| Definition | Haemophilus influenzae Rd KW20 chromosome, complete genome. |
|---|---|
| Accession | NC_000907 |
| Length | 1,830,138 |
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The map label for this gene is yfgM [C]
Identifier: 16272318
GI number: 16272318
Start: 393962
End: 394576
Strand: Direct
Name: yfgM [C]
Synonym: HI0370
Alternate gene names: 16272318
Gene position: 393962-394576 (Clockwise)
Preceding gene: 16272317
Following gene: 16272335
Centisome position: 21.53
GC content: 36.75
Gene sequence:
>615_bases ATGGCTTATTCCATTGAAGAAGAACAAGAGATTAACCAGTTAAAAGACTGGTGGAAAGAGAATGGCAAAACAATTATTGT CGCTTTTATCTTAGGTGTGGGTGGTATGTTTGGATGGCGTTATTGGCAAACTCACCAAGCAGAACAAATCGCTCAAGCTT CTGCACAATACGATACTTTAATTAATTCTGTGCAACAAGACGAACAGGCTAAAAAAGCAAATATAGAACAATTTGTGCAA GCGAATAGCAAAACTGCATACGCTGTATTTGCTTTGTTAGATGAAGCGAAAAAAGCCACTGAAAAACAAGATTTTTCAGC AGCAGAAGCAAATTTAAACCAAGCATTAACCCAATCTCAAGATGAAGTATTAACATCTATTGTTGCATTACGTCTAAGTG CGGTGCAATTCCAATTAGGCCAATTAGATAATGCTTTAAGCACATTAAACCAAGTGAAAGGCGAAAGTTTTAATGCTCGC AAAGCGATTTTAACGGGCGATATCCAAGTTGCAAAAGGAGATAAAGTTGCGGCGAAAAACAGCTTTGAGCAAGCACAACA AAGTGGTAGCCAATTAGAACAACAAATGGCAAAAATGAAATTAAACAATCTTTAA
Upstream 100 bases:
>100_bases GTTGTTAAACACTTACAAGGTGGCACAGATCAGCAAACCTTAGATTTAGTGAATATAATCGACTATCTTCAAACTCAATT TTAATTTAAAAGGGGAAAAC
Downstream 100 bases:
>100_bases AAAATAATACCCGCATCAAAGTGCGGGTATTTTTTCAATCAAATTTCTGATTATTCAAATTCATCTAACCATTTTAATAA AATAGCCTCAAGAATTGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MAYSIEEEQEINQLKDWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTLINSVQQDEQAKKANIEQFVQ ANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQALTQSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGESFNAR KAILTGDIQVAKGDKVAAKNSFEQAQQSGSQLEQQMAKMKLNNL
Sequences:
>Translated_204_residues MAYSIEEEQEINQLKDWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTLINSVQQDEQAKKANIEQFVQ ANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQALTQSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGESFNAR KAILTGDIQVAKGDKVAAKNSFEQAQQSGSQLEQQMAKMKLNNL >Mature_203_residues AYSIEEEQEINQLKDWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTLINSVQQDEQAKKANIEQFVQA NSKTAYAVFALLDEAKKATEKQDFSAAEANLNQALTQSQDEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGESFNARK AILTGDIQVAKGDKVAAKNSFEQAQQSGSQLEQQMAKMKLNNL
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family
Homologues:
Organism=Escherichia coli, GI1788860, Length=199, Percent_Identity=36.6834170854271, Blast_Score=125, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y370_HAEIN (P43989)
Other databases:
- EMBL: L42023 - PIR: G64006 - RefSeq: NP_438531.1 - GeneID: 949833 - GenomeReviews: L42023_GR - KEGG: hin:HI0370 - NMPDR: fig|71421.1.peg.344 - TIGR: HI_0370 - HOGENOM: HBG700656 - OMA: DFLVRQG - ProtClustDB: CLSK870699 - BioCyc: HINF71421:HI_0370-MONOMER - GO: GO:0005488 - InterPro: IPR018704 - InterPro: IPR011990 - Gene3D: G3DSA:1.25.40.10
Pfam domain/function: PF09976 DUF2133
EC number: NA
Molecular weight: Translated: 22665; Mature: 22533
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc8ada68)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSIEEEQEINQLKDWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTL CCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INSVQQDEQAKKANIEQFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQALTQSQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGESFNARKAILTGDIQVAKGDKVAAKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCEEECCCCCHHHHH SFEQAQQSGSQLEQQMAKMKLNNL HHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure AYSIEEEQEINQLKDWWKENGKTIIVAFILGVGGMFGWRYWQTHQAEQIAQASAQYDTL CCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INSVQQDEQAKKANIEQFVQANSKTAYAVFALLDEAKKATEKQDFSAAEANLNQALTQSQ HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH DEVLTSIVALRLSAVQFQLGQLDNALSTLNQVKGESFNARKAILTGDIQVAKGDKVAAKN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCEEECCCCCHHHHH SFEQAQQSGSQLEQQMAKMKLNNL HHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023