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The map label for this gene is yhaM [H]

Identifier: 162447079

GI number: 162447079

Start: 199990

End: 200895

Strand: Direct

Name: yhaM [H]

Synonym: ACL_0209

Alternate gene names: 162447079

Gene position: 199990-200895 (Clockwise)

Preceding gene: 162447078

Following gene: 162447081

Centisome position: 13.36

GC content: 31.24

Gene sequence:

>906_bases
ATGGACATAATTATTGGTAAAGTAGAATCTATTAATAAAGGTGACAACTATTGTAATGCATCTTTATCCTTAGAAGATAA
AAAACATTTCAATGTGAAATTAAATATGGAAGATGATCAATTACTTGCTATAGGTAAAGTATTTGTCTTTGAAGTAGAAG
CTTTTTACAAAGAAGAAGTTAAACAATTTAAAGCACTCAAGATAACACCTTTAGAAGTTTCAGATGTTCCTAAACAAGAT
AAAAATAGACTGTATTCATTATTCTATGATTATGCACCAATTCCTTTAAAAGATATTCGTCTAGGTATTGAATCCTTCTT
AAATAGAATAGAAAATAAGATTCTAAAAGATGTAACAACACTTGTATATGAAAAACATGAAGGTCAATATTACTTGCATC
CTGCAGCGACTAAATTTCACCATGCCTATGTAGGTGGCTTAGCTTATCATACATTTACCATGTTAAAATTAGTCGATGCG
ATGTTAAGTGTATATGACTATTTGGATAAAGACTTACTCTATGCAGCTACGATACTACATGACATTTCAAAAATTGATGA
AATGACGGGTGTAGATGGCGAGTATACAACAGAAGGCTTACTCATTGGTCACTTAGTGATGGCAAGCATTGAAGTTGAAA
AAGCTGCAACCATATTAGGTGTAGAAGATAGTGAAGAAGTACTTTTATTAAAACACTTAATCGTTTCACATCATGGACAA
CTAAATTTCGGTTCTCCAAAAAAACCTCAAACTGGGGAAGCATTGCTTCTTTGGTATATTGATTCCATTGACTCTAAGTT
TACAGAATTAAAAACAGCCTTAGAATCTACTAAAGCTGGTGAGTTTACTCAAAGTGTTGCAGTACTAGATAAGATGCGTT
TCTATAAATCAAAACTTAAAAAATAA

Upstream 100 bases:

>100_bases
TAAATTAAAAGCACACATGATTGATCATATTCTAGAAAAGAAACTGTCTAACAATAAAGAAGCATTAACAAGTTTTGTTA
GTACATATGAGGTGTAACAG

Downstream 100 bases:

>100_bases
CGAATTATCCTTAGGTCCTAGACTTAGGGATTTTTTTTATGTAGATATATATAGAAAAATGCGACTATTTCTAGTCGCAT
TTAAACTTGTATATTTATGA

Product: metal-dependent phosphohydrolase, HD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MDIIIGKVESINKGDNYCNASLSLEDKKHFNVKLNMEDDQLLAIGKVFVFEVEAFYKEEVKQFKALKITPLEVSDVPKQD
KNRLYSLFYDYAPIPLKDIRLGIESFLNRIENKILKDVTTLVYEKHEGQYYLHPAATKFHHAYVGGLAYHTFTMLKLVDA
MLSVYDYLDKDLLYAATILHDISKIDEMTGVDGEYTTEGLLIGHLVMASIEVEKAATILGVEDSEEVLLLKHLIVSHHGQ
LNFGSPKKPQTGEALLLWYIDSIDSKFTELKTALESTKAGEFTQSVAVLDKMRFYKSKLKK

Sequences:

>Translated_301_residues
MDIIIGKVESINKGDNYCNASLSLEDKKHFNVKLNMEDDQLLAIGKVFVFEVEAFYKEEVKQFKALKITPLEVSDVPKQD
KNRLYSLFYDYAPIPLKDIRLGIESFLNRIENKILKDVTTLVYEKHEGQYYLHPAATKFHHAYVGGLAYHTFTMLKLVDA
MLSVYDYLDKDLLYAATILHDISKIDEMTGVDGEYTTEGLLIGHLVMASIEVEKAATILGVEDSEEVLLLKHLIVSHHGQ
LNFGSPKKPQTGEALLLWYIDSIDSKFTELKTALESTKAGEFTQSVAVLDKMRFYKSKLKK
>Mature_301_residues
MDIIIGKVESINKGDNYCNASLSLEDKKHFNVKLNMEDDQLLAIGKVFVFEVEAFYKEEVKQFKALKITPLEVSDVPKQD
KNRLYSLFYDYAPIPLKDIRLGIESFLNRIENKILKDVTTLVYEKHEGQYYLHPAATKFHHAYVGGLAYHTFTMLKLVDA
MLSVYDYLDKDLLYAATILHDISKIDEMTGVDGEYTTEGLLIGHLVMASIEVEKAATILGVEDSEEVLLLKHLIVSHHGQ
LNFGSPKKPQTGEALLLWYIDSIDSKFTELKTALESTKAGEFTQSVAVLDKMRFYKSKLKK

Specific function: Shows a 3'-5' exoribonuclease activity [H]

COG id: COG3481

COG function: function code R; Predicted HD-superfamily hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020873
- InterPro:   IPR003607
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004365 [H]

Pfam domain/function: PF01336 tRNA_anti [H]

EC number: NA

Molecular weight: Translated: 34224; Mature: 34224

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIIGKVESINKGDNYCNASLSLEDKKHFNVKLNMEDDQLLAIGKVFVFEVEAFYKEEV
CCEEECCCCCCCCCCCCEECEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
KQFKALKITPLEVSDVPKQDKNRLYSLFYDYAPIPLKDIRLGIESFLNRIENKILKDVTT
HHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVYEKHEGQYYLHPAATKFHHAYVGGLAYHTFTMLKLVDAMLSVYDYLDKDLLYAATILH
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DISKIDEMTGVDGEYTTEGLLIGHLVMASIEVEKAATILGVEDSEEVLLLKHLIVSHHGQ
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCC
LNFGSPKKPQTGEALLLWYIDSIDSKFTELKTALESTKAGEFTQSVAVLDKMRFYKSKLK
CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MDIIIGKVESINKGDNYCNASLSLEDKKHFNVKLNMEDDQLLAIGKVFVFEVEAFYKEEV
CCEEECCCCCCCCCCCCEECEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
KQFKALKITPLEVSDVPKQDKNRLYSLFYDYAPIPLKDIRLGIESFLNRIENKILKDVTT
HHHHHEEECCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVYEKHEGQYYLHPAATKFHHAYVGGLAYHTFTMLKLVDAMLSVYDYLDKDLLYAATILH
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DISKIDEMTGVDGEYTTEGLLIGHLVMASIEVEKAATILGVEDSEEVLLLKHLIVSHHGQ
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHCCCC
LNFGSPKKPQTGEALLLWYIDSIDSKFTELKTALESTKAGEFTQSVAVLDKMRFYKSKLK
CCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA