Click here to switch to the map view.

The map label for this gene is sppA [H]

Identifier: 162148930

GI number: 162148930

Start: 3247986

End: 3248927

Strand: Reverse

Name: sppA [H]

Synonym: GDI_3160

Alternate gene names: 162148930

Gene position: 3248927-3247986 (Counterclockwise)

Preceding gene: 162148931

Following gene: 162148929

Centisome position: 82.37

GC content: 68.15

Gene sequence:

>942_bases
ATGGCGACTGATCCCGACCTGACGGTCGACCGGCTGCGACTGCGGCGTCGGCTGGTATTCTGGCGGATCGCCGCCGTTGC
CTCGTTCGTGCTGGCCCTGGTCGGCGTGGGCGGTCATTCGCTGATGCGCAGCGGCGGTTTCGCGTCGCGCGATCATCTGG
TGCGCGTGCGCGTGGCGGGCATCATCGGATCGGACAATCGCAAGCTGATCGACCTGGTCGACAAGGCGGCGAAAACCGAT
TCGGTACGCGGCATGATCCTGGCCGTGGACAGCCCCGGCGGATCGGTCAGCGGGGGCGAGGCACTGCATGACGCGGTGGC
CCGTTTCGCGGCCCGCAAGCCGGTGGCGGTGACGATGGGGGGCCTGGCCGCTTCGGCGGGGTACATGATTTCGGTGCCGG
CGCAGCGCGTGTTCGCGGTCCAGTCCACCCTGACGGGGTCGATCGGCGTGATCATGGAAGCACCGGACGTGTCGGGCCTG
CTGGACCGGGTGGGGGTCAAGGTCGATCAACTGGTCTCCGGCCCGATGAAGGGCCAGCCTTCGGGAACGCAGCCCCTGTC
GCCGGAAGGGCGGCAGATGCTGCAGGGGGTGGTGGCGGACCTGTTCGACCAGTTCGTCACCATGGTGGCCGACGGGCGGC
ATATGCCGGTCGAACGGGTGCGGACCCTGGCCGACGGCCGGCCCTATACCGGCCGGCAGGCGCTGTCGCTGGGACTGATC
GACCAGATCGGGGACGAGCGCGACGCCAAGGCGTGGCTGACCAGTACCCGGCACCTGAGCGGGACGATTCCGGTCGTGGA
CCTGAAAGTGACGACCGGGCAGGGCTGGATGCACCGGATCACGCGCAGCATGCTGGGCGTCGTTTTCGGTGACGAGTGGG
CAGGAAGCGTGCTTTCGCAAGGCGTTGCGCTTGACGGGGCTGTTGCGATCTGGAAACCTTGA

Upstream 100 bases:

>100_bases
GAACGACGATTCCGCGGCCAAGCCGGCCCGGCGCGGACGCAAGGCCGCCGTGTCGTAACGATGGTGGGTTCTGGTATTGG
GCTGGTCCGGGTGATGCCGC

Downstream 100 bases:

>100_bases
ACACGATCTCGGGAGGGGAAGGATGACCAAATCGGAGCTGATCGCCGAACTGGCTGCGGCGAATCCGCACCTTCTCAGCC
GCGACGTGGAATTGATCGTC

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MATDPDLTVDRLRLRRRLVFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAGIIGSDNRKLIDLVDKAAKTD
SVRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMGGLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGL
LDRVGVKVDQLVSGPMKGQPSGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLI
DQIGDERDAKAWLTSTRHLSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQGVALDGAVAIWKP

Sequences:

>Translated_313_residues
MATDPDLTVDRLRLRRRLVFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAGIIGSDNRKLIDLVDKAAKTD
SVRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMGGLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGL
LDRVGVKVDQLVSGPMKGQPSGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLI
DQIGDERDAKAWLTSTRHLSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQGVALDGAVAIWKP
>Mature_312_residues
ATDPDLTVDRLRLRRRLVFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAGIIGSDNRKLIDLVDKAAKTDS
VRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMGGLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGLL
DRVGVKVDQLVSGPMKGQPSGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLID
QIGDERDAKAWLTSTRHLSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQGVALDGAVAIWKP

Specific function: Digestion of the cleaved signal peptides [H]

COG id: COG0616

COG function: function code OU; Periplasmic serine proteases (ClpP class)

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S49 family [H]

Homologues:

Organism=Escherichia coli, GI1788064, Length=171, Percent_Identity=42.1052631578947, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1787527, Length=164, Percent_Identity=27.4390243902439, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004635
- InterPro:   IPR002142 [H]

Pfam domain/function: PF01343 Peptidase_S49 [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 33139; Mature: 33008

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDPDLTVDRLRLRRRLVFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEE
IIGSDNRKLIDLVDKAAKTDSVRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMG
EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGLLDRVGVKVDQLVSGPMKGQP
CHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCCCCCC
SGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
DQIGDERDAKAWLTSTRHLSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQ
HHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHC
GVALDGAVAIWKP
CCCCCCEEEEECC
>Mature Secondary Structure 
ATDPDLTVDRLRLRRRLVFWRIAAVASFVLALVGVGGHSLMRSGGFASRDHLVRVRVAG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCEEEEEEEE
IIGSDNRKLIDLVDKAAKTDSVRGMILAVDSPGGSVSGGEALHDAVARFAARKPVAVTMG
EECCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GLAASAGYMISVPAQRVFAVQSTLTGSIGVIMEAPDVSGLLDRVGVKVDQLVSGPMKGQP
CHHHCCCEEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCHHHHHCCCCCCCC
SGTQPLSPEGRQMLQGVVADLFDQFVTMVADGRHMPVERVRTLADGRPYTGRQALSLGLI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHH
DQIGDERDAKAWLTSTRHLSGTIPVVDLKVTTGQGWMHRITRSMLGVVFGDEWAGSVLSQ
HHHCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHC
GVALDGAVAIWKP
CCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]