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The map label for this gene is yebC [C]

Identifier: 162319783

GI number: 162319783

Start: 3485104

End: 3485853

Strand: Reverse

Name: yebC [C]

Synonym: amb3220

Alternate gene names: 162319783

Gene position: 3485853-3485104 (Counterclockwise)

Preceding gene: 83312321

Following gene: 83312318

Centisome position: 70.18

GC content: 66.93

Gene sequence:

>750_bases
ATGGCCGGGCATTCACAGTTCAAGAACATCATGCATCGCAAGGGCGCGCAGGACGCCAAGCGTGCCAAGGTCTTCACCAA
GCTGATCCGCGAACTGACGGTTTCGGCCAAATCCGGCATGCCTGACCCGGCGGCCAATCCACGCCTGCGCGCCGCCATCG
TCGCCGCCCGCGCCGCCAACATGTCCAAGGACACCATGGACCGCGCCATCAAGCGCGGTGCCGGCGGCGAGGACGGCACC
AATTACGAGGAAGTGCGTTACGAGGGCTATGGCCCCGGCTCGGTGGCCATCATCGTCGAGGGCCTGACCGACAACCGCAA
TCGCACCGCCACCGAGGTGCGGACCGCCTTCAACAAGAACGGCGGCGCGCTGGGCGAGACCAATTCCGTGTCGTTCATGT
TCGACCGGGTGGGCGCCATCCGCTACCCGGCCTCCGCCGCCGGGGCCGAGGCCATGTTCGAAGGGGCGCTCGACGCCGGT
GCGGACAATGTGGAATCCGACGAGGACGGCCACGAGATCACGTGCGCCCCCGACGACCTGGGCGCGGTGCGCGACGCCCT
GGAAGCCAAGTTCGGCACGCCGGAATACGCCCGTCTCGACTGGAAGCCCCAGACCACGGTGCCGGTGGCCGACGAGGAGA
CCGCCCGGACCCTGCTGAAACTGCTGGACACCCTGGAGGACAACGACGACGTCCAGCGGGTCCAGGCCAATTTCGAGATC
CCCGACGACATCATGGAAAAGCTCGGCTGA

Upstream 100 bases:

>100_bases
GGAGACATGCCGCGTTGGCGGCGTGATGCCTGTTGCTTTGCCACAACATGTGGTATAGGCACCGGTCGATCTTCATTTCA
TCGGGATTTGGTGGCGGAAA

Downstream 100 bases:

>100_bases
TGAGAATCCTGGGGCTTGATCCTGGGTTGCGCAATACCGGCTGGGGCATCATCGATGCGGTCGACAACCGTCTGCGCCAT
GTGGCCGACGGAGTGATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAANMSKDTMDRAIKRGAGGEDGT
NYEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKNGGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEGALDAG
ADNVESDEDGHEITCAPDDLGAVRDALEAKFGTPEYARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEI
PDDIMEKLG

Sequences:

>Translated_249_residues
MAGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAANMSKDTMDRAIKRGAGGEDGT
NYEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKNGGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEGALDAG
ADNVESDEDGHEITCAPDDLGAVRDALEAKFGTPEYARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEI
PDDIMEKLG
>Mature_248_residues
AGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAANMSKDTMDRAIKRGAGGEDGTN
YEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKNGGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEGALDAGA
DNVESDEDGHEITCAPDDLGAVRDALEAKFGTPEYARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEIP
DDIMEKLG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=250, Percent_Identity=28.4, Blast_Score=107, Evalue=1e-23,
Organism=Escherichia coli, GI1788171, Length=249, Percent_Identity=49.7991967871486, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=38.135593220339, Blast_Score=137, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6321458, Length=263, Percent_Identity=32.319391634981, Blast_Score=115, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24583305, Length=224, Percent_Identity=27.2321428571429, Blast_Score=67, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26866; Mature: 26735

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAAN
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
MSKDTMDRAIKRGAGGEDGTNYEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC
GGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEGALDAGADNVESDEDGHEITCAPDDL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHH
GAVRDALEAKFGTPEYARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEI
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PDDIMEKLG
CHHHHHHCC
>Mature Secondary Structure 
AGHSQFKNIMHRKGAQDAKRAKVFTKLIRELTVSAKSGMPDPAANPRLRAAIVAARAAN
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHC
MSKDTMDRAIKRGAGGEDGTNYEEVRYEGYGPGSVAIIVEGLTDNRNRTATEVRTAFNKN
CCHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCC
GGALGETNSVSFMFDRVGAIRYPASAAGAEAMFEGALDAGADNVESDEDGHEITCAPDDL
CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHH
GAVRDALEAKFGTPEYARLDWKPQTTVPVADEETARTLLKLLDTLEDNDDVQRVQANFEI
HHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCC
PDDIMEKLG
CHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA