| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is sstT [H]
Identifier: 162420904
GI number: 162420904
Start: 1136271
End: 1137476
Strand: Direct
Name: sstT [H]
Synonym: YpAngola_A1099
Alternate gene names: 162420904
Gene position: 1136271-1137476 (Clockwise)
Preceding gene: 162421305
Following gene: 162420484
Centisome position: 25.23
GC content: 49.25
Gene sequence:
>1206_bases GTGAAACAAATACTGATCGGTTTAGTTGCCGGTATTGTTTTAGCATTAGTATCGACTCCTGCAGCGATAGCGGTAGGGTT ACTCGGTTCGCTGTTCGTGGGCGCATTAAAAGCCGTCGCGCCAGTTTTAGTCTTGATGTTGGTCATAGCATCCATCGCCA ACCATAAGAAAGGCCAAAAAACCAGTATTCGCCCTATTCTGTTCCTGTATGTATTAGGGACATTCTCTGCGGCACTGGTT GCGGTTGTCGTCAGTTTTATCTACCCATCAACCCTTATTTTGGTGGCTGAGAGTGCTGATATCACCCCACCGAGTGGGAT TGTTGAAGTGCTACACGGTTTGCTAAACAGCATAATCGCCAACCCTATCCATGCGCTGCTCAATGCTAACTACATTGGTA TTCTGGCTTGGGCTGTGGGTTTAGGTATTGCCTTGCGTCATGCTGCCGATACCACCAAAGCATTGATTAATGATATGTCA GATGCCGTCACTTTGGTGGTCCGTGTGGTTATCCGTTTTGCACCGTTGGGTATTTTTGGTTTGGTCGCGTCCACTATCGC AGCTACCGGCTTCGGTGCCTTACAGCTTTATGCGCAACTGTTAGTGGTATTGATCGGCTGTATGTTACTGGTGGCATTAG TGGTCAACCCACTGATTGTTTACTGGAAGATTCGCCGTAATCCTTATCCATTGGTATTTGCTTGCCTGCGTGAAAGTGGC GTTACTGCCTTCTTTACCCGGAGTTCAGCCGCAAACATTCCAGTGAATATGGAAATGTGTAAGAAAATGAACCTGAATGA AGACACCTATTCGATCTCTATTCCGTTAGGTGCCACCATCAATATGGCTGGTGCAGCCATCACCATCACGGTGCTGACAC TGGCGGCGGTTCATACCCTAGGCATTACCGTTGACCTGCCAACAGCCCTGCTACTGAGTGTGGTTGCGGCGATCTGTGCC TGTGGTGCATCCGGTGTTGCCGGTGGCTCTCTGTTACTGATCCCACTGGCTTGCAGCATGTTCGGCATTCCAAACGATGT GGCAATGCAAGTGGTTGGTGTTGGCTTCATTATCGGCGTATTGCAGGATTCAGCCGAAACTGCACTGAACTCTTCAACCG ATGTGTTGTTTACTGCAGCGGTCTGTCAGGCTGAGGATGCCAAACTGGCTAATCCTGACCCACTGGCAGCGGGTAAGTCA GTCTAA
Upstream 100 bases:
>100_bases CGGGCAGAACATATTAAATTTCACTTGGGAAGAGGCATTGCTAGAAGCTATGGAAAAGACACAGTCTGTATTTATACGAT TTATCGTCAACGGTAGTTTA
Downstream 100 bases:
>100_bases ATACTCGGTTTTACCTACGCAAAATGCCAGTCAGTTAAGTTTGACTGGCATTTTTTTGTGCCCAGAAAACCCCCAGCTAG GCTGGGGGTTCAGTAAAGCT
Product: serine/threonine transporter SstT
Products: NA
Alternate protein names: Na(+)/serine-threonine symporter [H]
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQKTSIRPILFLYVLGTFSAALV AVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDMS DAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLIVYWKIRRNPYPLVFACLRESG VTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHTLGITVDLPTALLLSVVAAICA CGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGKS V
Sequences:
>Translated_401_residues MKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQKTSIRPILFLYVLGTFSAALV AVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDMS DAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLIVYWKIRRNPYPLVFACLRESG VTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHTLGITVDLPTALLLSVVAAICA CGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGKS V >Mature_401_residues MKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQKTSIRPILFLYVLGTFSAALV AVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIANPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDMS DAVTLVVRVVIRFAPLGIFGLVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLIVYWKIRRNPYPLVFACLRESG VTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHTLGITVDLPTALLLSVVAAICA CGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGVLQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGKS V
Specific function: Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system) [H]
COG id: COG3633
COG function: function code E; Na+/serine symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI223468564, Length=254, Percent_Identity=28.3464566929134, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI223468566, Length=254, Percent_Identity=28.3464566929134, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI5032093, Length=254, Percent_Identity=28.3464566929134, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4827012, Length=243, Percent_Identity=24.2798353909465, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI169790839, Length=279, Percent_Identity=24.3727598566308, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI66773030, Length=272, Percent_Identity=24.6323529411765, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI21314632, Length=259, Percent_Identity=27.4131274131274, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI40254478, Length=273, Percent_Identity=26.007326007326, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1789473, Length=390, Percent_Identity=78.974358974359, Blast_Score=601, Evalue=1e-173, Organism=Escherichia coli, GI1790514, Length=432, Percent_Identity=23.3796296296296, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1789947, Length=387, Percent_Identity=24.5478036175711, Blast_Score=77, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17537407, Length=451, Percent_Identity=24.1685144124169, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71983106, Length=276, Percent_Identity=25.3623188405797, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983099, Length=276, Percent_Identity=25.3623188405797, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71996953, Length=269, Percent_Identity=26.7657992565056, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193206505, Length=292, Percent_Identity=27.7397260273973, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24583025, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI17137668, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=3e-13, Organism=Drosophila melanogaster, GI24583023, Length=279, Percent_Identity=27.5985663082437, Blast_Score=74, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR023025 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 41283; Mature: 41283
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: PS00435 PEROXIDASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQK CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH NPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDMSDAVTLVVRVVIRFAPLGIFG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLIVYWKIRRNPYPLVFACLRESG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCC VTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHTL CEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHH GITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGV CCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGKSV HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKQILIGLVAGIVLALVSTPAAIAVGLLGSLFVGALKAVAPVLVLMLVIASIANHKKGQK CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TSIRPILFLYVLGTFSAALVAVVVSFIYPSTLILVAESADITPPSGIVEVLHGLLNSIIA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHH NPIHALLNANYIGILAWAVGLGIALRHAADTTKALINDMSDAVTLVVRVVIRFAPLGIFG HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVASTIAATGFGALQLYAQLLVVLIGCMLLVALVVNPLIVYWKIRRNPYPLVFACLRESG HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCC VTAFFTRSSAANIPVNMEMCKKMNLNEDTYSISIPLGATINMAGAAITITVLTLAAVHTL CEEEEECCCCCCCCCCHHHHHCCCCCCCCEEEEECCCCEEECCCHHHHHHHHHHHHHHHH GITVDLPTALLLSVVAAICACGASGVAGGSLLLIPLACSMFGIPNDVAMQVVGVGFIIGV CCEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LQDSAETALNSSTDVLFTAAVCQAEDAKLANPDPLAAGKSV HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA