Click here to switch to the map view.

The map label for this gene is occM [H]

Identifier: 162148487

GI number: 162148487

Start: 2805418

End: 2805852

Strand: Reverse

Name: occM [H]

Synonym: GDI_2708

Alternate gene names: 162148487

Gene position: 2805852-2805418 (Counterclockwise)

Preceding gene: 162148489

Following gene: 162148486

Centisome position: 71.14

GC content: 65.75

Gene sequence:

>435_bases
GTGTTCTTCCTGACCGGCGTGGCTGGGCTGGACGTTTCGGAACGGACGGTGGCGATCTGGGCCATCGGGATGATCGCCAC
CGGATATATTGCGGAGATCGTCCATGGTGGGCTCCGGTCCGTTCCGACCGATCAGGTCGAGGCCGCCGTCACGCTGAACC
TGCCGCTGCTGGCGCGGTGGCGCCACGTGATCGTGCCGCAGGCGCTGCCGGTGATCGTCCCGCCGGCCGTCGGCTACCTG
GTGCTCTTCATCAAGGATACGGCCCTGGCCTCGCAGGTCGGGGTGCTGGAACTGAACCAGGCGGGGGTCATCCTGTCGAA
TCGCGGGCTGCCGACGATACAGGTCTTCCTGGCCGTGCTCGGCCTGTATTTCGCCCTGTCCTATCCGCTGACCCGCCTCA
GCCGCATGCTGGAGAAACGCCTTGCCCTATCTTGA

Upstream 100 bases:

>100_bases
GATACGGCTGCGATCGATCAAACGGAATGAAGCTGCTCATCCTGAAAGCTTACCGCAGATCGCCAGAGCCAGGTACCCCA
ACCCGACAGCCTGTTATATC

Downstream 100 bases:

>100_bases
CCTGCGCGGCGTGACCGTTCGCCATGGCACGCACGCCATTCTTCGCGATGTCGGGCTGCAGGTCGGGCGGGGGGAAATCG
TCAGCCTGATCGGCCCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MFFLTGVAGLDVSERTVAIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIVPQALPVIVPPAVGYL
VLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFALSYPLTRLSRMLEKRLALS

Sequences:

>Translated_144_residues
MFFLTGVAGLDVSERTVAIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIVPQALPVIVPPAVGYL
VLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFALSYPLTRLSRMLEKRLALS
>Mature_144_residues
MFFLTGVAGLDVSERTVAIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARWRHVIVPQALPVIVPPAVGYL
VLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVLGLYFALSYPLTRLSRMLEKRLALS

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI48994930, Length=125, Percent_Identity=32, Blast_Score=67, Evalue=3e-13,
Organism=Escherichia coli, GI87082239, Length=122, Percent_Identity=34.4262295081967, Blast_Score=67, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 15519; Mature: 15519

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFLTGVAGLDVSERTVAIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARW
CEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCHHHHHH
RHVIVPQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVL
HHHHCCCCCCEEECCHHHHEEHEEECHHHHHHCCEEEECCCCEEEECCCCHHHHHHHHHH
GLYFALSYPLTRLSRMLEKRLALS
HHHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFFLTGVAGLDVSERTVAIWAIGMIATGYIAEIVHGGLRSVPTDQVEAAVTLNLPLLARW
CEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCEEEEECCHHHHHH
RHVIVPQALPVIVPPAVGYLVLFIKDTALASQVGVLELNQAGVILSNRGLPTIQVFLAVL
HHHHCCCCCCEEECCHHHHEEHEEECHHHHHHCCEEEECCCCEEEECCCCHHHHHHHHHH
GLYFALSYPLTRLSRMLEKRLALS
HHHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1655707; 1732218 [H]