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The map label for this gene is hsdS1 [C]

Identifier: 162447451

GI number: 162447451

Start: 622900

End: 624159

Strand: Direct

Name: hsdS1 [C]

Synonym: ACL_0590

Alternate gene names: 162447451

Gene position: 622900-624159 (Clockwise)

Preceding gene: 162447450

Following gene: 162447452

Centisome position: 41.61

GC content: 33.41

Gene sequence:

>1260_bases
ATGAGCTTTGATCAATGGAGTAAAGTCAATTTGGTGGATTGTCTCGACAAATTGATTGATTATAGAGGTAAAACACCAGC
AAAATCAGAAAAAGGGATATTAACGTTAAGTGCAAAATCAGTTAAAAACAGTAACATAGATTACAGTGAGGCATACACTA
TTTCAGAAGATGAATATAAAAAGTTTATGGTTAGAGGAATTCCCGTCAAAGGGGATATTCTAATAACAACTGAAGCACCA
ATGGGACAGGTTGCAAAACTAGATAGAGATGGAGTAGCAGTTGCACAAAGATTGTTGACATTAAGACCAAATCCCAAGAT
TCTAGACAATGATTATTTGTTATATTATTTGCAATCACCTATAGGACAAGCAGAACTTAAGGCTAGAGAAAGTGGGTCAA
CAGTAACTGGTATTAAGCAGGCAGAGTTTAGAAAGATTAACATTATTCTTCCTCCACTTAGTGAACAAAAAGTAATAGCA
AACATCCTCTCATCTCTTGATGACAAAATAGAACTCAACAACAAAATCAATAAAAACCTTGAAGAATTAGCACAAACACT
CTACAAGAGATGGTTTGTGGATTTTGATTTTCCTAATGAAGAGGGAGAATCCTACAAATCCAGCGGTGGGGAAATGGTTG
AAAGTGAATTAGGATTGATTCCTAAAGGATGGAAAGTGGAATCAATTGGACGAAGCTCAATCTCAAAACTTATTAGTTCA
GGTATTAATGAATTTAATGGGACAAAAAAATATATTGCAACAGCGGATGTTACAAACCTTTCAATAAGATCATTCGTTAC
TGAGATAGATTTCAAGAAGCGACCATCTAGAGCTAACATGCAGCCCATAGCTGGGAGTCTATGGTTTGCAAAAATGAAGG
ATTCAAGAAAAATGATTAGAGTATCTAAGAGTAGTAGTTATCTAATCGATAAGTGTATTTTCTCAACGGGTTTCGCAGGA
TTATTCGCTCCGAAATATTCAAATTACATTTGGACAATTTTAACTACTAAAGATTTTGATGATACAAAAAATAATCTATG
CAATGGAACAACAATGCAAGCAATAAATAATGAGAATATTAATAGGATCAGAATTCTAATTCCTGATAACAAAACACTTG
ACTTATTTGAAAGTGTATCAGAACCTATTTTTGAGAAAATACAGTTTAATGAAATCGAAAGTAATAAATTGTCAAAGATT
CGTGATGAATTACTACCCAAACTAATGAATGGTGAAATCGAAGTACCAATTGAGGAGTGA

Upstream 100 bases:

>100_bases
GAAGAAAAGATGGAAAAACTGACTTTAGAATTATCTGAGTTATTTGAAGAATCTAAATCTCTTGAGGAAAAGATCAAAGA
GAACTTAAGAGGTATCGGGT

Downstream 100 bases:

>100_bases
TGTTATGGCTGTTAAAGTATTCTTTGAATCTGATGTAGAAGAAGCTACATTAGAATGGTTTCAGGAACTAGGATATCAAA
CTGAGTTTGGTCCTAATATT

Product: type I site-specific restriction-modification system, S (specificity) subunit

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSFDQWSKVNLVDCLDKLIDYRGKTPAKSEKGILTLSAKSVKNSNIDYSEAYTISEDEYKKFMVRGIPVKGDILITTEAP
MGQVAKLDRDGVAVAQRLLTLRPNPKILDNDYLLYYLQSPIGQAELKARESGSTVTGIKQAEFRKINIILPPLSEQKVIA
NILSSLDDKIELNNKINKNLEELAQTLYKRWFVDFDFPNEEGESYKSSGGEMVESELGLIPKGWKVESIGRSSISKLISS
GINEFNGTKKYIATADVTNLSIRSFVTEIDFKKRPSRANMQPIAGSLWFAKMKDSRKMIRVSKSSSYLIDKCIFSTGFAG
LFAPKYSNYIWTILTTKDFDDTKNNLCNGTTMQAINNENINRIRILIPDNKTLDLFESVSEPIFEKIQFNEIESNKLSKI
RDELLPKLMNGEIEVPIEE

Sequences:

>Translated_419_residues
MSFDQWSKVNLVDCLDKLIDYRGKTPAKSEKGILTLSAKSVKNSNIDYSEAYTISEDEYKKFMVRGIPVKGDILITTEAP
MGQVAKLDRDGVAVAQRLLTLRPNPKILDNDYLLYYLQSPIGQAELKARESGSTVTGIKQAEFRKINIILPPLSEQKVIA
NILSSLDDKIELNNKINKNLEELAQTLYKRWFVDFDFPNEEGESYKSSGGEMVESELGLIPKGWKVESIGRSSISKLISS
GINEFNGTKKYIATADVTNLSIRSFVTEIDFKKRPSRANMQPIAGSLWFAKMKDSRKMIRVSKSSSYLIDKCIFSTGFAG
LFAPKYSNYIWTILTTKDFDDTKNNLCNGTTMQAINNENINRIRILIPDNKTLDLFESVSEPIFEKIQFNEIESNKLSKI
RDELLPKLMNGEIEVPIEE
>Mature_418_residues
SFDQWSKVNLVDCLDKLIDYRGKTPAKSEKGILTLSAKSVKNSNIDYSEAYTISEDEYKKFMVRGIPVKGDILITTEAPM
GQVAKLDRDGVAVAQRLLTLRPNPKILDNDYLLYYLQSPIGQAELKARESGSTVTGIKQAEFRKINIILPPLSEQKVIAN
ILSSLDDKIELNNKINKNLEELAQTLYKRWFVDFDFPNEEGESYKSSGGEMVESELGLIPKGWKVESIGRSSISKLISSG
INEFNGTKKYIATADVTNLSIRSFVTEIDFKKRPSRANMQPIAGSLWFAKMKDSRKMIRVSKSSSYLIDKCIFSTGFAGL
FAPKYSNYIWTILTTKDFDDTKNNLCNGTTMQAINNENINRIRILIPDNKTLDLFESVSEPIFEKIQFNEIESNKLSKIR
DELLPKLMNGEIEVPIEE

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 47384; Mature: 47253

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDQWSKVNLVDCLDKLIDYRGKTPAKSEKGILTLSAKSVKNSNIDYSEAYTISEDEYK
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEECCHHHHH
KFMVRGIPVKGDILITTEAPMGQVAKLDRDGVAVAQRLLTLRPNPKILDNDYLLYYLQSP
HHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCEECCCEEEEEECCC
IGQAELKARESGSTVTGIKQAEFRKINIILPPLSEQKVIANILSSLDDKIELNNKINKNL
CCHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCHHCCCH
EELAQTLYKRWFVDFDFPNEEGESYKSSGGEMVESELGLIPKGWKVESIGRSSISKLISS
HHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHHHHCCCCCCCCEEHHCCHHHHHHHHHH
GINEFNGTKKYIATADVTNLSIRSFVTEIDFKKRPSRANMQPIAGSLWFAKMKDSRKMIR
HHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
VSKSSSYLIDKCIFSTGFAGLFAPKYSNYIWTILTTKDFDDTKNNLCNGTTMQAINNENI
EECCCCHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEECCCCC
NRIRILIPDNKTLDLFESVSEPIFEKIQFNEIESNKLSKIRDELLPKLMNGEIEVPIEE
CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCC
>Mature Secondary Structure 
SFDQWSKVNLVDCLDKLIDYRGKTPAKSEKGILTLSAKSVKNSNIDYSEAYTISEDEYK
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHEEECCHHHHH
KFMVRGIPVKGDILITTEAPMGQVAKLDRDGVAVAQRLLTLRPNPKILDNDYLLYYLQSP
HHHHHCCCCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHCCCCCCEECCCEEEEEECCC
IGQAELKARESGSTVTGIKQAEFRKINIILPPLSEQKVIANILSSLDDKIELNNKINKNL
CCHHHHHHHCCCCEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCEECCCHHCCCH
EELAQTLYKRWFVDFDFPNEEGESYKSSGGEMVESELGLIPKGWKVESIGRSSISKLISS
HHHHHHHHHHHEEECCCCCCCCCHHHHCCCHHHHHHCCCCCCCCEEHHCCHHHHHHHHHH
GINEFNGTKKYIATADVTNLSIRSFVTEIDFKKRPSRANMQPIAGSLWFAKMKDSRKMIR
HHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEE
VSKSSSYLIDKCIFSTGFAGLFAPKYSNYIWTILTTKDFDDTKNNLCNGTTMQAINNENI
EECCCCHHHHHHHHHCCCHHHCCCCCCCEEEEEEEECCCCCHHHCCCCCCEEEEECCCCC
NRIRILIPDNKTLDLFESVSEPIFEKIQFNEIESNKLSKIRDELLPKLMNGEIEVPIEE
CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]