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The map label for this gene is 162148217

Identifier: 162148217

GI number: 162148217

Start: 2519779

End: 2520900

Strand: Reverse

Name: 162148217

Synonym: GDI_2434

Alternate gene names: NA

Gene position: 2520900-2519779 (Counterclockwise)

Preceding gene: 162148218

Following gene: 162148216

Centisome position: 63.91

GC content: 67.2

Gene sequence:

>1122_bases
GTGACGTTCGAGGAACTGTTCTTCGACCTGGTCTACGCCTTCGCCGTCACGCAATTGTCGCACCTGCTTCTGCATCATCA
GACCACCCAGGGGGCGATCCAGGCGCTGATCCTGTGGTTCGCGGTCTGGCTGGGCTGGCAATATACCTGCTGGATCACCA
ACTGGTTCGACCCCGAACGCCCCGCGGTGCGCGGGCTGCTGTTCGGCATCACCCTGCTGGCGCTGCTGCTGGCGGCGGCG
CTGCCCGAGGCCTTCGGCGAACGCGGCATGCTGTTCGGCGTGACCTATGCCGTCATGCAGGTGGGGCGCACGGTCTTCGC
CCTGTGCGCCGTGGGTGCCGATCATCCCCTGGCCGCCAATTTCCGGCGCATGATGGTCTGGGTCGGTGCCGCAGCCCTGT
TCTGGATCGCCGGCGGACTGGCCGGCGAGGGGCCGCGTCCCTGGCTGTGGGCCTGCGGCGTGGCATGCGAATATATATCG
CCCATGTTCGGCTTTCCCGTGCCCGGACTGGGCCGGTCGCGGACGAGCGAATGGACCGTCGAGGGCGCGCACATGGCCGA
GCGCTGCCAGGCGTTCGTCCTGGTGGCGCTGGGCGAAACCGTGATCATGACCGGCGATACCCTGGCCGAAAACGGGGTGT
GGAGCGCGCCGGTCATCCTGGCCTTCCTGACTGCGTTCGTGACCTCGCTGGCAACGTGGTGGCTCTATTTCGGCACCAGC
GGCAAGGATGGCAGCGCCGCGATCCGCCATTCCGGCGATCCGGGGCGGATGGCGGCCTATTTCCATTATATCCACGTGAT
CCTGATCGCCGGCATCATCGTCATGGCGGTGGGCAGCGACCTGGTCCTGGCACACCCGCATGGCCCGGCCCGCCCGGTGC
CCGCCGCGATCATGGCGGCGGGGCCGGTGATCTTCCTGCTGGGCAGCCTTTTGTACAAGCGCGTGGTCTATGGCTGCATC
GCGCCGTCGCACCTGACGGCCATCGCGGCCCTGGTCGCCGGTTATCCGCTGGTGATTCACATGGACGTCCTGGACGCGGG
CATGACCATGACCGCGATCATGCTGCTGGCGGGATTCTGGGAAAGCCGGATCCTGCGCCATTTCCCCGCCGCCGGGGCCT
GA

Upstream 100 bases:

>100_bases
GACGTAAAAGGCCGCGCCCCAGCGGGCGCGGCCATGGACAAGGGGGCGGCCGGGGGGGCCGCCCCGCCTGCTGCGCCGGC
GGGACGGGCACGAGGCCCGG

Downstream 100 bases:

>100_bases
CGGCAACATGCGCGCGACGCTGGGCCGGATCATCCTGTTCGCCGACCTGGCCGGCACGGTGGTATTCGCGGCCGAGGGCG
CGATGGTGGCGGCCGCGCGC

Product: low temperature requirement A protein (LtrA)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MTFEELFFDLVYAFAVTQLSHLLLHHQTTQGAIQALILWFAVWLGWQYTCWITNWFDPERPAVRGLLFGITLLALLLAAA
LPEAFGERGMLFGVTYAVMQVGRTVFALCAVGADHPLAANFRRMMVWVGAAALFWIAGGLAGEGPRPWLWACGVACEYIS
PMFGFPVPGLGRSRTSEWTVEGAHMAERCQAFVLVALGETVIMTGDTLAENGVWSAPVILAFLTAFVTSLATWWLYFGTS
GKDGSAAIRHSGDPGRMAAYFHYIHVILIAGIIVMAVGSDLVLAHPHGPARPVPAAIMAAGPVIFLLGSLLYKRVVYGCI
APSHLTAIAALVAGYPLVIHMDVLDAGMTMTAIMLLAGFWESRILRHFPAAGA

Sequences:

>Translated_373_residues
MTFEELFFDLVYAFAVTQLSHLLLHHQTTQGAIQALILWFAVWLGWQYTCWITNWFDPERPAVRGLLFGITLLALLLAAA
LPEAFGERGMLFGVTYAVMQVGRTVFALCAVGADHPLAANFRRMMVWVGAAALFWIAGGLAGEGPRPWLWACGVACEYIS
PMFGFPVPGLGRSRTSEWTVEGAHMAERCQAFVLVALGETVIMTGDTLAENGVWSAPVILAFLTAFVTSLATWWLYFGTS
GKDGSAAIRHSGDPGRMAAYFHYIHVILIAGIIVMAVGSDLVLAHPHGPARPVPAAIMAAGPVIFLLGSLLYKRVVYGCI
APSHLTAIAALVAGYPLVIHMDVLDAGMTMTAIMLLAGFWESRILRHFPAAGA
>Mature_372_residues
TFEELFFDLVYAFAVTQLSHLLLHHQTTQGAIQALILWFAVWLGWQYTCWITNWFDPERPAVRGLLFGITLLALLLAAAL
PEAFGERGMLFGVTYAVMQVGRTVFALCAVGADHPLAANFRRMMVWVGAAALFWIAGGLAGEGPRPWLWACGVACEYISP
MFGFPVPGLGRSRTSEWTVEGAHMAERCQAFVLVALGETVIMTGDTLAENGVWSAPVILAFLTAFVTSLATWWLYFGTSG
KDGSAAIRHSGDPGRMAAYFHYIHVILIAGIIVMAVGSDLVLAHPHGPARPVPAAIMAAGPVIFLLGSLLYKRVVYGCIA
PSHLTAIAALVAGYPLVIHMDVLDAGMTMTAIMLLAGFWESRILRHFPAAGA

Specific function: Unknown

COG id: COG4292

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010640 [H]

Pfam domain/function: PF06772 LtrA [H]

EC number: NA

Molecular weight: Translated: 40307; Mature: 40176

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFEELFFDLVYAFAVTQLSHLLLHHQTTQGAIQALILWFAVWLGWQYTCWITNWFDPER
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
PAVRGLLFGITLLALLLAAALPEAFGERGMLFGVTYAVMQVGRTVFALCAVGADHPLAAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FRRMMVWVGAAALFWIAGGLAGEGPRPWLWACGVACEYISPMFGFPVPGLGRSRTSEWTV
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
EGAHMAERCQAFVLVALGETVIMTGDTLAENGVWSAPVILAFLTAFVTSLATWWLYFGTS
CHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GKDGSAAIRHSGDPGRMAAYFHYIHVILIAGIIVMAVGSDLVLAHPHGPARPVPAAIMAA
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHH
GPVIFLLGSLLYKRVVYGCIAPSHLTAIAALVAGYPLVIHMDVLDAGMTMTAIMLLAGFW
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHH
ESRILRHFPAAGA
HHHHHHHCCCCCC
>Mature Secondary Structure 
TFEELFFDLVYAFAVTQLSHLLLHHQTTQGAIQALILWFAVWLGWQYTCWITNWFDPER
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC
PAVRGLLFGITLLALLLAAALPEAFGERGMLFGVTYAVMQVGRTVFALCAVGADHPLAAN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
FRRMMVWVGAAALFWIAGGLAGEGPRPWLWACGVACEYISPMFGFPVPGLGRSRTSEWTV
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
EGAHMAERCQAFVLVALGETVIMTGDTLAENGVWSAPVILAFLTAFVTSLATWWLYFGTS
CHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
GKDGSAAIRHSGDPGRMAAYFHYIHVILIAGIIVMAVGSDLVLAHPHGPARPVPAAIMAA
CCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHH
GPVIFLLGSLLYKRVVYGCIAPSHLTAIAALVAGYPLVIHMDVLDAGMTMTAIMLLAGFW
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHH
ESRILRHFPAAGA
HHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9204561; 11481432 [H]