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The map label for this gene is yfhP [C]

Identifier: 16272327

GI number: 16272327

Start: 400455

End: 400907

Strand: Reverse

Name: yfhP [C]

Synonym: HI0379

Alternate gene names: 16272327

Gene position: 400907-400455 (Counterclockwise)

Preceding gene: 16272328

Following gene: 30995370

Centisome position: 21.91

GC content: 35.76

Gene sequence:

>453_bases
ATGAAACTTACATCGAAAGGTCGTTATGCAGTTACAGCCGTTTTAGATATTGCTTTAAATGCAGATGGCGGGCCTGTAAG
CCTTGCGGATATTTCTGAACGCCAACATATTTCCTTATCTTATTTAGAGCAACTTTTTGCTAAATTACGTAAAGACGGTT
TAGTCAAAAGTGTTCGCGGGCCAGGAGGTGGTTATCAGTTAGGGCTACCAAGTGAACAAATTTCTGTAGGAATGATTATT
GCGGCAGTAAATGAAAATATTCACGTAACGAAATGTCTGGGGCGTGAAAATTGTAAAAATGGTGTGGAATGTTTAACTCA
CGAACTTTGGGAAGATTTAAGTTTACGTATTGAAAGTTTTTTAAATGAGATTACGTTAGCAGAGCTGGTAAATAAGCGTA
ATGTAAAACGTCAATCTCATCGTGATTTTAATAATTTATTAGTTAATCAATAA

Upstream 100 bases:

>100_bases
CTAAGTGCGGTTGAAAAACGAATTGATTTAACAAAAGAGGATAATTGACTAAATTAGTCAGATATGTAAGTATTGCGCAA
TTAATTTTTAGGGATTCTTT

Downstream 100 bases:

>100_bases
AAAAGATAAGCAGTATATTTTTTAATAAAAAAGTGCGGTTATATTTAGCATAATTTAGGAGTGAAAATGAAATTACCTAT
TTATTTAGACTACGCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLRKDGLVKSVRGPGGGYQLGLPSEQISVGMII
AAVNENIHVTKCLGRENCKNGVECLTHELWEDLSLRIESFLNEITLAELVNKRNVKRQSHRDFNNLLVNQ

Sequences:

>Translated_150_residues
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLRKDGLVKSVRGPGGGYQLGLPSEQISVGMII
AAVNENIHVTKCLGRENCKNGVECLTHELWEDLSLRIESFLNEITLAELVNKRNVKRQSHRDFNNLLVNQ
>Mature_150_residues
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLRKDGLVKSVRGPGGGYQLGLPSEQISVGMII
AAVNENIHVTKCLGRENCKNGVECLTHELWEDLSLRIESFLNEITLAELVNKRNVKRQSHRDFNNLLVNQ

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain

Homologues:

Organism=Escherichia coli, GI1788880, Length=141, Percent_Identity=63.8297872340426, Blast_Score=172, Evalue=1e-44,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): Y379_HAEIN (P44675)

Other databases:

- EMBL:   L42023
- PIR:   F64150
- RefSeq:   NP_438540.1
- ProteinModelPortal:   P44675
- GeneID:   949480
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0379
- NMPDR:   fig|71421.1.peg.353
- TIGR:   HI_0379
- HOGENOM:   HBG725923
- OMA:   QHISLSY
- ProtClustDB:   CLSK870050
- BioCyc:   HINF71421:HI_0379-MONOMER
- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10
- TIGRFAMs:   TIGR02010
- TIGRFAMs:   TIGR00738

Pfam domain/function: PF02082 Rrf2

EC number: NA

Molecular weight: Translated: 16613; Mature: 16613

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: PS01332 HTH_RRF2_1; PS51197 HTH_RRF2_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLRKDGLVKSVRG
CCCCCCCCEEHEEEEEEEECCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC
PGGGYQLGLPSEQISVGMIIAAVNENIHVTKCLGRENCKNGVECLTHELWEDLSLRIESF
CCCCEECCCCHHHHHHEEEEEEECCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
LNEITLAELVNKRNVKRQSHRDFNNLLVNQ
HHHHHHHHHHHHHCCHHHHHCCHHHHCCCC
>Mature Secondary Structure
MKLTSKGRYAVTAVLDIALNADGGPVSLADISERQHISLSYLEQLFAKLRKDGLVKSVRG
CCCCCCCCEEHEEEEEEEECCCCCCEEHHCCCCCCCCCHHHHHHHHHHHHHCCCHHHCCC
PGGGYQLGLPSEQISVGMIIAAVNENIHVTKCLGRENCKNGVECLTHELWEDLSLRIESF
CCCCEECCCCHHHHHHEEEEEEECCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
LNEITLAELVNKRNVKRQSHRDFNNLLVNQ
HHHHHHHHHHHHHCCHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800