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The map label for this gene is nagB [H]

Identifier: 16272108

GI number: 16272108

Start: 156725

End: 157537

Strand: Reverse

Name: nagB [H]

Synonym: HI0141

Alternate gene names: 16272108

Gene position: 157537-156725 (Counterclockwise)

Preceding gene: 16272109

Following gene: 16272107

Centisome position: 8.61

GC content: 38.25

Gene sequence:

>813_bases
ATGCGTTTTATTCCATTACAAACAGAACAACAAGTCAGTTGTTGGGCTGCACAACATATCATCAATCGTATCAACGATTT
TAAACCTACCGCCGAGCGTCCTTTTGTATTGGGGTTACCTACTGGTGGCACACCACTAAAAACTTATCAAGAACTGATTC
GACTTTATCAAGCAGGCAAAGTGAGTTTCAAACACGTAGTGACTTTCAATATGGATGAATATGTGGCTTTACCAGAGGAA
CACCCTGAAAGTTACCACAGCTTTATGTATAACAATTTTTTCAATCATATCGATATTTTACCTGAAAATATCAATATTCT
TAACGGCAATACCGATGACCATAATGCAGAATGCCGTCGTTATGAAGAAAAAATTAAATCCTACGGCAAAATTCATCTGT
TTATGGGGGGGGTTGGCGTAGATGGACATATCGCATTTAATGAACCTGCTTCTTCATTAAGTTCTCGCACCCGTATTAAA
ACGCTAACGCAAGATACATTGATTGCAAATTCACGCTTCTTTAATAATGATGTTACTCAAGTGCCGAAATATGCTTTAAC
CATTGGTGTTGGCACATTATTAGATGCAGAAGAAGTGATGATTTTAGCAACAGGACATCAAAAAGCACTGGCAGTGCAAG
CTGCAGTTGAAGGCAGTATTAACCATTTATGGACAGTCAGTGCATTACAAATGCACCGTCATTTCTTGCTTGTTTGTGAT
GAAGCTGCTCAACAAGAGTTAAAAGTGAAAACCGTGAAATATTTTACTGAATTAGAAGGCGCAGTTGCTGGTACGGATTA
TCAGGATAAATAG

Upstream 100 bases:

>100_bases
AAATTGCCGCACTTATAATGATCCTTTGGTGTAGGGTGGGCTAAAGTCCAGCCTACGATATGAATAGGATCATCACGGTC
AATAATAAAGGAAGGCTAAT

Downstream 100 bases:

>100_bases
AGATCTATTCTTCATCTTTATGTAGGGGCGAATTACATTCGCCCTATAATCTCAACAAGAGCTAAAAGTGAAAACCGTGA
AATATTTTACTGAATTAGAA

Product: glucosamine-6-phosphate deaminase

Products: NA

Alternate protein names: GlcN6P deaminase; GNPDA; Glucosamine-6-phosphate isomerase [H]

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRFIPLQTEQQVSCWAAQHIINRINDFKPTAERPFVLGLPTGGTPLKTYQELIRLYQAGKVSFKHVVTFNMDEYVALPEE
HPESYHSFMYNNFFNHIDILPENINILNGNTDDHNAECRRYEEKIKSYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
TLTQDTLIANSRFFNNDVTQVPKYALTIGVGTLLDAEEVMILATGHQKALAVQAAVEGSINHLWTVSALQMHRHFLLVCD
EAAQQELKVKTVKYFTELEGAVAGTDYQDK

Sequences:

>Translated_270_residues
MRFIPLQTEQQVSCWAAQHIINRINDFKPTAERPFVLGLPTGGTPLKTYQELIRLYQAGKVSFKHVVTFNMDEYVALPEE
HPESYHSFMYNNFFNHIDILPENINILNGNTDDHNAECRRYEEKIKSYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
TLTQDTLIANSRFFNNDVTQVPKYALTIGVGTLLDAEEVMILATGHQKALAVQAAVEGSINHLWTVSALQMHRHFLLVCD
EAAQQELKVKTVKYFTELEGAVAGTDYQDK
>Mature_270_residues
MRFIPLQTEQQVSCWAAQHIINRINDFKPTAERPFVLGLPTGGTPLKTYQELIRLYQAGKVSFKHVVTFNMDEYVALPEE
HPESYHSFMYNNFFNHIDILPENINILNGNTDDHNAECRRYEEKIKSYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIK
TLTQDTLIANSRFFNNDVTQVPKYALTIGVGTLLDAEEVMILATGHQKALAVQAAVEGSINHLWTVSALQMHRHFLLVCD
EAAQQELKVKTVKYFTELEGAVAGTDYQDK

Specific function: Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion [H]

COG id: COG0363

COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily [H]

Homologues:

Organism=Homo sapiens, GI13027378, Length=258, Percent_Identity=61.6279069767442, Blast_Score=335, Evalue=2e-92,
Organism=Homo sapiens, GI19923881, Length=258, Percent_Identity=58.9147286821705, Blast_Score=322, Evalue=2e-88,
Organism=Escherichia coli, GI1786893, Length=260, Percent_Identity=74.2307692307692, Blast_Score=424, Evalue=1e-120,
Organism=Escherichia coli, GI1789530, Length=242, Percent_Identity=27.6859504132231, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI48994958, Length=240, Percent_Identity=24.5833333333333, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17554876, Length=258, Percent_Identity=58.5271317829457, Blast_Score=313, Evalue=8e-86,
Organism=Drosophila melanogaster, GI24581960, Length=255, Percent_Identity=60.7843137254902, Blast_Score=343, Evalue=8e-95,
Organism=Drosophila melanogaster, GI19920764, Length=255, Percent_Identity=60.7843137254902, Blast_Score=343, Evalue=8e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006148
- InterPro:   IPR004547
- InterPro:   IPR018321 [H]

Pfam domain/function: PF01182 Glucosamine_iso [H]

EC number: =3.5.99.6 [H]

Molecular weight: Translated: 30501; Mature: 30501

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS01161 GLC_GALNAC_ISOMERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFIPLQTEQQVSCWAAQHIINRINDFKPTAERPFVLGLPTGGTPLKTYQELIRLYQAGK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
VSFKHVVTFNMDEYVALPEEHPESYHSFMYNNFFNHIDILPENINILNGNTDDHNAECRR
CEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHH
YEEKIKSYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIKTLTQDTLIANSRFFNNDVTQ
HHHHHHCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHH
VPKYALTIGVGTLLDAEEVMILATGHQKALAVQAAVEGSINHLWTVSALQMHRHFLLVCD
CCCEEEEECCHHHCCCCCEEEEEECCCHHEEEHHHHCCCCHHEEHHHHHHHHHHEEEEEC
EAAQQELKVKTVKYFTELEGAVAGTDYQDK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRFIPLQTEQQVSCWAAQHIINRINDFKPTAERPFVLGLPTGGTPLKTYQELIRLYQAGK
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
VSFKHVVTFNMDEYVALPEEHPESYHSFMYNNFFNHIDILPENINILNGNTDDHNAECRR
CEEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHH
YEEKIKSYGKIHLFMGGVGVDGHIAFNEPASSLSSRTRIKTLTQDTLIANSRFFNNDVTQ
HHHHHHCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHEECCCCCCCCHHH
VPKYALTIGVGTLLDAEEVMILATGHQKALAVQAAVEGSINHLWTVSALQMHRHFLLVCD
CCCEEEEECCHHHCCCCCEEEEEECCCHHEEEHHHHCCCCHHEEHHHHHHHHHHEEEEEC
EAAQQELKVKTVKYFTELEGAVAGTDYQDK
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA