| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is 162148501
Identifier: 162148501
GI number: 162148501
Start: 2818415
End: 2819665
Strand: Direct
Name: 162148501
Synonym: GDI_2722
Alternate gene names: NA
Gene position: 2818415-2819665 (Clockwise)
Preceding gene: 162148500
Following gene: 162148506
Centisome position: 71.46
GC content: 62.11
Gene sequence:
>1251_bases ATGATTCTGAACGAGATGAATAGCGCAGCTTCGGTCGAGGATGTTCTGGCTCTGACGCTGGAGGCGCTGCGGGACGCCAA GGAGCGAATGCGCCCGGTATTCGGCCAGGAGCGGGTGGCGGCATCGGCAGGCCGGTTTCTGGAAACACTACTGGGCAACG AGCCGCGCAAGACCGGCTGGATGCGGGCTGAAGCTGCGGGCGATCCGGGGCCATGGCGACAGCAGGCCCTGCTTGGACGC GGGCATTGGGACGCCGATGCATTGCGGGACGTCGTGCGCGATCATGTTGTCGAGCATCTGGGGGATGCCGACGCGGTACT GGTGGTCGACGAGACTGGTTTCCTCAAGAAGGGCTCTGCATCATGCGGAGTGGGACGGCAATATACCGGGTCTGCCGGCA AGATCACGAATTGCCAGATTGGCGTGTTCGCAGCCTATGTCTCTGACAAGGGGCATGCTTTTCTCGACCGGGCTTTGTAT CTGCCGAAAGCCTGGACTGAAAAGCCTGAGCGGTTGGCGGCGGCCCATGTGCCGGGCGATGTCACGTTTGCCAGCAAACC GTCCCTGGCCACCGCGATGATCGGCCGGGCGCTTGCGGCCGATGTGCCGTTCCGGTGGGTGGCTGGCGACAGCGTCTATG GCGTCAGTGAACTGGAAATGGCTTTGCGCCGCGCAGGCAAAGGCTTCGTCCTTGGCGTCAACGCCAATCACTGGTTCCAT TCCTGGCGTCCGGACATCCACTGGTCCGGCGAGGCGCGCGAAATCATCAAGACCCTGCCGGACGAGACCTGGGTCCGCTG TTCCGCCGGACGCGGCACCAAGGGCGAACGACTGTATGACTGGCTGTATTGCCCGATGGCCGATCTCGAGGCCTCCGAAT ATTCAGGTATCTCAACCGGGATATGGACCCGTGGGCTGCTGGTCCGGCGTAATCCCTCCGATGGCGATCTGGCATATTTC ACGACCTGGTGCCCTCAGGGAACACCGCTTGAGATCTTGGTGCGTGTCGAGGGCACGCGCTGGCGAATCGAGGAAGGGTT CGAGACCGCCAAGAACGAATTCGGACTCGACCATAATGAAACCCGTTCCTGGCATGGCTGGCACCGTCACGTCTCGTTGG TCATGCTGGCTTACGCCATGATGGCCGCTGTGCGGTCCCAGGCCAACGCCATGGCGCTCAAAAAAAGCCAGTTGCACAAA CGCGGCCGCTCATCCGCTGGTCAATCCAGGAAATCCGCCGCCTCGCCGTGA
Upstream 100 bases:
>100_bases CACGACGGACAGCAAGGCATTGTCACGGTTGAAGAACTTTCGGATCGGGCTCTAACACTACAGTTGCGTTTTTCTGAGAG TTCTGAATCTATGGGTAACC
Downstream 100 bases:
>100_bases AAATTACCCGAAGCCGCGCCTCCATCGAGCATATCCTCCGATGGTCGTTCTTTCGACGTGCTCATCAGGCCGCAGCATAC CTCTCGCGCCTCAGGGCAAA
Product: transposase
Products: NA
Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; FOG Transposase; Transposase IS; Isrso17-Transposase Protein; Transposase ISRS; LOW QUALITY PROTEIN Transposase; Transposase-Like Protein; Transposase Helper Protein B Fragment; Transposase IS4 Protein; Transposase Of; IS Sequence; Transposase Protein; LOW QUALITY PROTEIN IS4 Family Transposase
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MILNEMNSAASVEDVLALTLEALRDAKERMRPVFGQERVAASAGRFLETLLGNEPRKTGWMRAEAAGDPGPWRQQALLGR GHWDADALRDVVRDHVVEHLGDADAVLVVDETGFLKKGSASCGVGRQYTGSAGKITNCQIGVFAAYVSDKGHAFLDRALY LPKAWTEKPERLAAAHVPGDVTFASKPSLATAMIGRALAADVPFRWVAGDSVYGVSELEMALRRAGKGFVLGVNANHWFH SWRPDIHWSGEAREIIKTLPDETWVRCSAGRGTKGERLYDWLYCPMADLEASEYSGISTGIWTRGLLVRRNPSDGDLAYF TTWCPQGTPLEILVRVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAMMAAVRSQANAMALKKSQLHK RGRSSAGQSRKSAASP
Sequences:
>Translated_416_residues MILNEMNSAASVEDVLALTLEALRDAKERMRPVFGQERVAASAGRFLETLLGNEPRKTGWMRAEAAGDPGPWRQQALLGR GHWDADALRDVVRDHVVEHLGDADAVLVVDETGFLKKGSASCGVGRQYTGSAGKITNCQIGVFAAYVSDKGHAFLDRALY LPKAWTEKPERLAAAHVPGDVTFASKPSLATAMIGRALAADVPFRWVAGDSVYGVSELEMALRRAGKGFVLGVNANHWFH SWRPDIHWSGEAREIIKTLPDETWVRCSAGRGTKGERLYDWLYCPMADLEASEYSGISTGIWTRGLLVRRNPSDGDLAYF TTWCPQGTPLEILVRVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAMMAAVRSQANAMALKKSQLHK RGRSSAGQSRKSAASP >Mature_416_residues MILNEMNSAASVEDVLALTLEALRDAKERMRPVFGQERVAASAGRFLETLLGNEPRKTGWMRAEAAGDPGPWRQQALLGR GHWDADALRDVVRDHVVEHLGDADAVLVVDETGFLKKGSASCGVGRQYTGSAGKITNCQIGVFAAYVSDKGHAFLDRALY LPKAWTEKPERLAAAHVPGDVTFASKPSLATAMIGRALAADVPFRWVAGDSVYGVSELEMALRRAGKGFVLGVNANHWFH SWRPDIHWSGEAREIIKTLPDETWVRCSAGRGTKGERLYDWLYCPMADLEASEYSGISTGIWTRGLLVRRNPSDGDLAYF TTWCPQGTPLEILVRVEGTRWRIEEGFETAKNEFGLDHNETRSWHGWHRHVSLVMLAYAMMAAVRSQANAMALKKSQLHK RGRSSAGQSRKSAASP
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45900; Mature: 45900
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILNEMNSAASVEDVLALTLEALRDAKERMRPVFGQERVAASAGRFLETLLGNEPRKTGW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC MRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDHVVEHLGDADAVLVVDETGFLKKGSA EEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC SCGVGRQYTGSAGKITNCQIGVFAAYVSDKGHAFLDRALYLPKAWTEKPERLAAAHVPGD CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHCCCHHHHHHHCCCCC VTFASKPSLATAMIGRALAADVPFRWVAGDSVYGVSELEMALRRAGKGFVLGVNANHWFH EEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC SWRPDIHWSGEAREIIKTLPDETWVRCSAGRGTKGERLYDWLYCPMADLEASEYSGISTG CCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCC IWTRGLLVRRNPSDGDLAYFTTWCPQGTPLEILVRVEGTRWRIEEGFETAKNEFGLDHNE HHHCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEHHHHHHHHHHCCCCCCC TRSWHGWHRHVSLVMLAYAMMAAVRSQANAMALKKSQLHKRGRSSAGQSRKSAASP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MILNEMNSAASVEDVLALTLEALRDAKERMRPVFGQERVAASAGRFLETLLGNEPRKTGW CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC MRAEAAGDPGPWRQQALLGRGHWDADALRDVVRDHVVEHLGDADAVLVVDETGFLKKGSA EEECCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC SCGVGRQYTGSAGKITNCQIGVFAAYVSDKGHAFLDRALYLPKAWTEKPERLAAAHVPGD CCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCHHCCCHHHHHHHCCCCC VTFASKPSLATAMIGRALAADVPFRWVAGDSVYGVSELEMALRRAGKGFVLGVNANHWFH EEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCC SWRPDIHWSGEAREIIKTLPDETWVRCSAGRGTKGERLYDWLYCPMADLEASEYSGISTG CCCCCEEECCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCHHCCCCCCC IWTRGLLVRRNPSDGDLAYFTTWCPQGTPLEILVRVEGTRWRIEEGFETAKNEFGLDHNE HHHCCEEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEHHHHHHHHHHCCCCCCC TRSWHGWHRHVSLVMLAYAMMAAVRSQANAMALKKSQLHKRGRSSAGQSRKSAASP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA