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The map label for this gene is recN

Identifier: 16272044

GI number: 16272044

Start: 76082

End: 77758

Strand: Reverse

Name: recN

Synonym: HI0070

Alternate gene names: 16272044

Gene position: 77758-76082 (Counterclockwise)

Preceding gene: 16272045

Following gene: 16272035

Centisome position: 4.25

GC content: 37.69

Gene sequence:

>1677_bases
ATGCTTACTCAACTTACTATCAATAATTTTGCGATTGTCCGTCAGCTTGATATTGAATTGGCGAAAGGAATGTCTGTTAT
AACAGGGGAAACTGGTGCTGGAAAATCTATCGCCATTGATGCTTTAGGTTTATGTTTCGGACAAAGAGTAGAAACCTCAA
TGGTGCGTGAAGGGCAAGAGCGTGCGGAAATTTGTGCAACTTTCCAACTAGAATCGCAAAATCCTGCTTATCACTGGTTG
AGTGAGCAAGAATTACAGGATCCAGATAATCCAACTGAATGTATTTTACGTCGCATAATTAATGCAGACGGACGTTCTAA
GGCTTTTATTAATAGTACACCAGTATCCGCTTCTCAATTAAAAGAAATTGCTCAATATCTCGTTCATATTAATGGGCAAC
ACGCTTCTCAATTATTGTTAAAAAATGACTATCAGCTTCAGTTAGTTGATAATTTTGCCGCTCATCCTGAATTACTTGTG
AAAATGCGTGAAGATTATCAGACATGGAAAAATCTTCAAAATCAAGTTAAAACCTTTCAACAAAAAGTGGCGGAAAATGA
AGCACGTAAACAACTTTTACAGTATCAAGTGGATGAGTTAGATGAATTTAACCTTCGACCAAATGAATATTTGGAATTAG
AAGATGAACAACGTCGTTTATCTAGCAGCGAACAGCTAACTCAACTTTCCCAATCAGCCCTACAAATTTTAAGTGAAAAT
GACACCGTAAATATCGATAGTTTGCTTTATCGTGCGACACAATATATTGATGAATTAGCTGAACTTGATCCGCAATATGC
TGAAGTGCAAAATATGTTGAATGATGCGTTGATTCAAGTGCAAGAAGCAACCAGTGAAGTGCAAAATTTATCAAGTAATA
TCGAGCAAGATCCTCAGCTTTTACAGGAAATCGAACAAAGAATTAGTCAGACTTTACAACTTGCTCGTAAACATCAAGTT
AAACCTGAAGATCTTGTAGAACAGCACAAAAAATTAAAAGCAGAATTAACCGCACTTTTAGATTTTTCTGAAAGTGAAGA
GATGTTGATTGAGCAAGAAAAACGAGCATTTGAACAAATGCAAGCAACGGCTACAGCATTAACAGCAAGTCGTCAGCAAT
CTGCAACCCGCTTAGCGCAAAATGTCACACAGTCGATAAAACAACTTGCAATGGAAAACGCTGAATTTTATGTAGAGTTG
AATACGGATTTAGATAAAGTGAGTGCAAATGGTGCGGATAATGTGATTTTCACTTTGCGTAGTAATTTAGGACAACAACC
GCAGCCATTAGCTAAAATTGCCTCTGGTGGTGAGCTTTCTCGTATTTCTTTAGCCATTCAAGTTTTAACTTCTGATCAAT
CGGCTATTCCAACCTTAATTTTCGATGAAGTGGACGTGGGCATTAGCGGAAAAACAGCAAGTGTTGTCGGAAAACTTTTA
CGTCAATTAAGTGAGCGTTGTCAAGTATTATGCGTAACCCACCTGCCACAGGTTGCTTGTCATGGCCATCATCAGTTTAA
TGTGGAAAAATTTACTGTTGATAATAAAACTGAAACAAAAATGACCGCACTTTCACAAGCTGAACGTGTACCTGCGTTGG
CAAGACTCTTGGGCGGAAGTGAAATTACAGAATTAGCTCTAGCCAATGCACAGGAAATGTTAGATTTGGTTCATTAA

Upstream 100 bases:

>100_bases
ATTTTCGATTGAAATAGATTTGACAAAATACTGTAAAAAATCCTTTACTGTAAATTAAGTCAGTTATATCATATTAAATA
TACAGTTAAAGGATTTTGCT

Downstream 100 bases:

>100_bases
AAATAGGATTGAATATTTAGTTTTTGGGAGGTTTCAAGAAGATTTGTGATGAAGGCTATTTTTGAAACGTCCACAAGCCA
TATTTTAGGATACAAATAAC

Product: DNA repair protein

Products: NA

Alternate protein names: Recombination protein N

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICATFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKRAFEQMQATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANAQEMLDLVH

Sequences:

>Translated_558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICATFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKRAFEQMQATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANAQEMLDLVH
>Mature_558_residues
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQERAEICATFQLESQNPAYHWL
SEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLV
KMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLLQEIEQRISQTLQLARKHQV
KPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKRAFEQMQATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANAQEMLDLVH

Specific function: May be involved in recombinational repair of damaged DNA

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=49.0974729241877, Blast_Score=511, Evalue=1e-146,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECN_HAEIN (P44496)

Other databases:

- EMBL:   L42023
- PIR:   H64046
- RefSeq:   NP_438243.1
- ProteinModelPortal:   P44496
- GeneID:   950958
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0070
- NMPDR:   fig|71421.1.peg.69
- TIGR:   HI_0070
- HOGENOM:   HBG632212
- OMA:   GEMSRFL
- ProtClustDB:   CLSK870055
- BioCyc:   HINF71421:HI_0070-MONOMER
- GO:   GO:0005694
- InterPro:   IPR004604
- InterPro:   IPR003395
- TIGRFAMs:   TIGR00634

Pfam domain/function: PF02463 SMC_N

EC number: NA

Molecular weight: Translated: 62634; Mature: 62634

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQE
CCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHH
RAEICATFQLESQNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQL
HHHHHHEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
KEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQ
HHHHHHHHHCCCCHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKRAFEQM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVELNTDLDKVSANGADNVIFTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEEH
SNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
HHCCCCCCHHHHHHCCCCHHHHHHEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHH
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGS
HHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
EITELALANAQEMLDLVH
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRVETSMVREGQE
CCCEEEECCCHHHHHHHHHHHCCCEEEECCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHH
RAEICATFQLESQNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQL
HHHHHHEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCHHHH
KEIAQYLVHINGQHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQ
HHHHHHHHHCCCCHHHHHHHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
QKVAENEARKQLLQYQVDELDEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSEN
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCC
DTVNIDSLLYRATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLIEQEKRAFEQM
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
QATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVELNTDLDKVSANGADNVIFTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHCCCCCCCEEEEEH
SNLGQQPQPLAKIASGGELSRISLAIQVLTSDQSAIPTLIFDEVDVGISGKTASVVGKLL
HHCCCCCCHHHHHHCCCCHHHHHHEEEEEECCCCCCCHHEECCCCCCCCCCHHHHHHHHH
RQLSERCQVLCVTHLPQVACHGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGS
HHHHHHHHHHHHHHCCHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
EITELALANAQEMLDLVH
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800