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The map label for this gene is ydbC [H]

Identifier: 162148614

GI number: 162148614

Start: 2932370

End: 2933302

Strand: Reverse

Name: ydbC [H]

Synonym: GDI_2841

Alternate gene names: 162148614

Gene position: 2933302-2932370 (Counterclockwise)

Preceding gene: 162148615

Following gene: 162148609

Centisome position: 74.37

GC content: 61.31

Gene sequence:

>933_bases
GTGCCCGCCGAGGCGGGCACATTCTTGAGGAAAGGTAGGACAATGAGCACTTCGAGCCATGACGCCGCCAGATCCGGCAG
CTTTAAAATCGGCGGCGATCTCGACGTCAACCGCCTGGGTTTTGGCGCGATGCGTATTACCGGCAAAGGCGTTTGGGGGC
CACCCGCCGATCACGACGAAGCTATCCGCACGTTGAAGCGGCTTCCGGAACTCGGCGTCAACTTCATCGACACGGCCGAT
TCCTATGGTCCGGATGTGTCAGAATGGCTGATCCGCGAGGCGCTGCATCCCTACCCAAAAGGGCTCACGATCGCGACGAA
GGGTGGCCTGACCCGTTCGGGGCCTGACATCTGGTGGCCGGTCGGACGGCCGGAATACCTGCTTCAGCAGGTGCATAAGA
GCCTGCGCAATCTCGGCGTCGAACAGATTGAGCTGTGGCAGTTACACCGCATTGATCCAAAGGTTCCGGCGGACGAACAG
TTCGACGCCATCAAATCGCTGCTCGATCAGAAACTCGTCCGCCACGCGGGATTGAGCGAGGTATCCATCGCGGACATCGA
GGCGGCCTCGAAATTCTTCGACGTCGCGACCGTCCAGAACCGCTATAATCTGGTCGACCGTACCAGCGAGGACGTGCTCG
ACTATTGCACCGCCCAGGGCATCGGCTTCATCCCGTGGTTTCCGCTCGCCGCCGGCGATCTCGCAAAGCCGGGCTCGGTG
TTGGACGCCATCTCGGGGAAATATAACGCCACGCCCGGCCAGATTGCCCTGGCCTGGATCCTCAGACGCAGCCCGGTCAT
GCTGCCGATCCCCGGAACGTCCAAAGTCGCGCATCTGGAACAGAACGTCGCTGCCGTCGACATCATCCTGTCCGACGAAG
ACTTCTCGGCGCTGGACGCGGAAGGCCGCAGGCTGTTTCAGTCCGCAACATGA

Upstream 100 bases:

>100_bases
TTTCTGAACCCGCATTTCCGTAAGGCGATCATGATCGCCGCTGTTGCCTGGTACGGATGCCTACCCACATCTATAACGTG
ACATGCTGGCGAAGACATTG

Downstream 100 bases:

>100_bases
CGGCTTCTGGCAGCACACGAGACCCGCGTCATGACTCCAAGTGAGCATGAGATGCGTCAGGTGTTTTTGCATGATTATAT
CTGGTCCAAATGATGGCCTC

Product: aldo-keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPAEAGTFLRKGRTMSTSSHDAARSGSFKIGGDLDVNRLGFGAMRITGKGVWGPPADHDEAIRTLKRLPELGVNFIDTAD
SYGPDVSEWLIREALHPYPKGLTIATKGGLTRSGPDIWWPVGRPEYLLQQVHKSLRNLGVEQIELWQLHRIDPKVPADEQ
FDAIKSLLDQKLVRHAGLSEVSIADIEAASKFFDVATVQNRYNLVDRTSEDVLDYCTAQGIGFIPWFPLAAGDLAKPGSV
LDAISGKYNATPGQIALAWILRRSPVMLPIPGTSKVAHLEQNVAAVDIILSDEDFSALDAEGRRLFQSAT

Sequences:

>Translated_310_residues
MPAEAGTFLRKGRTMSTSSHDAARSGSFKIGGDLDVNRLGFGAMRITGKGVWGPPADHDEAIRTLKRLPELGVNFIDTAD
SYGPDVSEWLIREALHPYPKGLTIATKGGLTRSGPDIWWPVGRPEYLLQQVHKSLRNLGVEQIELWQLHRIDPKVPADEQ
FDAIKSLLDQKLVRHAGLSEVSIADIEAASKFFDVATVQNRYNLVDRTSEDVLDYCTAQGIGFIPWFPLAAGDLAKPGSV
LDAISGKYNATPGQIALAWILRRSPVMLPIPGTSKVAHLEQNVAAVDIILSDEDFSALDAEGRRLFQSAT
>Mature_309_residues
PAEAGTFLRKGRTMSTSSHDAARSGSFKIGGDLDVNRLGFGAMRITGKGVWGPPADHDEAIRTLKRLPELGVNFIDTADS
YGPDVSEWLIREALHPYPKGLTIATKGGLTRSGPDIWWPVGRPEYLLQQVHKSLRNLGVEQIELWQLHRIDPKVPADEQF
DAIKSLLDQKLVRHAGLSEVSIADIEAASKFFDVATVQNRYNLVDRTSEDVLDYCTAQGIGFIPWFPLAAGDLAKPGSVL
DAISGKYNATPGQIALAWILRRSPVMLPIPGTSKVAHLEQNVAAVDIILSDEDFSALDAEGRRLFQSAT

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=286, Percent_Identity=42.6573426573427, Blast_Score=216, Evalue=2e-57,
Organism=Escherichia coli, GI87081735, Length=306, Percent_Identity=27.7777777777778, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI1788070, Length=309, Percent_Identity=26.537216828479, Blast_Score=93, Evalue=3e-20,
Organism=Escherichia coli, GI1788081, Length=265, Percent_Identity=26.7924528301887, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789375, Length=286, Percent_Identity=23.7762237762238, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI48994888, Length=233, Percent_Identity=27.8969957081545, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786400, Length=256, Percent_Identity=29.296875, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71998625, Length=251, Percent_Identity=22.7091633466135, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6319958, Length=289, Percent_Identity=23.8754325259516, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 33879; Mature: 33748

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAEAGTFLRKGRTMSTSSHDAARSGSFKIGGDLDVNRLGFGAMRITGKGVWGPPADHDE
CCCCHHHHHHCCCCCCCCCCCHHCCCCEEECCCCCHHHHCCCEEEEECCCCCCCCCCHHH
AIRTLKRLPELGVNFIDTADSYGPDVSEWLIREALHPYPKGLTIATKGGLTRSGPDIWWP
HHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEC
VGRPEYLLQQVHKSLRNLGVEQIELWQLHRIDPKVPADEQFDAIKSLLDQKLVRHAGLSE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
VSIADIEAASKFFDVATVQNRYNLVDRTSEDVLDYCTAQGIGFIPWFPLAAGDLAKPGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
LDAISGKYNATPGQIALAWILRRSPVMLPIPGTSKVAHLEQNVAAVDIILSDEDFSALDA
HHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEEEEECCCCCCHHCH
EGRRLFQSAT
HHHHHHHCCC
>Mature Secondary Structure 
PAEAGTFLRKGRTMSTSSHDAARSGSFKIGGDLDVNRLGFGAMRITGKGVWGPPADHDE
CCCHHHHHHCCCCCCCCCCCHHCCCCEEECCCCCHHHHCCCEEEEECCCCCCCCCCHHH
AIRTLKRLPELGVNFIDTADSYGPDVSEWLIREALHPYPKGLTIATKGGLTRSGPDIWWP
HHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEC
VGRPEYLLQQVHKSLRNLGVEQIELWQLHRIDPKVPADEQFDAIKSLLDQKLVRHAGLSE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
VSIADIEAASKFFDVATVQNRYNLVDRTSEDVLDYCTAQGIGFIPWFPLAAGDLAKPGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
LDAISGKYNATPGQIALAWILRRSPVMLPIPGTSKVAHLEQNVAAVDIILSDEDFSALDA
HHHHCCCCCCCCHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCEEEEEEECCCCCCHHCH
EGRRLFQSAT
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]