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The map label for this gene is yqfA [H]

Identifier: 162447357

GI number: 162447357

Start: 518190

End: 518867

Strand: Direct

Name: yqfA [H]

Synonym: ACL_0495

Alternate gene names: 162447357

Gene position: 518190-518867 (Clockwise)

Preceding gene: 162447356

Following gene: 162447358

Centisome position: 34.62

GC content: 31.42

Gene sequence:

>678_bases
ATGAGTAAAAAAGTAAAAAAAGAAAAAAGAATTCAAACAATTGGTGAAGAAGTAGCAAATAGTGTATCACATGGTCTGAT
GACAGTATTTGGTATCGTCGGTTTAATTATGATGCTTATCAAATCCACGGATGGATTTGAAGTAGCGAGTGCCATCATAT
TTGGACTTTCAATGATTATACTATACTTAAGTTCAACCATGTATCACGCGCTTGCATTTACAGGTGCTAAATCAGTATTT
AAAAGATTTGATCACATTGGTATTTACATGCTAATAGGTGGTACGTTTGCACCCATATTCTTATTGTTACCAGCTTTTAG
AGTACCTATATTTGGTATGGAAGGTTGGTTACCTTTAGGTTTATTACTTTGTATACTACAATGGGTTTTAATTATTACAG
GTATGGTATTTAAATCCATTTGGGTTTACAGATTTCAAACCATGCATATTGTCATATTCTTATTACTTGGCTGGAGCGGT
TTATACTTTATGATTGACCTTTATAAATATAGTCCATCAACTATGTGGCTGATTTTATTAGGTGGTCTTAGTTATTCGAT
TGGTGTTATATTTTATAAACAATCAGATAAACCGTATTTTCACTTCATCTGGCACTTGTTTGTAGGTTTGGGTACAATCC
TACAATTTATGGCAATTTATAATTATTTAATAATTTAA

Upstream 100 bases:

>100_bases
GAAGTATTAAGACAGTTAGGTTATCCTGAGTTAAGTGAAGAAGAACCGGAAAGTCTAAAAGGATCAGACTATTTAAAACA
ATTTAAGGAGTAATTAGAGG

Downstream 100 bases:

>100_bases
AAACTAAAATTATGTTAATACTTGAATATTTATTCATGTTGAGTTAAAATCAAATAAGATAGGAAGGTAATATTATGAAA
ATTTTATCGGTTAACGCTGG

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSKKVKKEKRIQTIGEEVANSVSHGLMTVFGIVGLIMMLIKSTDGFEVASAIIFGLSMIILYLSSTMYHALAFTGAKSVF
KRFDHIGIYMLIGGTFAPIFLLLPAFRVPIFGMEGWLPLGLLLCILQWVLIITGMVFKSIWVYRFQTMHIVIFLLLGWSG
LYFMIDLYKYSPSTMWLILLGGLSYSIGVIFYKQSDKPYFHFIWHLFVGLGTILQFMAIYNYLII

Sequences:

>Translated_225_residues
MSKKVKKEKRIQTIGEEVANSVSHGLMTVFGIVGLIMMLIKSTDGFEVASAIIFGLSMIILYLSSTMYHALAFTGAKSVF
KRFDHIGIYMLIGGTFAPIFLLLPAFRVPIFGMEGWLPLGLLLCILQWVLIITGMVFKSIWVYRFQTMHIVIFLLLGWSG
LYFMIDLYKYSPSTMWLILLGGLSYSIGVIFYKQSDKPYFHFIWHLFVGLGTILQFMAIYNYLII
>Mature_224_residues
SKKVKKEKRIQTIGEEVANSVSHGLMTVFGIVGLIMMLIKSTDGFEVASAIIFGLSMIILYLSSTMYHALAFTGAKSVFK
RFDHIGIYMLIGGTFAPIFLLLPAFRVPIFGMEGWLPLGLLLCILQWVLIITGMVFKSIWVYRFQTMHIVIFLLLGWSGL
YFMIDLYKYSPSTMWLILLGGLSYSIGVIFYKQSDKPYFHFIWHLFVGLGTILQFMAIYNYLII

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Homo sapiens, GI154759275, Length=232, Percent_Identity=25.4310344827586, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI52630445, Length=231, Percent_Identity=24.6753246753247, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1789266, Length=220, Percent_Identity=40.4545454545455, Blast_Score=151, Evalue=3e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 25662; Mature: 25530

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKVKKEKRIQTIGEEVANSVSHGLMTVFGIVGLIMMLIKSTDGFEVASAIIFGLSMII
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYLSSTMYHALAFTGAKSVFKRFDHIGIYMLIGGTFAPIFLLLPAFRVPIFGMEGWLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHCCCCCCCCCHHHH
LLLCILQWVLIITGMVFKSIWVYRFQTMHIVIFLLLGWSGLYFMIDLYKYSPSTMWLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GGLSYSIGVIFYKQSDKPYFHFIWHLFVGLGTILQFMAIYNYLII
HCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKVKKEKRIQTIGEEVANSVSHGLMTVFGIVGLIMMLIKSTDGFEVASAIIFGLSMII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LYLSSTMYHALAFTGAKSVFKRFDHIGIYMLIGGTFAPIFLLLPAFRVPIFGMEGWLPLG
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEECHHHHHHHHHHHHHHCCCCCCCCCHHHH
LLLCILQWVLIITGMVFKSIWVYRFQTMHIVIFLLLGWSGLYFMIDLYKYSPSTMWLILL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GGLSYSIGVIFYKQSDKPYFHFIWHLFVGLGTILQFMAIYNYLII
HCHHHEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]