| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is fucI [H]
Identifier: 162148438
GI number: 162148438
Start: 2749143
End: 2750915
Strand: Reverse
Name: fucI [H]
Synonym: GDI_2657
Alternate gene names: 162148438
Gene position: 2750915-2749143 (Counterclockwise)
Preceding gene: 162148439
Following gene: 162148431
Centisome position: 69.75
GC content: 67.17
Gene sequence:
>1773_bases ATGAACAGATCTTTTCCGAAAATCGGCATCCGCCCGATCATCGACGGGCGGCGCGGCGGCATTCGCGAATCGCTTGAAGA CGTCACGATGGCGATGGCCCACCGCACGGCCGCGTTCCTGACCTCGGAATTGCGTCATGCCGGGGGCGAGGCCGTGGAGT GCGTGATCGCCGACACCTGCATCGCGGGATACGCCGAAGCCGCGGCGTGCGAAGAGAAATTCGCGTCCGCGCATGTCGGA CTGTCGATTTCGGTGACTCCGTGCTGGTGTTACGGGGCGGAGACCATCGACATGGTGCCGGAACGCCAGAAGGCGATCTG GGGCTTCAACGGCACGGAACGGCCGGGCGCGGTCTATCTGGCGGCGGCGCTGGCGGCCCATAACCAGAAGGGGCTGCCCG CCTTTTCCATCTATGGACGGGATGTCCAGGATTCCGGCGACGAGGCGATCCCGCCCGACGTGCGGGAAAAACTGCTGCGG TTTGCCCGCGCGGGGCTTGCGGTCGCCACGATGCGCGGGCGCACCTACCTGTCGATCGGCGGCGTGTCGATGGGAATAGC GGGGTCGATCGTCGATCACGCCTTTTTCCGGTCGTGGCTGGACATGCGCGTGCAGGCCGTGGACATGACGGAATTGCGGC GCCGGCTCGACAGGAAAATCTACGACACGGCGGAACTGGAGACCGCCCAGGCCTGGGCGGACGCGCGGTTCCGTTTCGGC ATCGAGCGCAACGCCCGTCCGCGTGACGCGGCCGGGAAACGCGAAATCCTGTCGGAAAGCCTGGCGATGACCCTGTGCAT TCGCGACATGATGCACGGCAACGCGCGTCTGGCGGCAATGGGGTGGGCGGAAGAGGCGCTGGGCTATGACGCGATCGCGG CGGGTTTCCAGGGGCAGCGTCACTGGACCGACCAGTATCCGAACGCCGATGTCGCGGAGGCATTGCTGAACAGCTCGTTC GACTGGAGCGGCGCGCGCGCACCCAGTATCCTGGCGACCGAGAATGATTGCCTGAACGGGGCGACCATGCTGTTCGGCCT GCTGATGAGCGGCAAGGCCCAGATTTTCGCCGATGTGCGCACGTTCTGGTCGCCCGAGGCGGTGCAGCGGGTGACGGGAC ACCGGCTGGAAGGCAAAAGCGCGGGTGGAATCCTGCATCTGATCAACTCGGGCGCGGCCGCGCTGGACGGGTCCTGCGCC GTGCGCGACGCGCAGGGTGCGCCCACGATCAAGCCGCACTGGCAGGTGGACGAGGACGATATCTCCGCCCTGCTGGCCGC GACGGACTGGTGCCCGGGACTGGAGGAATATTTCCGGGGCGGCGGCTTTTCCAGCCATTTCGTGACACGGGGTGGCGTGG CCTTCACCATGGTGCGGCTGAACCTGGTCGCCGGAATCGGTCCGGTGCTGCAGATCGCGGAAGGCTGGAGCGTGGACCTG CCGCCTGCCGTGCATGCGGCCCTGGAAGCCCGCACGGACCCGAGCTGGCCGACGACCTGGTTCGTGCCGCGGCTGACGGG GCATGGCGCGTTCCGCGACGTCTATTCCGTCATGGCGTCATGGGGGGCGAACCATGCCGTGCTCGCGCACGGGCACGTGG GCGCGGACTTCGTGGCGCTCGCCGCCATGCTGAGGATTCCGGTGTGCATGCACAACCTGGACGAAGCGGCGATCGATCGC CCCAGCCTCTGGGGGGCGTTCGGTTCCGACAAGGAAGGACAGGACTATCGCGCCTGCGCCGCCCTCGGCCCGCTATACGG GCGCAGGGGCTGA
Upstream 100 bases:
>100_bases AAGCCCACCAAATATGTCAACACGGGCGTGGTCTTCGTGACCAGTGCGAACCTGGATTCGCCGGAAGCCAAGCAGGTTCT GTATTGATCGGGAGGATGTC
Downstream 100 bases:
>100_bases CGGCTCAGGCCCTGTTTTTGGCTCTAGCGGAGCCGTCGCGCCGCGAGGTTTCCGATCAACTGGATGATGGTGACCATGAC GATCAGCACGGCCACGACCG
Product: L-fucose isomerase
Products: NA
Alternate protein names: 6-deoxy-L-galactose isomerase; FucIase [H]
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MNRSFPKIGIRPIIDGRRGGIRESLEDVTMAMAHRTAAFLTSELRHAGGEAVECVIADTCIAGYAEAAACEEKFASAHVG LSISVTPCWCYGAETIDMVPERQKAIWGFNGTERPGAVYLAAALAAHNQKGLPAFSIYGRDVQDSGDEAIPPDVREKLLR FARAGLAVATMRGRTYLSIGGVSMGIAGSIVDHAFFRSWLDMRVQAVDMTELRRRLDRKIYDTAELETAQAWADARFRFG IERNARPRDAAGKREILSESLAMTLCIRDMMHGNARLAAMGWAEEALGYDAIAAGFQGQRHWTDQYPNADVAEALLNSSF DWSGARAPSILATENDCLNGATMLFGLLMSGKAQIFADVRTFWSPEAVQRVTGHRLEGKSAGGILHLINSGAAALDGSCA VRDAQGAPTIKPHWQVDEDDISALLAATDWCPGLEEYFRGGGFSSHFVTRGGVAFTMVRLNLVAGIGPVLQIAEGWSVDL PPAVHAALEARTDPSWPTTWFVPRLTGHGAFRDVYSVMASWGANHAVLAHGHVGADFVALAAMLRIPVCMHNLDEAAIDR PSLWGAFGSDKEGQDYRACAALGPLYGRRG
Sequences:
>Translated_590_residues MNRSFPKIGIRPIIDGRRGGIRESLEDVTMAMAHRTAAFLTSELRHAGGEAVECVIADTCIAGYAEAAACEEKFASAHVG LSISVTPCWCYGAETIDMVPERQKAIWGFNGTERPGAVYLAAALAAHNQKGLPAFSIYGRDVQDSGDEAIPPDVREKLLR FARAGLAVATMRGRTYLSIGGVSMGIAGSIVDHAFFRSWLDMRVQAVDMTELRRRLDRKIYDTAELETAQAWADARFRFG IERNARPRDAAGKREILSESLAMTLCIRDMMHGNARLAAMGWAEEALGYDAIAAGFQGQRHWTDQYPNADVAEALLNSSF DWSGARAPSILATENDCLNGATMLFGLLMSGKAQIFADVRTFWSPEAVQRVTGHRLEGKSAGGILHLINSGAAALDGSCA VRDAQGAPTIKPHWQVDEDDISALLAATDWCPGLEEYFRGGGFSSHFVTRGGVAFTMVRLNLVAGIGPVLQIAEGWSVDL PPAVHAALEARTDPSWPTTWFVPRLTGHGAFRDVYSVMASWGANHAVLAHGHVGADFVALAAMLRIPVCMHNLDEAAIDR PSLWGAFGSDKEGQDYRACAALGPLYGRRG >Mature_590_residues MNRSFPKIGIRPIIDGRRGGIRESLEDVTMAMAHRTAAFLTSELRHAGGEAVECVIADTCIAGYAEAAACEEKFASAHVG LSISVTPCWCYGAETIDMVPERQKAIWGFNGTERPGAVYLAAALAAHNQKGLPAFSIYGRDVQDSGDEAIPPDVREKLLR FARAGLAVATMRGRTYLSIGGVSMGIAGSIVDHAFFRSWLDMRVQAVDMTELRRRLDRKIYDTAELETAQAWADARFRFG IERNARPRDAAGKREILSESLAMTLCIRDMMHGNARLAAMGWAEEALGYDAIAAGFQGQRHWTDQYPNADVAEALLNSSF DWSGARAPSILATENDCLNGATMLFGLLMSGKAQIFADVRTFWSPEAVQRVTGHRLEGKSAGGILHLINSGAAALDGSCA VRDAQGAPTIKPHWQVDEDDISALLAATDWCPGLEEYFRGGGFSSHFVTRGGVAFTMVRLNLVAGIGPVLQIAEGWSVDL PPAVHAALEARTDPSWPTTWFVPRLTGHGAFRDVYSVMASWGANHAVLAHGHVGADFVALAAMLRIPVCMHNLDEAAIDR PSLWGAFGSDKEGQDYRACAALGPLYGRRG
Specific function: Converts the aldose L-fucose into the corresponding ketose L-fuculose [H]
COG id: COG2407
COG function: function code G; L-fucose isomerase and related proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L-fucose isomerase family [H]
Homologues:
Organism=Escherichia coli, GI1789167, Length=587, Percent_Identity=70.3577512776831, Blast_Score=877, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015888 - InterPro: IPR004216 - InterPro: IPR012888 - InterPro: IPR005763 - InterPro: IPR009015 - InterPro: IPR012889 [H]
Pfam domain/function: PF02952 Fucose_iso_C; PF07881 Fucose_iso_N1; PF07882 Fucose_iso_N2 [H]
EC number: =5.3.1.25 [H]
Molecular weight: Translated: 63722; Mature: 63722
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSFPKIGIRPIIDGRRGGIRESLEDVTMAMAHRTAAFLTSELRHAGGEAVECVIADTC CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH IAGYAEAAACEEKFASAHVGLSISVTPCWCYGAETIDMVPERQKAIWGFNGTERPGAVYL HHHHHHHHHHHHHHHHHHCCEEEEECEEEECCCCHHHCCCCHHHHEECCCCCCCCCHHHH AAALAAHNQKGLPAFSIYGRDVQDSGDEAIPPDVREKLLRFARAGLAVATMRGRTYLSIG HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCEEEEEC GVSMGIAGSIVDHAFFRSWLDMRVQAVDMTELRRRLDRKIYDTAELETAQAWADARFRFG CCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC IERNARPRDAAGKREILSESLAMTLCIRDMMHGNARLAAMGWAEEALGYDAIAAGFQGQR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHCCCCCC HWTDQYPNADVAEALLNSSFDWSGARAPSILATENDCLNGATMLFGLLMSGKAQIFADVR CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH TFWSPEAVQRVTGHRLEGKSAGGILHLINSGAAALDGSCAVRDAQGAPTIKPHWQVDEDD HHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHH ISALLAATDWCPGLEEYFRGGGFSSHFVTRGGVAFTMVRLNLVAGIGPVLQIAEGWSVDL HHHHHHHHCCCCCHHHHHCCCCCCCHHEECCCHHHHHHHHHHHHCCCHHHHHHCCCCCCC PPAVHAALEARTDPSWPTTWFVPRLTGHGAFRDVYSVMASWGANHAVLAHGHVGADFVAL CHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH AAMLRIPVCMHNLDEAAIDRPSLWGAFGSDKEGQDYRACAALGPLYGRRG HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRSFPKIGIRPIIDGRRGGIRESLEDVTMAMAHRTAAFLTSELRHAGGEAVECVIADTC CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHH IAGYAEAAACEEKFASAHVGLSISVTPCWCYGAETIDMVPERQKAIWGFNGTERPGAVYL HHHHHHHHHHHHHHHHHHCCEEEEECEEEECCCCHHHCCCCHHHHEECCCCCCCCCHHHH AAALAAHNQKGLPAFSIYGRDVQDSGDEAIPPDVREKLLRFARAGLAVATMRGRTYLSIG HHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCHHEEEECCCEEEEEC GVSMGIAGSIVDHAFFRSWLDMRVQAVDMTELRRRLDRKIYDTAELETAQAWADARFRFG CCHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEC IERNARPRDAAGKREILSESLAMTLCIRDMMHGNARLAAMGWAEEALGYDAIAAGFQGQR CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCHHHHHHCCCCCC HWTDQYPNADVAEALLNSSFDWSGARAPSILATENDCLNGATMLFGLLMSGKAQIFADVR CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHH TFWSPEAVQRVTGHRLEGKSAGGILHLINSGAAALDGSCAVRDAQGAPTIKPHWQVDEDD HHCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCHHH ISALLAATDWCPGLEEYFRGGGFSSHFVTRGGVAFTMVRLNLVAGIGPVLQIAEGWSVDL HHHHHHHHCCCCCHHHHHCCCCCCCHHEECCCHHHHHHHHHHHHCCCHHHHHHCCCCCCC PPAVHAALEARTDPSWPTTWFVPRLTGHGAFRDVYSVMASWGANHAVLAHGHVGADFVAL CHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHH AAMLRIPVCMHNLDEAAIDRPSLWGAFGSDKEGQDYRACAALGPLYGRRG HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA