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The map label for this gene is ychJ [C]

Identifier: 16272235

GI number: 16272235

Start: 312108

End: 312593

Strand: Reverse

Name: ychJ [C]

Synonym: HI0277

Alternate gene names: 16272235

Gene position: 312593-312108 (Counterclockwise)

Preceding gene: 16272237

Following gene: 16272234

Centisome position: 17.08

GC content: 38.48

Gene sequence:

>486_bases
ATGTCAGAAATTTCAACCGCGCTTTCTTTAGAAAATTGTCCATGTCAATCTAGCCATCATTACGCAGATTGTTGTGGCAA
ATTTCATTTGAGACAAGCATTTCCCGAAACGGCAGAGCAACTTATGCGTTCACGTTATACGGCTTATGTGTTAAAAAATA
TTCCCTATATTGTTGTAACAACTGTGCCAAGCCAACAAACTTTATTAAAGCCTAGGTTATTGCAAGAATGGGCTGACAAC
ACTACGTGGCTAGGATTAGAAATTCTAAAAACGGAAAGCCTTACAAAAACTCAAAGTGCGGTGGAATTTAAGGCGATTTT
TCAAGGCGAAGAATGTGAGCAAGCCCATCAAGAACGGTCAATTTTTGTGAAAATTGAAGATCGTTGGTATTTTGTGGATC
CGACCGTATCATTACCGACAATGAAACAACCTTGTGTCTGTGGTTCGGGTAAAAAATTTAAACATTGTTGTGGAGGATTT
CTATGA

Upstream 100 bases:

>100_bases
AAGCTGAATTAGATTCAGCATTAGAGATTGAAGTATTAGCTGAAGCCTTTAAACGCTCAATTCGATCGCAAATATCGAAA
TTCAAACAACAGGGATAAAT

Downstream 100 bases:

>100_bases
TTTCATTAAAAAATTTTGGATTATTATTTTGGAAACGTTTTTCAGAAAATAAACTTAATCAAGTAGCTGGCGCATTGACT
TATAGCACAATGTTAGCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSEISTALSLENCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADN
TTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGF
L

Sequences:

>Translated_161_residues
MSEISTALSLENCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADN
TTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGF
L
>Mature_160_residues
SEISTALSLENCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVTTVPSQQTLLKPRLLQEWADNT
TWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERSIFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family

Homologues:

Organism=Escherichia coli, GI1787484, Length=148, Percent_Identity=37.1621621621622, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y277_HAEIN (P44609)

Other databases:

- EMBL:   L42023
- PIR:   I64146
- RefSeq:   NP_438446.1
- ProteinModelPortal:   P44609
- SMR:   P44609
- GeneID:   949404
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0277
- NMPDR:   fig|71421.1.peg.262
- TIGR:   HI_0277
- HOGENOM:   HBG609508
- OMA:   FTARWHD
- ProtClustDB:   PRK01752
- BioCyc:   HINF71421:HI_0277-MONOMER
- HAMAP:   MF_00612
- InterPro:   IPR004027
- InterPro:   IPR023006

Pfam domain/function: PF02810 SEC-C

EC number: NA

Molecular weight: Translated: 18372; Mature: 18241

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEISTALSLENCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVT
CCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE
TVPSQQTLLKPRLLQEWADNTTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERS
ECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCE
IFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
EEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
SEISTALSLENCPCQSSHHYADCCGKFHLRQAFPETAEQLMRSRYTAYVLKNIPYIVVT
CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEE
TVPSQQTLLKPRLLQEWADNTTWLGLEILKTESLTKTQSAVEFKAIFQGEECEQAHQERS
ECCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHCCE
IFVKIEDRWYFVDPTVSLPTMKQPCVCGSGKKFKHCCGGFL
EEEEECCEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800