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The map label for this gene is ygdQ [C]

Identifier: 16272030

GI number: 16272030

Start: 56844

End: 57557

Strand: Reverse

Name: ygdQ [C]

Synonym: HI0056

Alternate gene names: 16272030

Gene position: 57557-56844 (Counterclockwise)

Preceding gene: 16272031

Following gene: 16272027

Centisome position: 3.14

GC content: 37.68

Gene sequence:

>714_bases
ATGTTTGAATGGATTGCAGATCCTGAAGCGTGGATATCACTTGTGACACTTGCGGCTTTAGAGATCGTTTTAGGAATCGA
CAATATTATTTTTATTAACATCCTAGTTGGACGTTTACCTGAACGCCAACGCCAGTCTGGTCGTATTCTTGGGCTTGCTT
TGGCAATGCTAACAAGAATTTTACTTTTAATGTCACTAGCGTGGATAATGAAACTTACTGCACCGTTATTTACTGTGTTT
AATCAAGAAATTTCTGGGCGTGATTTGATTTTATTAATCGGTGGTTTATTCCTGATTATAAAAAGTTCTGGCGAAATTAA
AGAGGCGATAAATCATCAAGAACACCATGAATCTGAAAGCAAAAACAAAGTGAGTTATCTTGGCGTATTAATTCAAATTG
CTGTGCTAGATATTGTATTTTCTTTAGATTCTGTCATTACAGCGGTGGGTATGGCAAGCCACCTTCCTGTGATGATTTTG
GCGATTATGATTGCCGTGGGGGTGATGATGTTTGCGGCAAAACCAATCGGCGATTTTGTGGATACACACCCAACGTTGAA
AATTCTAGCTTTAGCTTTCTTGGTTTTAGTCGGAATTAGTTTAATTGCAGAAAGTTTGGATATTCACATCCCGAAAGGTT
ACATCTATTTTGCAATGGGATTCTCTGTTGTGGTCGAGATGATCAATATTCGAATGAGAAGATTGATGAAATAA

Upstream 100 bases:

>100_bases
TAATCAATCATTTCTCAAATATAAATAACGATTGCTTTTCGTCATAAAGCCATTATGATCTGTATTTTCGGATTTATTTA
ACTCAATTATAGGAAAAATT

Downstream 100 bases:

>100_bases
ATTAGAAGTGCGGTCGATAAAAATAATGTTTTTTATGACCGCACTTTTTCTTTTACTTATTGAAATACACTTTTTTTAAT
GCCATCTCTAAACCGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRILLLMSLAWIMKLTAPLFTVF
NQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESESKNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIMIAVGVMMFAAKPIGDFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK

Sequences:

>Translated_237_residues
MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRILLLMSLAWIMKLTAPLFTVF
NQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESESKNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIMIAVGVMMFAAKPIGDFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
>Mature_237_residues
MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRILLLMSLAWIMKLTAPLFTVF
NQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESESKNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMIL
AIMIAVGVMMFAAKPIGDFVDTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK

Specific function: Unknown

COG id: COG0861

COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0053 family

Homologues:

Organism=Escherichia coli, GI1789197, Length=235, Percent_Identity=60.8510638297872, Blast_Score=262, Evalue=2e-71,
Organism=Escherichia coli, GI1788119, Length=232, Percent_Identity=50.4310344827586, Blast_Score=246, Evalue=1e-66,
Organism=Escherichia coli, GI87082033, Length=227, Percent_Identity=50.2202643171806, Blast_Score=221, Evalue=5e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y056_HAEIN (P43932)

Other databases:

- EMBL:   L42023
- PIR:   D64000
- RefSeq:   NP_438229.1
- GeneID:   950954
- GenomeReviews:   L42023_GR
- KEGG:   hin:HI0056
- NMPDR:   fig|71421.1.peg.55
- TIGR:   HI_0056
- HOGENOM:   HBG470183
- OMA:   RTAMARK
- ProtClustDB:   CLSK789648
- BioCyc:   HINF71421:HI_0056-MONOMER
- InterPro:   IPR005496

Pfam domain/function: PF03741 TerC

EC number: NA

Molecular weight: Translated: 26231; Mature: 26231

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb1a6230)-; HASH(0xb6c1ec4)-; HASH(0xb5d50c0)-; HASH(0xb6bfb2c)-; HASH(0xb6d3fd4)-; HASH(0x4059bb14)-; HASH(0xb5be074)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHH
LLLMSLAWIMKLTAPLFTVFNQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESES
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHH
KNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIMIAVGVMMFAAKPIGDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
DTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MFEWIADPEAWISLVTLAALEIVLGIDNIIFINILVGRLPERQRQSGRILGLALAMLTRI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHH
LLLMSLAWIMKLTAPLFTVFNQEISGRDLILLIGGLFLIIKSSGEIKEAINHQEHHESES
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHHH
KNKVSYLGVLIQIAVLDIVFSLDSVITAVGMASHLPVMILAIMIAVGVMMFAAKPIGDFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
DTHPTLKILALAFLVLVGISLIAESLDIHIPKGYIYFAMGFSVVVEMINIRMRRLMK
CCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800