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The map label for this gene is ahpC [C]

Identifier: 162148548

GI number: 162148548

Start: 2858654

End: 2859328

Strand: Reverse

Name: ahpC [C]

Synonym: GDI_2772

Alternate gene names: 162148548

Gene position: 2859328-2858654 (Counterclockwise)

Preceding gene: 162148549

Following gene: 162148546

Centisome position: 72.5

GC content: 63.26

Gene sequence:

>675_bases
ATGTCACTTCAGGCAAAACTCGATGCCTTTAAGGCCGATTTCGAAGCCGGCAAGCCGCCCTATAACGTGCCGCATGCGGT
CATCGAGGTGATGCACCGTGCCACTGCCGAACTGATCGCCGCCGGTGCCGCCGAGAAGGCGCTCAAGGCCGGTGACAGGG
CCCCGGATTTCACACTGAACGATCCGGAAGGCAATCCCGTCTCCACCGCCGATCTTCTGGCGCAGGGTCCGCTGGTCGTC
AGCTTCTATCGCGGTGTCTGGTGCCCTTACTGCAACATGGAACTGCAGGCGCTCGAAGCCGCCCTGCCGTCGTTCCGCGC
ACTCGGCGCGAACCTGATCGCCATCTCGCCGCAGACGGCGGTCAACAGCCGCAAGTCGGTGCGCCAGAACGCGCTTGATT
TCCCGATCCTGTCGGACACGCATAACGATGTGGCCGCAAAATTCCGCCTGCGTTTCGCGCTGCCGGATTATCTGGTCGAA
CTCTACCGGAACCTGAAGAACGATCTGCCGGGCTTCAACGGCGATGACAGCTGGACCCTGCCGATGCCGGGCCGCTTCGT
GATCGGCCAGGACGGCGTGATTCTCTATGCCGAGGTCAACCCGGACTATACCCGCCGCCCCGAGCCTGAAGACATGCTCC
CGGCCCTGCGCAAGGCCGCGAACGTCACGGCCTGA

Upstream 100 bases:

>100_bases
TTCCGGCCCGGAATGACCAATAGTCGTCCGAGCCGTCATCCCCCATGCAGCAGACCGCTCTATCTCAAGCATGTCGCTAC
GACTGACAAAGGAAACGACC

Downstream 100 bases:

>100_bases
TCCGCGCGATATTCCACGCCAGCCCGACATGTTGTTCCAGGCTGGCGCGGACGACATGAAAACGGAAGACAGACGATGAC
ACCGAGAGAAAAAGGCAACG

Product: alkyl hydroperoxide reductase

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: Peroxiredoxin; Redoxin; AhpC/Tsa Family Protein; Antioxidant AhpC/TSA Family; Peroxiredoxin-Like Protein; Peroxiredoxin/AhpC/Tsa Family Protein; Redoxin Superfamily; AhpC-TSA; AhpC/Tsa Family Protein Selenocysteine-Containing; Peroxiredoxin Family Protein; Peroxiredoxin Thioredoxin-Like Fold Protein; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MSLQAKLDAFKADFEAGKPPYNVPHAVIEVMHRATAELIAAGAAEKALKAGDRAPDFTLNDPEGNPVSTADLLAQGPLVV
SFYRGVWCPYCNMELQALEAALPSFRALGANLIAISPQTAVNSRKSVRQNALDFPILSDTHNDVAAKFRLRFALPDYLVE
LYRNLKNDLPGFNGDDSWTLPMPGRFVIGQDGVILYAEVNPDYTRRPEPEDMLPALRKAANVTA

Sequences:

>Translated_224_residues
MSLQAKLDAFKADFEAGKPPYNVPHAVIEVMHRATAELIAAGAAEKALKAGDRAPDFTLNDPEGNPVSTADLLAQGPLVV
SFYRGVWCPYCNMELQALEAALPSFRALGANLIAISPQTAVNSRKSVRQNALDFPILSDTHNDVAAKFRLRFALPDYLVE
LYRNLKNDLPGFNGDDSWTLPMPGRFVIGQDGVILYAEVNPDYTRRPEPEDMLPALRKAANVTA
>Mature_223_residues
SLQAKLDAFKADFEAGKPPYNVPHAVIEVMHRATAELIAAGAAEKALKAGDRAPDFTLNDPEGNPVSTADLLAQGPLVVS
FYRGVWCPYCNMELQALEAALPSFRALGANLIAISPQTAVNSRKSVRQNALDFPILSDTHNDVAAKFRLRFALPDYLVEL
YRNLKNDLPGFNGDDSWTLPMPGRFVIGQDGVILYAEVNPDYTRRPEPEDMLPALRKAANVTA

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24481; Mature: 24350

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLQAKLDAFKADFEAGKPPYNVPHAVIEVMHRATAELIAAGAAEKALKAGDRAPDFTLN
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DPEGNPVSTADLLAQGPLVVSFYRGVWCPYCNMELQALEAALPSFRALGANLIAISPQTA
CCCCCCCCHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHH
VNSRKSVRQNALDFPILSDTHNDVAAKFRLRFALPDYLVELYRNLKNDLPGFNGDDSWTL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCEEC
PMPGRFVIGQDGVILYAEVNPDYTRRPEPEDMLPALRKAANVTA
CCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLQAKLDAFKADFEAGKPPYNVPHAVIEVMHRATAELIAAGAAEKALKAGDRAPDFTLN
CCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DPEGNPVSTADLLAQGPLVVSFYRGVWCPYCNMELQALEAALPSFRALGANLIAISPQTA
CCCCCCCCHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCHHH
VNSRKSVRQNALDFPILSDTHNDVAAKFRLRFALPDYLVELYRNLKNDLPGFNGDDSWTL
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCCCCCEEC
PMPGRFVIGQDGVILYAEVNPDYTRRPEPEDMLPALRKAANVTA
CCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA