATTTTGGTCAATCTTTAACATCACGCCAGCTTTTTGATTTGTGTAAGGATATTAATATTGTTTACCGCACAGA
ACTTAAAGATATGCAGCAGCTTGGCACAACATCTGATACCTTACTGAAAGTGGTACAAGATTTTCGTTTATTACTGGGTA
ATGGGAGTAATGTTCGAGGAAATTGGCGTGAGCTTTACACGCAAAGTGCGGTGAAAAAAGCCTTTGAATTATTACAAGAG
AAAATAGATTTTTTATCTGAAGTAATTAAATTAGCACTTGGTCGTTCCCAAACTTTAGACAGTATTTTTGAGCGTGTTGA
GTCCATTAAAATCCAACTCAAACGTTTATCTGAAACAAATATTGTGGGTTATTGTTATTGGTATGAAGGAAATGGTCGCC
AGTTTGGTTTACATATTACGCCATTGACAGTAGCTGATAAATTTGGTGCTCAGCTCGAAGCGAAAGAAGCCGCTTGGATA
TTCACATCTGCGACATTAGAAGTGGGGGGAACTTTTAATCATTTCTGCCAACGTTTAGGCATTGAAAATGCGACACAAAA
AATTTTATATAGTCCCTTTAATTATCCTGAACAATCTTTGCTTTGTGTGCCTCGATATTTGCCGAATACCAATCAAATGA
ATACATTAAATTCACTAGGCGAAATATTATTACCCGTGATTGAAGCAAACAAAGGGCGTTGTTTTGTTCTTTGCACTTCC
TATTCAATGATGCGTGGTTTAGCTGAATATTTCCGTGAAAAAAGTCATCTTTCGATTTTATTACAAGGCGAAACCTCAAA
AGGCAAATTACTCGAACAATTTATAAAAGAAACGCATAGCGTTTTGGTGGCAACTTCTAGCTTTTGGGAAGGTGTAGATG
TGCGAGGCGATGCACTTTCTTTAGTGATTATTGATAAACTTCCTTTTACTGCGCCAGATGAGCCTTTGTTGAAAGCTCGC
ATTGAGGATTGTCGTTTACAAGGTGGCGATCCATTCAATGATATTCAAATTCCTGAAGCGGTAATTACCTTGAAACAAGG
CGTTGGACGTTTAATTCGTGATGTTACAGATCGTGGCGTTGTGATTATTTGTGATAATCGATTAGTGATGCGCAATTATG
GCGAAACTTTTTTGAAAAGTTTACCTAACTCAAGTCGTACCCGTGATCTCAACAAAGTGATACAATTCTTACAAAATAAG
TAA

Upstream 100 bases:

>100_bases
CTCTATGTAATCTTAAGCCACCAGTATTTTTATTCTTGATATTTAGCGTTTCTATGCGACAATCTTTGCGGTTATTTACT
TTAAAAATATGTTTTACTAG

Downstream 100 bases:

>100_bases
ACGAGAATAAGAATGCAAAATTTAACTTTATTGGCGTTGGACACCTCTACTGAAGCCTGTTCTGTCGCTTTATTGTATCG
TGGTGAGAAAACACATATTA

Product: ATP-dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 640; Mature: 640

Protein sequence:

>640_residues
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIEAGTGTGKTFAYLAPALVFGKKTIISTGSKN
LQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAED
SPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIA
SQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRGNWRELYTQSAVKKAFELLQE
KIDFLSEVIKLALGRSQTLDSIFERVESIKIQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI
FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNTNQMNTLNSLGEILLPVIEANKGRCFVLCTS
YSMMRGLAEYFREKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFTAPDEPLLKAR
IEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK

Sequences:

>Translated_640_residues
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIEAGTGTGKTFAYLAPALVFGKKTIISTGSKN
LQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAED
SPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIA
SQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRGNWRELYTQSAVKKAFELLQE
KIDFLSEVIKLALGRSQTLDSIFERVESIKIQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI
FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNTNQMNTLNSLGEILLPVIEANKGRCFVLCTS
YSMMRGLAEYFREKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFTAPDEPLLKAR
IEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK
>Mature_640_residues
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIEAGTGTGKTFAYLAPALVFGKKTIISTGSKN
LQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAED
SPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIA
SQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRGNWRELYTQSAVKKAFELLQE
KIDFLSEVIKLALGRSQTLDSIFERVESIKIQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI
FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNTNQMNTLNSLGEILLPVIEANKGRCFVLCTS
YSMMRGLAEYFREKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFTAPDEPLLKAR
IEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGVVIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain

Homologues:

Organism=Escherichia coli, GI1788110, Length=631, Percent_Identity=60.6973058637084, Blast_Score=800, Evalue=0.0,
Organism=Escherichia coli, GI1787018, Length=257, Percent_Identity=31.9066147859922, Blast_Score=105, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y387_HAEIN (P44680)

Other databases:

- EMBL:   L42023
- PIR:   A64065
- RefSeq:   NP_438548.1
- ProteinModelPortal:   P44680
- GeneID:   949750
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0387
- NMPDR:   fig|71421.1.peg.361
- TIGR:   HI_0387
- HOGENOM:   HBG527643
- OMA:   RANYVCH
- ProtClustDB:   CLSK870213
- BioCyc:   HINF71421:HI_0387-MONOMER
- InterPro:   IPR014001
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650
- InterPro:   IPR006935
- SMART:   SM00487
- SMART:   SM00491

Pfam domain/function: PF04851 ResIII

EC number: =3.6.4.12

Molecular weight: Translated: 71532; Mature: 71532

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: PS00690 DEAH_ATP_HELICASE; PS51193 HELICASE_ATP_BIND_2; PS51194 HELICASE_CTER; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIEAGTGTGKTFA
CCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
YLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQ
HHHHHHHHCCHHEECCCCCHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
VIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAEDSPIIPQLTSTAESCLGTDCP
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
NYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIA
CCHHHHHHHHHHHHCCCCEEEEECEEEEHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
SQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRG
HHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
NWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRSQTLDSIFERVESIKIQLKRLSETN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
IVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWIFTSATLEVGGTFNHFCQRLG
EEEEEEEEECCCEEEEEEEEEEHHHHHHCCCEECCCEEEEEEEEEEEECCCHHHHHHHHC
IENATQKILYSPFNYPEQSLLCVPRYLPNTNQMNTLNSLGEILLPVIEANKGRCFVLCTS
CCCHHHHHEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
YSMMRGLAEYFREKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALS
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEECHHCCCCCCCCCEEE
LVIIDKLPFTAPDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGV
EEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
VIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK
EEEECCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIEAGTGTGKTFA
CCCHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHH
YLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFTGKIALLKGRANYLCLERLDQ
HHHHHHHHCCHHEECCCCCHHHHHHHCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHH
VIAQGVLGDKSVLAELSKVRKWNNSTKTGDFTECIELAEDSPIIPQLTSTAESCLGTDCP
HHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC
NYSECYVASARKKALNADLVVVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIA
CCHHHHHHHHHHHHCCCCEEEEECEEEEHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHH
SQYFGQSLTSRQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRG
HHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
NWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRSQTLDSIFERVESIKIQLKRLSETN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCC
IVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWIFTSATLEVGGTFNHFCQRLG
EEEEEEEEECCCEEEEEEEEEEHHHHHHCCCEECCCEEEEEEEEEEEECCCHHHHHHHHC
IENATQKILYSPFNYPEQSLLCVPRYLPNTNQMNTLNSLGEILLPVIEANKGRCFVLCTS
CCCHHHHHEECCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC
YSMMRGLAEYFREKSHLSILLQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALS
HHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHEEEEECHHCCCCCCCCCEEE
LVIIDKLPFTAPDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGV
EEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCE
VIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK
EEEECCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800