Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is 162148218

Identifier: 162148218

GI number: 162148218

Start: 2520999

End: 2523041

Strand: Reverse

Name: 162148218

Synonym: GDI_2435

Alternate gene names: NA

Gene position: 2523041-2520999 (Counterclockwise)

Preceding gene: 162148219

Following gene: 162148217

Centisome position: 63.97

GC content: 67.16

Gene sequence:

>2043_bases
GTGATCGTTGCGGCCTCCGGGTCGCGTCTTCTACCGCCTGCCTCGAAAGGGTATGTCCTCTTGCGTCCGCTTTCCAAACG
CTTCCTCGCCCTGTCCCTGACCACCGCCCTGGTGGCCGCCGGCATGGCGGGCCGTCCGTATTCCGTGCGCGCGGCCGACA
GCCAGCCGCAACCCGAGCCCCTGGCGCTTCCAGATTCCGTGCCGGTGCCGCGTGACGTGCCGTTCGGCGGAACCATTCAT
CTGACGGTCGATGCCACCGACCTGGCCCGGCGCGTCATGACGGTGCGTGAAAGCGTGCCGGTCCCTGCTGCGCTGGCGGA
AACGGGCGGCGACATGACCCTGCTCTACCCGATGTGGGTGCCGGGCGACCATTCGCCGACCGGCACGATCGAGCAGTTCG
GCGGCCTGGTGGTCAAGGCCGGCGTCGCCCCGCTGGAATGGGTGCGCGACACGGTGATGGTCAGCGCCTTCCATGTCCGG
GTGCCCAAGGGCGTGCATGCGCTGAACCTGTCGTTCCAGATTCTGTCGCCCGTGTCGCCCGAGGAAGGGCGCGTGGTCAT
GACGCCGGAGATGCTGAACGTCCAGTGGAATGCGGTGGCGCTGTACCCGGCGGGGTATTTCACGCGCCAGATCCCGGTGC
AGGCGGAACTGCGTCTGCCCCACGGATGGCAGTACGGCACCGCGCTGCGCGCCCATGGCCCGGCGGGCGACGTCGTCACG
TTCGACCCGGTGCCGTTCAACACGCTGGTGGATTCCCCGCTGTTCGCCGGGCGATATTTCCGCCGGTTCGACCTCGCCCC
CGGGGCTGCGGCGCCGGTAACGCTGAACGTGATGGCGGACAAGCCGGCGGAACTGGCGGCCACCGACGCCCAGGTCAAGG
CGCACCAGGATCTGGTGACGCAGGCAGGGCTGCTCTTCGGCTCGCACCATTACGACCATTACGATTTCCTGCTGGCTCTG
ACCAATGAACTGGGGCGGATCGGGCTGGAACATCACCGCTCCAGCGAGAACAGCGGTCCGCGCGGCTACTTCACCGAGTG
GGACAAGACCTTCGCCGTCCGTGACCTGCTGGCCCACGAATACACCCATTCCTGGAACGGCAAGTATCGCCGCCCCGCCG
ACCTGTGGGCGCCGAACTTCAACACCCCGCAGCGCGGGTCCGGCCTGTGGGTGTATGAAGGACAGACCCAGTACTGGGGC
TATGTCCTTTCCGCCCGGTCGGGCCTGATGACCGAACAGCAGGTGATCGACGCGCTGGCCGAGGTGGGCGCGATGTACGA
CACCCGCCAGGGACGCACCTGGCGTCCGCTGCAGGACACGACCAACGATCCGGTGATCGCCCAGCGTTCGCCCCTGTCCT
GGCGGAGCTGGCAGCGCAGCGAGGATTATTATTCCGAAGGCCAGCTGGTCTGGCTGGACGCGGATACGCTGATCCGCAAG
CTGTCGGACGGCAAGCACTCGCTGGACGATGTCGCGCGCCATTTCTTCGGCACCAATGACGGCAGCTTCGTCACCAGCAC
CTACCAGTTCGCCGACGTGGTGAAGGCGCTGAACGACATCCAGCCTTATGACTGGGCCACCTTCCTGCGCCAGCGGCTGG
ACCGCACATCGACCCATGCGCCGCTGGACGGCTTCACGCGCGGGGGATACCGCCTGGTCTATACCGACCAGCCGAACGAC
TGGGTCAAATCCTTCGCCGCCATGCGGCACGTGACGGATTTCAGCTTCTCGCTGGGCTTCCTGGTCGGCAAGGGCGGTAC
GCTGGCCAACGTCGAATGGGGCAGCCCGGCCTGGCAGGCCGGCGTGACCCGCGACGCGCAACTGGTCGCGGTGAATGGCG
AGGCCTACGATCCCGACGTGCTGCAGGACGCGATCACGGCGGCACGGGACCCGCACGCGGCCCCGATCGCACTGCTGCTG
CACATGGGGGACCACTACGTCACGATCGCCATCCCGTATCACGGCGGCCTGCGCTATCCGCATCTGCAGCGGATACCGGG
CACGCCCGACATGCTGGCTGACATCCTTGCACCGCGCCACTGA

Upstream 100 bases:

>100_bases
CGCCGATATGTCATGAAAATTTCATCATTATGCTGCAAGGGCGCAATCCGGCGAGGCGGGTCATGGTAGCGGGGCGGACC
ATTCCATGTCATTGCGATAG

Downstream 100 bases:

>100_bases
CGTAAAAGGCCGCGCCCCAGCGGGCGCGGCCATGGACAAGGGGGCGGCCGGGGGGGCCGCCCCGCCTGCTGCGCCGGCGG
GACGGGCACGAGGCCCGGGT

Product: glycyl aminopeptidase

Products: NA

Alternate protein names: Peptidase M; Glycyl Aminopeptidase; M61 Family Peptidase; Protease; M61 Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase Protein; PDZ Domain Family Protein; Trypsin-Like Serine Protease; PDZ/DHR/GLGFPeptidase M; Aminopeptidase N Family Protein; Protease With C-Terminal PDZ Domain; Metallopeptidase; Aminopeptidase; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MIVAASGSRLLPPASKGYVLLRPLSKRFLALSLTTALVAAGMAGRPYSVRAADSQPQPEPLALPDSVPVPRDVPFGGTIH
LTVDATDLARRVMTVRESVPVPAALAETGGDMTLLYPMWVPGDHSPTGTIEQFGGLVVKAGVAPLEWVRDTVMVSAFHVR
VPKGVHALNLSFQILSPVSPEEGRVVMTPEMLNVQWNAVALYPAGYFTRQIPVQAELRLPHGWQYGTALRAHGPAGDVVT
FDPVPFNTLVDSPLFAGRYFRRFDLAPGAAAPVTLNVMADKPAELAATDAQVKAHQDLVTQAGLLFGSHHYDHYDFLLAL
TNELGRIGLEHHRSSENSGPRGYFTEWDKTFAVRDLLAHEYTHSWNGKYRRPADLWAPNFNTPQRGSGLWVYEGQTQYWG
YVLSARSGLMTEQQVIDALAEVGAMYDTRQGRTWRPLQDTTNDPVIAQRSPLSWRSWQRSEDYYSEGQLVWLDADTLIRK
LSDGKHSLDDVARHFFGTNDGSFVTSTYQFADVVKALNDIQPYDWATFLRQRLDRTSTHAPLDGFTRGGYRLVYTDQPND
WVKSFAAMRHVTDFSFSLGFLVGKGGTLANVEWGSPAWQAGVTRDAQLVAVNGEAYDPDVLQDAITAARDPHAAPIALLL
HMGDHYVTIAIPYHGGLRYPHLQRIPGTPDMLADILAPRH

Sequences:

>Translated_680_residues
MIVAASGSRLLPPASKGYVLLRPLSKRFLALSLTTALVAAGMAGRPYSVRAADSQPQPEPLALPDSVPVPRDVPFGGTIH
LTVDATDLARRVMTVRESVPVPAALAETGGDMTLLYPMWVPGDHSPTGTIEQFGGLVVKAGVAPLEWVRDTVMVSAFHVR
VPKGVHALNLSFQILSPVSPEEGRVVMTPEMLNVQWNAVALYPAGYFTRQIPVQAELRLPHGWQYGTALRAHGPAGDVVT
FDPVPFNTLVDSPLFAGRYFRRFDLAPGAAAPVTLNVMADKPAELAATDAQVKAHQDLVTQAGLLFGSHHYDHYDFLLAL
TNELGRIGLEHHRSSENSGPRGYFTEWDKTFAVRDLLAHEYTHSWNGKYRRPADLWAPNFNTPQRGSGLWVYEGQTQYWG
YVLSARSGLMTEQQVIDALAEVGAMYDTRQGRTWRPLQDTTNDPVIAQRSPLSWRSWQRSEDYYSEGQLVWLDADTLIRK
LSDGKHSLDDVARHFFGTNDGSFVTSTYQFADVVKALNDIQPYDWATFLRQRLDRTSTHAPLDGFTRGGYRLVYTDQPND
WVKSFAAMRHVTDFSFSLGFLVGKGGTLANVEWGSPAWQAGVTRDAQLVAVNGEAYDPDVLQDAITAARDPHAAPIALLL
HMGDHYVTIAIPYHGGLRYPHLQRIPGTPDMLADILAPRH
>Mature_680_residues
MIVAASGSRLLPPASKGYVLLRPLSKRFLALSLTTALVAAGMAGRPYSVRAADSQPQPEPLALPDSVPVPRDVPFGGTIH
LTVDATDLARRVMTVRESVPVPAALAETGGDMTLLYPMWVPGDHSPTGTIEQFGGLVVKAGVAPLEWVRDTVMVSAFHVR
VPKGVHALNLSFQILSPVSPEEGRVVMTPEMLNVQWNAVALYPAGYFTRQIPVQAELRLPHGWQYGTALRAHGPAGDVVT
FDPVPFNTLVDSPLFAGRYFRRFDLAPGAAAPVTLNVMADKPAELAATDAQVKAHQDLVTQAGLLFGSHHYDHYDFLLAL
TNELGRIGLEHHRSSENSGPRGYFTEWDKTFAVRDLLAHEYTHSWNGKYRRPADLWAPNFNTPQRGSGLWVYEGQTQYWG
YVLSARSGLMTEQQVIDALAEVGAMYDTRQGRTWRPLQDTTNDPVIAQRSPLSWRSWQRSEDYYSEGQLVWLDADTLIRK
LSDGKHSLDDVARHFFGTNDGSFVTSTYQFADVVKALNDIQPYDWATFLRQRLDRTSTHAPLDGFTRGGYRLVYTDQPND
WVKSFAAMRHVTDFSFSLGFLVGKGGTLANVEWGSPAWQAGVTRDAQLVAVNGEAYDPDVLQDAITAARDPHAAPIALLL
HMGDHYVTIAIPYHGGLRYPHLQRIPGTPDMLADILAPRH

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75076; Mature: 75076

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVAASGSRLLPPASKGYVLLRPLSKRFLALSLTTALVAAGMAGRPYSVRAADSQPQPEP
CEEECCCCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
LALPDSVPVPRDVPFGGTIHLTVDATDLARRVMTVRESVPVPAALAETGGDMTLLYPMWV
CCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEC
PGDHSPTGTIEQFGGLVVKAGVAPLEWVRDTVMVSAFHVRVPKGVHALNLSFQILSPVSP
CCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEECCCCC
EEGRVVMTPEMLNVQWNAVALYPAGYFTRQIPVQAELRLPHGWQYGTALRAHGPAGDVVT
CCCEEEECCHHCCEEEEEEEEECCCCEEEECCCEEEEECCCCCCCCCEEECCCCCCCEEE
FDPVPFNTLVDSPLFAGRYFRRFDLAPGAAAPVTLNVMADKPAELAATDAQVKAHQDLVT
ECCCCCHHHHCCCHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHH
QAGLLFGSHHYDHYDFLLALTNELGRIGLEHHRSSENSGPRGYFTEWDKTFAVRDLLAHE
HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YTHSWNGKYRRPADLWAPNFNTPQRGSGLWVYEGQTQYWGYVLSARSGLMTEQQVIDALA
HCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCHHEEEECCCCCCHHHHHHHHHH
EVGAMYDTRQGRTWRPLQDTTNDPVIAQRSPLSWRSWQRSEDYYSEGQLVWLDADTLIRK
HHHHHHCCCCCCEECCCCCCCCCCEEECCCCCCHHCCCCCCCHHCCCCEEEEEHHHHHHH
LSDGKHSLDDVARHFFGTNDGSFVTSTYQFADVVKALNDIQPYDWATFLRQRLDRTSTHA
HCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PLDGFTRGGYRLVYTDQPNDWVKSFAAMRHVTDFSFSLGFLVGKGGTLANVEWGSPAWQA
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCHHHC
GVTRDAQLVAVNGEAYDPDVLQDAITAARDPHAAPIALLLHMGDHYVTIAIPYHGGLRYP
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCEEEEEEEECCCCCCCC
HLQRIPGTPDMLADILAPRH
CCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MIVAASGSRLLPPASKGYVLLRPLSKRFLALSLTTALVAAGMAGRPYSVRAADSQPQPEP
CEEECCCCEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCC
LALPDSVPVPRDVPFGGTIHLTVDATDLARRVMTVRESVPVPAALAETGGDMTLLYPMWV
CCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEEEC
PGDHSPTGTIEQFGGLVVKAGVAPLEWVRDTVMVSAFHVRVPKGVHALNLSFQILSPVSP
CCCCCCCCCHHHHCCEEEECCCCHHHHHHHHHHEEEEEEECCCCCEEEEEEEEEECCCCC
EEGRVVMTPEMLNVQWNAVALYPAGYFTRQIPVQAELRLPHGWQYGTALRAHGPAGDVVT
CCCEEEECCHHCCEEEEEEEEECCCCEEEECCCEEEEECCCCCCCCCEEECCCCCCCEEE
FDPVPFNTLVDSPLFAGRYFRRFDLAPGAAAPVTLNVMADKPAELAATDAQVKAHQDLVT
ECCCCCHHHHCCCHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHCCCHHHHHHHHHHH
QAGLLFGSHHYDHYDFLLALTNELGRIGLEHHRSSENSGPRGYFTEWDKTFAVRDLLAHE
HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
YTHSWNGKYRRPADLWAPNFNTPQRGSGLWVYEGQTQYWGYVLSARSGLMTEQQVIDALA
HCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEECCCCCCHHEEEECCCCCCHHHHHHHHHH
EVGAMYDTRQGRTWRPLQDTTNDPVIAQRSPLSWRSWQRSEDYYSEGQLVWLDADTLIRK
HHHHHHCCCCCCEECCCCCCCCCCEEECCCCCCHHCCCCCCCHHCCCCEEEEEHHHHHHH
LSDGKHSLDDVARHFFGTNDGSFVTSTYQFADVVKALNDIQPYDWATFLRQRLDRTSTHA
HCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCC
PLDGFTRGGYRLVYTDQPNDWVKSFAAMRHVTDFSFSLGFLVGKGGTLANVEWGSPAWQA
CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCHHHC
GVTRDAQLVAVNGEAYDPDVLQDAITAARDPHAAPIALLLHMGDHYVTIAIPYHGGLRYP
CCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHEEEEECCCEEEEEEEECCCCCCCC
HLQRIPGTPDMLADILAPRH
CCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA