Click here to switch to the map view.

The map label for this gene is yagR [C]

Identifier: 162149051

GI number: 162149051

Start: 3371759

End: 3374065

Strand: Direct

Name: yagR [C]

Synonym: GDI_3281

Alternate gene names: 162149051

Gene position: 3371759-3374065 (Clockwise)

Preceding gene: 162149050

Following gene: 162149052

Centisome position: 85.49

GC content: 70.0

Gene sequence:

>2307_bases
ATGGACAAGCGCGGCGGCGCGACGGGGCAGATGTCGCGCCGGGGCTTCCTGATGATCGCGGCGGGCGGCGCGGGCGCCCT
GTTCGGCTTCCCGGCGGCGCGCGCGGCGGAACAGTTCCCCGCTGCCGGCCTTCCCGGCAACGGCGCGTTCGAACCCACGA
TCTGGTGCGCCATCGCCCCGGACGGCACCGTGACCGTCAACATCATCCGGGCCGAGATGGGCCAGCATATCGGTTCCGCC
CTGGCGCGGATCATCGCGGACGAGATGGACGCGGACTGGAACCGCGTGCGCATCAACTATGTCGACAGCGACCCGAAATG
GGGCCTGATGGTCACGGGCGGAAGCTGGTCGGTCTGGATGACATGGGACGTCTTCCGCCAGGCGGGCGCCGCGGCCCGCA
TCGCGCTGACCGAGGCCGGGGCCGGCCTGCTGGGCGTGGCGCCCGGCCAGTGCATCACCCGCGACGGCATGGTCGTGGCC
GGCAGCCGCAGCATCAGCTACGGCGACATCGTGGCGCGCGCCCATCCGTCGCACAGCTTCACGCCCGACGAAATGGCCAA
GCTGCCGCTGAAGCCGGCGTCCGAACGGCGCCTGGTCGGCAACGACACGCTGAAGGCGCTGGACATTCCGCCCAAGACCA
ACGGCACGGCGATCTACGGCATCGACGCGCGGGTCGAGGGGATGGTCTATGCCCGGCCGAAAATGCCGCCCACCCGTTAC
GGTTCCCGCGTCCGTTCGGTCGATGACAGCGCCGCGCGGACGGTCAAGGGCTATCAGCGCTACATCGAACTCGACGACCC
GTCCGGCGTCGTGCAGGGCTGGGTCGTCGCCGTCGCCAGCACCTATACCGCCGCGATCCGTGCCGCCGACCTGCTGAAGG
TCGACTGGGCACCGGGCGATGCCGTCCATGTCTCGGAACAGGACGTCATCGATCACGGGCGCGCGCAGATCGACCGCAAG
GATGGCGGCGTGATGGTGTTCGACGATCCCGGCGTCGATGCCGCCTTCGCCGCCGCCGCCACGACCTTCGCGCAGGACTA
CACCTGCGCCTCGGTGCTGCATTACCAGCTGGAACCCACCAACGCCCTGGCGTTCGAAAAGGACGGCATCTTCGAGATCC
ATGCCGGCAACCAGTGGCAGTCGCTGATCCTGCCGACCCTGGCCAAGGCCCTGGAGCGACCGGAGGACAAGATCGTCCTG
CGCAGCTACCTGCTGGGCGGCGGGTTCGGCCGCCGCCTGAACGGCGACTACATGATCCCGGCCGCCCTGGCGTCGAAGGC
GCTGGGCGGCAAGCCGGTCAAGCTGATCCTGACCCGGTCGGACGACATGCAGTTCGATTCCTTCCGCTCGCCCTCCATCC
AGCGCGTGCGGGTGGCCTTCGACGGCAAGCACGCCATCACGGCGATGGAGTACCACGCCTCGGCCGGCTGGCCGACGCAG
GTCATGGCCGCCGCCTTCATGTCCAAGGGCGTGGACGGCAAGAAGTACGACCCGTTCGCCATCGCCGGCGGCGACCATTG
GTACGAGGTCGGCGCCTTCCGCGTCCGCGCCCTGTCCAACGACCTGGCCAACCGGACCTTCCGCCCCGGCTGGCTGCGAT
CGGTCAGCCCGGGCTGGACCAGCTGGGGACTGGAGTCCGGCTGGGACGAAATCGCGCACGCCCAGGGCCGTGACGCCGTC
CAGTTCCGGCTGGACCATCTGACGGGTGCCGGCCGCAACAAGGGCCAGGCGCCGGATTCCACCGGCGGCGCGCTACGCCA
GGCCGCCGTGGTCCGCCGCGTGGCCGAAAAGGCCGGCTGGGGGCGTGCCCTGCCCGCCGATACCGGCCTGGGCATCGCCA
CGACATTCGGCCAGGAACGCGGCATGCCGACCTGGATCGCCTGCTGCGCGCAGGTCCATGTGGACCGCGCGACGGGGATC
GTGCGCTGCCAGAAGCTGACCATCGTCGTCGATGCCGGCACCATCGTCGATCCCGACGGCGCGCGGGCGCAGACCGAGGG
CGCGGCCCTGTGGGGGCTGAGCATGGCGCTGTTCGAGGGATCGGAAATCGTCAACGGCCTGCCCCGCGACCGCAACCTGG
ACACCTATACCCCCCTGCGCATCGCCGACGTGCCGGAGATGGATATCGAATTCCTGCCCAGCACCGAAAAGCCGACGGGC
CTGGGCGAGCCCGGCACCACGGTCGTGGCCCCGGCCATCGGGAACGCGATCTTCAACGCCGTCGGGGTGCGGATGCGCCA
CCTGCCCATCCGTCCGGCGGATGTGCTGCATGCCCTGCGGAGCAGGAACGGCACCGCATCAACCTGA

Upstream 100 bases:

>100_bases
TCGCTCTGCCGCTGCATGACCTATATCCGCATTCGCGACGCCATCAAGAAGGCCGCCCTGGCCATGCGGGAGGAACCGTC
CAATGGGTAGGCTGAGCCAG

Downstream 100 bases:

>100_bases
AACCGGCCGCGCCATGACCCTGCTGCCCTATATCGTCGCCGCCACGTTCTTCATGGAGTATCTGGACTCCACGATCATCG
CGACGGCGCTACCGTCCATG

Product: aldehyde dehydrogenase

Products: NA

Alternate protein names: ALDH [H]

Number of amino acids: Translated: 768; Mature: 768

Protein sequence:

>768_residues
MDKRGGATGQMSRRGFLMIAAGGAGALFGFPAARAAEQFPAAGLPGNGAFEPTIWCAIAPDGTVTVNIIRAEMGQHIGSA
LARIIADEMDADWNRVRINYVDSDPKWGLMVTGGSWSVWMTWDVFRQAGAAARIALTEAGAGLLGVAPGQCITRDGMVVA
GSRSISYGDIVARAHPSHSFTPDEMAKLPLKPASERRLVGNDTLKALDIPPKTNGTAIYGIDARVEGMVYARPKMPPTRY
GSRVRSVDDSAARTVKGYQRYIELDDPSGVVQGWVVAVASTYTAAIRAADLLKVDWAPGDAVHVSEQDVIDHGRAQIDRK
DGGVMVFDDPGVDAAFAAAATTFAQDYTCASVLHYQLEPTNALAFEKDGIFEIHAGNQWQSLILPTLAKALERPEDKIVL
RSYLLGGGFGRRLNGDYMIPAALASKALGGKPVKLILTRSDDMQFDSFRSPSIQRVRVAFDGKHAITAMEYHASAGWPTQ
VMAAAFMSKGVDGKKYDPFAIAGGDHWYEVGAFRVRALSNDLANRTFRPGWLRSVSPGWTSWGLESGWDEIAHAQGRDAV
QFRLDHLTGAGRNKGQAPDSTGGALRQAAVVRRVAEKAGWGRALPADTGLGIATTFGQERGMPTWIACCAQVHVDRATGI
VRCQKLTIVVDAGTIVDPDGARAQTEGAALWGLSMALFEGSEIVNGLPRDRNLDTYTPLRIADVPEMDIEFLPSTEKPTG
LGEPGTTVVAPAIGNAIFNAVGVRMRHLPIRPADVLHALRSRNGTAST

Sequences:

>Translated_768_residues
MDKRGGATGQMSRRGFLMIAAGGAGALFGFPAARAAEQFPAAGLPGNGAFEPTIWCAIAPDGTVTVNIIRAEMGQHIGSA
LARIIADEMDADWNRVRINYVDSDPKWGLMVTGGSWSVWMTWDVFRQAGAAARIALTEAGAGLLGVAPGQCITRDGMVVA
GSRSISYGDIVARAHPSHSFTPDEMAKLPLKPASERRLVGNDTLKALDIPPKTNGTAIYGIDARVEGMVYARPKMPPTRY
GSRVRSVDDSAARTVKGYQRYIELDDPSGVVQGWVVAVASTYTAAIRAADLLKVDWAPGDAVHVSEQDVIDHGRAQIDRK
DGGVMVFDDPGVDAAFAAAATTFAQDYTCASVLHYQLEPTNALAFEKDGIFEIHAGNQWQSLILPTLAKALERPEDKIVL
RSYLLGGGFGRRLNGDYMIPAALASKALGGKPVKLILTRSDDMQFDSFRSPSIQRVRVAFDGKHAITAMEYHASAGWPTQ
VMAAAFMSKGVDGKKYDPFAIAGGDHWYEVGAFRVRALSNDLANRTFRPGWLRSVSPGWTSWGLESGWDEIAHAQGRDAV
QFRLDHLTGAGRNKGQAPDSTGGALRQAAVVRRVAEKAGWGRALPADTGLGIATTFGQERGMPTWIACCAQVHVDRATGI
VRCQKLTIVVDAGTIVDPDGARAQTEGAALWGLSMALFEGSEIVNGLPRDRNLDTYTPLRIADVPEMDIEFLPSTEKPTG
LGEPGTTVVAPAIGNAIFNAVGVRMRHLPIRPADVLHALRSRNGTAST
>Mature_768_residues
MDKRGGATGQMSRRGFLMIAAGGAGALFGFPAARAAEQFPAAGLPGNGAFEPTIWCAIAPDGTVTVNIIRAEMGQHIGSA
LARIIADEMDADWNRVRINYVDSDPKWGLMVTGGSWSVWMTWDVFRQAGAAARIALTEAGAGLLGVAPGQCITRDGMVVA
GSRSISYGDIVARAHPSHSFTPDEMAKLPLKPASERRLVGNDTLKALDIPPKTNGTAIYGIDARVEGMVYARPKMPPTRY
GSRVRSVDDSAARTVKGYQRYIELDDPSGVVQGWVVAVASTYTAAIRAADLLKVDWAPGDAVHVSEQDVIDHGRAQIDRK
DGGVMVFDDPGVDAAFAAAATTFAQDYTCASVLHYQLEPTNALAFEKDGIFEIHAGNQWQSLILPTLAKALERPEDKIVL
RSYLLGGGFGRRLNGDYMIPAALASKALGGKPVKLILTRSDDMQFDSFRSPSIQRVRVAFDGKHAITAMEYHASAGWPTQ
VMAAAFMSKGVDGKKYDPFAIAGGDHWYEVGAFRVRALSNDLANRTFRPGWLRSVSPGWTSWGLESGWDEIAHAQGRDAV
QFRLDHLTGAGRNKGQAPDSTGGALRQAAVVRRVAEKAGWGRALPADTGLGIATTFGQERGMPTWIACCAQVHVDRATGI
VRCQKLTIVVDAGTIVDPDGARAQTEGAALWGLSMALFEGSEIVNGLPRDRNLDTYTPLRIADVPEMDIEFLPSTEKPTG
LGEPGTTVVAPAIGNAIFNAVGVRMRHLPIRPADVLHALRSRNGTAST

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI91823271, Length=326, Percent_Identity=25.1533742331288, Blast_Score=70, Evalue=9e-12,
Organism=Escherichia coli, GI1786478, Length=153, Percent_Identity=34.640522875817, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI17737937, Length=294, Percent_Identity=27.5510204081633, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274
- InterPro:   IPR012368
- InterPro:   IPR006311 [H]

Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.2.99.3 [H]

Molecular weight: Translated: 82168; Mature: 82168

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRGGATGQMSRRGFLMIAAGGAGALFGFPAARAAEQFPAAGLPGNGAFEPTIWCAIAP
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC
DGTVTVNIIRAEMGQHIGSALARIIADEMDADWNRVRINYVDSDPKWGLMVTGGSWSVWM
CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEE
TWDVFRQAGAAARIALTEAGAGLLGVAPGQCITRDGMVVAGSRSISYGDIVARAHPSHSF
EHHHHHHCCCEEEEEEEECCCCEEECCCCCEEECCCEEEECCCCCCCCCEEEECCCCCCC
TPDEMAKLPLKPASERRLVGNDTLKALDIPPKTNGTAIYGIDARVEGMVYARPKMPPTRY
CHHHHHHCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEECCEECEEEEECCCCCHHHH
GSRVRSVDDSAARTVKGYQRYIELDDPSGVVQGWVVAVASTYTAAIRAADLLKVDWAPGD
HHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
AVHVSEQDVIDHGRAQIDRKDGGVMVFDDPGVDAAFAAAATTFAQDYTCASVLHYQLEPT
EEECCHHHHHHCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEHEEEEEECCC
NALAFEKDGIFEIHAGNQWQSLILPTLAKALERPEDKIVLRSYLLGGGFGRRLNGDYMIP
CEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEH
AALASKALGGKPVKLILTRSDDMQFDSFRSPSIQRVRVAFDGKHAITAMEYHASAGWPTQ
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHH
VMAAAFMSKGVDGKKYDPFAIAGGDHWYEVGAFRVRALSNDLANRTFRPGWLRSVSPGWT
HHHHHHHHCCCCCCCCCCEEEECCCCEEEEHHEEEEHHHHHHHCCCCCCCCCCCCCCCCC
SWGLESGWDEIAHAQGRDAVQFRLDHLTGAGRNKGQAPDSTGGALRQAAVVRRVAEKAGW
CCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
GRALPADTGLGIATTFGQERGMPTWIACCAQVHVDRATGIVRCQKLTIVVDAGTIVDPDG
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCEECCCC
ARAQTEGAALWGLSMALFEGSEIVNGLPRDRNLDTYTPLRIADVPEMDIEFLPSTEKPTG
CCCCCCCCEEEEHHHHHHCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCC
LGEPGTTVVAPAIGNAIFNAVGVRMRHLPIRPADVLHALRSRNGTAST
CCCCCCEEECHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MDKRGGATGQMSRRGFLMIAAGGAGALFGFPAARAAEQFPAAGLPGNGAFEPTIWCAIAP
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEEEECC
DGTVTVNIIRAEMGQHIGSALARIIADEMDADWNRVRINYVDSDPKWGLMVTGGSWSVWM
CCEEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEECCCEEEEE
TWDVFRQAGAAARIALTEAGAGLLGVAPGQCITRDGMVVAGSRSISYGDIVARAHPSHSF
EHHHHHHCCCEEEEEEEECCCCEEECCCCCEEECCCEEEECCCCCCCCCEEEECCCCCCC
TPDEMAKLPLKPASERRLVGNDTLKALDIPPKTNGTAIYGIDARVEGMVYARPKMPPTRY
CHHHHHHCCCCCCCCCEECCCCCEEEEECCCCCCCCEEEEECCEECEEEEECCCCCHHHH
GSRVRSVDDSAARTVKGYQRYIELDDPSGVVQGWVVAVASTYTAAIRAADLLKVDWAPGD
HHHHHCCCHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC
AVHVSEQDVIDHGRAQIDRKDGGVMVFDDPGVDAAFAAAATTFAQDYTCASVLHYQLEPT
EEECCHHHHHHCCHHEEECCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEHEEEEEECCC
NALAFEKDGIFEIHAGNQWQSLILPTLAKALERPEDKIVLRSYLLGGGFGRRLNGDYMIP
CEEEEECCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEH
AALASKALGGKPVKLILTRSDDMQFDSFRSPSIQRVRVAFDGKHAITAMEYHASAGWPTQ
HHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEECCCCCHHH
VMAAAFMSKGVDGKKYDPFAIAGGDHWYEVGAFRVRALSNDLANRTFRPGWLRSVSPGWT
HHHHHHHHCCCCCCCCCCEEEECCCCEEEEHHEEEEHHHHHHHCCCCCCCCCCCCCCCCC
SWGLESGWDEIAHAQGRDAVQFRLDHLTGAGRNKGQAPDSTGGALRQAAVVRRVAEKAGW
CCCCCCCHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
GRALPADTGLGIATTFGQERGMPTWIACCAQVHVDRATGIVRCQKLTIVVDAGTIVDPDG
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCEECCCC
ARAQTEGAALWGLSMALFEGSEIVNGLPRDRNLDTYTPLRIADVPEMDIEFLPSTEKPTG
CCCCCCCCEEEEHHHHHHCCHHHHCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCC
LGEPGTTVVAPAIGNAIFNAVGVRMRHLPIRPADVLHALRSRNGTAST
CCCCCCEEECHHHHHHHHHHHCCCEEECCCCHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2606906 [H]