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The map label for this gene is ybbC [H]

Identifier: 162447147

GI number: 162447147

Start: 290876

End: 292015

Strand: Direct

Name: ybbC [H]

Synonym: ACL_0279

Alternate gene names: 162447147

Gene position: 290876-292015 (Clockwise)

Preceding gene: 162447146

Following gene: 162447148

Centisome position: 19.43

GC content: 32.19

Gene sequence:

>1140_bases
ATGTTTAAATTAGGTATAGATCGTATTGATGAATTTCTACATTTATTTGAAAATAAACGTGTGGGTTTAATTACAAACCC
AACAGGGGTTAACTCTAAATTAGAGTTAACAGCGGATATATTAAATCGTAAAGTAAACTTAACGACACTCTTTGGTCCTG
AACACGGTATACGTGGAGATGCAGAGGCTGGTGTTAAAGTAGAAAGTTATTTTGATAAAAAATTAAATATTGAAGTACAC
TCACTTTATGGACAAAATAGAAGACCGAATCAAGAAATGTTAAAAGATGTTGATGTATTAGTCTTTGATATGCAAGATGT
AGGTGCTAGATTTTATACATACATCTACACGATGAGTCATGCGATGCAAGCTGCAAAGGAAAATAATATTCCATTTGTAG
TGTTTGACAGACCTAACCCAGTAGGACACAAGTTAGAAGGTAATATACTTGATTTAACTTATCGTTCTTTTGTTGGATAT
TATCCAATACTACAAAGATATGGTATGACTATTGGAGAACTAGCTTTATACTTTAATACCGAGCAAGGTATTGGCTGTGA
TTTAACAGTAGTACCAATGCAAGGCTATTCATATGATAAAGATTATACAGAATATGATATACCTTGGTTAGCACCAAGTC
CAAATATTCCAACACTAGATAGTGCTCACATTTATTTAGCAACATGTGTATTTGAAGGTACTAATGTTAGTGAAGGTCGT
GGCACTACAAGGCCATTTAGTATGATTGGTGCACCGTTTATCGATGCAGATGATTTAGCCGCTAAAGTGGCTAAATTAAA
TACACCAGGTATCTTAGTTAGACCAGTTCATTTTATTCCGAACATGAGTAAACATGAAGGTGTAAATTGCTCTGGTATCG
AAATATTTTTAAGAGATAAAAACGTATTTGAACCTGTTAAATTTGGTTATAAACTACTAGATATCATTCGTAAAGATTAT
AAAGAATTTGAATTTAGAGTGCCTTGGAGTGAAGGCGGTAAGCAAATGATTGATTTATTAACTGGTGATAATAAGTTAAA
AACAAATGTTGATTTAGACCTCATTTTTGATGGGTTTAAACAGGATGAAAAAACTTTTGAGCAATCAATTAGGAGGTTTA
AATTATATGAAAAAATTTGA

Upstream 100 bases:

>100_bases
ACATTAATCTTAGTGTTTATTGGAATGTCTACCATGGTATTACTATATGCACTTATCTTTAGCAAAGTTGTAACATATGT
CGAAGGATTGGATGGAGAAA

Downstream 100 bases:

>100_bases
CATTAATAAATTAACAACCCAAGAAAAAATTGGACAATTAATCGTTGCAGGCTTCCATGGTACAACTGTTGGACCAGAAA
TTGAAAATTTAATTAGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MFKLGIDRIDEFLHLFENKRVGLITNPTGVNSKLELTADILNRKVNLTTLFGPEHGIRGDAEAGVKVESYFDKKLNIEVH
SLYGQNRRPNQEMLKDVDVLVFDMQDVGARFYTYIYTMSHAMQAAKENNIPFVVFDRPNPVGHKLEGNILDLTYRSFVGY
YPILQRYGMTIGELALYFNTEQGIGCDLTVVPMQGYSYDKDYTEYDIPWLAPSPNIPTLDSAHIYLATCVFEGTNVSEGR
GTTRPFSMIGAPFIDADDLAAKVAKLNTPGILVRPVHFIPNMSKHEGVNCSGIEIFLRDKNVFEPVKFGYKLLDIIRKDY
KEFEFRVPWSEGGKQMIDLLTGDNKLKTNVDLDLIFDGFKQDEKTFEQSIRRFKLYEKI

Sequences:

>Translated_379_residues
MFKLGIDRIDEFLHLFENKRVGLITNPTGVNSKLELTADILNRKVNLTTLFGPEHGIRGDAEAGVKVESYFDKKLNIEVH
SLYGQNRRPNQEMLKDVDVLVFDMQDVGARFYTYIYTMSHAMQAAKENNIPFVVFDRPNPVGHKLEGNILDLTYRSFVGY
YPILQRYGMTIGELALYFNTEQGIGCDLTVVPMQGYSYDKDYTEYDIPWLAPSPNIPTLDSAHIYLATCVFEGTNVSEGR
GTTRPFSMIGAPFIDADDLAAKVAKLNTPGILVRPVHFIPNMSKHEGVNCSGIEIFLRDKNVFEPVKFGYKLLDIIRKDY
KEFEFRVPWSEGGKQMIDLLTGDNKLKTNVDLDLIFDGFKQDEKTFEQSIRRFKLYEKI
>Mature_379_residues
MFKLGIDRIDEFLHLFENKRVGLITNPTGVNSKLELTADILNRKVNLTTLFGPEHGIRGDAEAGVKVESYFDKKLNIEVH
SLYGQNRRPNQEMLKDVDVLVFDMQDVGARFYTYIYTMSHAMQAAKENNIPFVVFDRPNPVGHKLEGNILDLTYRSFVGY
YPILQRYGMTIGELALYFNTEQGIGCDLTVVPMQGYSYDKDYTEYDIPWLAPSPNIPTLDSAHIYLATCVFEGTNVSEGR
GTTRPFSMIGAPFIDADDLAAKVAKLNTPGILVRPVHFIPNMSKHEGVNCSGIEIFLRDKNVFEPVKFGYKLLDIIRKDY
KEFEFRVPWSEGGKQMIDLLTGDNKLKTNVDLDLIFDGFKQDEKTFEQSIRRFKLYEKI

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 43294; Mature: 43294

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKLGIDRIDEFLHLFENKRVGLITNPTGVNSKLELTADILNRKVNLTTLFGPEHGIRGD
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHCCEEEEEEEECCCCCCCCC
AEAGVKVESYFDKKLNIEVHSLYGQNRRPNQEMLKDVDVLVFDMQDVGARFYTYIYTMSH
CCCCEEEHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEECHHHHHHHHHHHHHHHHH
AMQAAKENNIPFVVFDRPNPVGHKLEGNILDLTYRSFVGYYPILQRYGMTIGELALYFNT
HHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHEEEEEEC
EQGIGCDLTVVPMQGYSYDKDYTEYDIPWLAPSPNIPTLDSAHIYLATCVFEGTNVSEGR
CCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCCCCCC
GTTRPFSMIGAPFIDADDLAAKVAKLNTPGILVRPVHFIPNMSKHEGVNCSGIEIFLRDK
CCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHCCCCCCCEEEEEECC
NVFEPVKFGYKLLDIIRKDYKEFEFRVPWSEGGKQMIDLLTGDNKLKTNVDLDLIFDGFK
CCCCHHHHHHHHHHHHHHHHHHCEEECCHHHCCHHHHHHHCCCCCEEECCCEEEEECCCC
QDEKTFEQSIRRFKLYEKI
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFKLGIDRIDEFLHLFENKRVGLITNPTGVNSKLELTADILNRKVNLTTLFGPEHGIRGD
CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEHHHHCCEEEEEEEECCCCCCCCC
AEAGVKVESYFDKKLNIEVHSLYGQNRRPNQEMLKDVDVLVFDMQDVGARFYTYIYTMSH
CCCCEEEHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEECHHHHHHHHHHHHHHHHH
AMQAAKENNIPFVVFDRPNPVGHKLEGNILDLTYRSFVGYYPILQRYGMTIGELALYFNT
HHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHEEEEEEC
EQGIGCDLTVVPMQGYSYDKDYTEYDIPWLAPSPNIPTLDSAHIYLATCVFEGTNVSEGR
CCCCCCCEEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEECCCCCCCCC
GTTRPFSMIGAPFIDADDLAAKVAKLNTPGILVRPVHFIPNMSKHEGVNCSGIEIFLRDK
CCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEEHHHCCCCCHHCCCCCCCEEEEEECC
NVFEPVKFGYKLLDIIRKDYKEFEFRVPWSEGGKQMIDLLTGDNKLKTNVDLDLIFDGFK
CCCCHHHHHHHHHHHHHHHHHHCEEECCHHHCCHHHHHHHCCCCCEEECCCEEEEECCCC
QDEKTFEQSIRRFKLYEKI
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]