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The map label for this gene is ywkD [H]

Identifier: 162148199

GI number: 162148199

Start: 2505148

End: 2505564

Strand: Direct

Name: ywkD [H]

Synonym: GDI_2416

Alternate gene names: 162148199

Gene position: 2505148-2505564 (Clockwise)

Preceding gene: 162148196

Following gene: 162148200

Centisome position: 63.52

GC content: 64.51

Gene sequence:

>417_bases
TTGATCGACGCCCTTCATCACGTGGCTATTATCTGTGCGGATTACGACCGGTCGAAGGATTTTTATACGCGCATCCTCGG
CCTGCCGATCATTCGCGAGACCTATCGGGCCGAACGCCGATCCTGGAAATGCGACCTGGCCGTCGGCCATGCGCAGATCG
AACTGTTTTCCTTCCCGGACCCGCCGCCACGTCCCTCGCGTCCCGAGGCGCGCGGCCTGCGGCATCTGGCCTTCGCCGTG
CGGGACCTGCACGCGGCGGTCGAACACCTGCAGCAGGCCGGAATCGTGGTCGAGCCGATTCGCACCGACGCCCTGACCGG
GCGCGATTTCACCTTCTTCGCCGACCCCGACGACCTGCCGCTGGAATTGTATGAAGTAGATCCCGCTGGTCCGCCGCCCG
GCACCATGGCAACGTAG

Upstream 100 bases:

>100_bases
TCGTCTGCTCCTCCCGCTTGTTCATCCGGGACAAATCCCGTGTTCGGGCGTTTCGTCCTCTGCCCTGGTGCCTCAACACG
CTTGCCGGAAGGACAGTTCC

Downstream 100 bases:

>100_bases
CTGCCCCTGAAGGAGTAGAGGCCATGGCCGCCTATATCGTCTTCACCCGTGAATCGACCCACGATGCCGCCGAACTCGAC
ACCTATATGCAGGCAGTCGG

Product: glyoxylase I family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MIDALHHVAIICADYDRSKDFYTRILGLPIIRETYRAERRSWKCDLAVGHAQIELFSFPDPPPRPSRPEARGLRHLAFAV
RDLHAAVEHLQQAGIVVEPIRTDALTGRDFTFFADPDDLPLELYEVDPAGPPPGTMAT

Sequences:

>Translated_138_residues
MIDALHHVAIICADYDRSKDFYTRILGLPIIRETYRAERRSWKCDLAVGHAQIELFSFPDPPPRPSRPEARGLRHLAFAV
RDLHAAVEHLQQAGIVVEPIRTDALTGRDFTFFADPDDLPLELYEVDPAGPPPGTMAT
>Mature_138_residues
MIDALHHVAIICADYDRSKDFYTRILGLPIIRETYRAERRSWKCDLAVGHAQIELFSFPDPPPRPSRPEARGLRHLAFAV
RDLHAAVEHLQQAGIVVEPIRTDALTGRDFTFFADPDDLPLELYEVDPAGPPPGTMAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081697, Length=125, Percent_Identity=59.2, Blast_Score=142, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004360 [H]

Pfam domain/function: PF00903 Glyoxalase [H]

EC number: NA

Molecular weight: Translated: 15515; Mature: 15515

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDALHHVAIICADYDRSKDFYTRILGLPIIRETYRAERRSWKCDLAVGHAQIELFSFPD
CCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC
PPPRPSRPEARGLRHLAFAVRDLHAAVEHLQQAGIVVEPIRTDALTGRDFTFFADPDDLP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCCC
LELYEVDPAGPPPGTMAT
EEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIDALHHVAIICADYDRSKDFYTRILGLPIIRETYRAERRSWKCDLAVGHAQIELFSFPD
CCCCCCEEEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCEEEECCEEEEEEECCC
PPPRPSRPEARGLRHLAFAVRDLHAAVEHLQQAGIVVEPIRTDALTGRDFTFFADPDDLP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCCC
LELYEVDPAGPPPGTMAT
EEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]