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The map label for this gene is ctrA [H]

Identifier: 162148196

GI number: 162148196

Start: 2502401

End: 2503612

Strand: Direct

Name: ctrA [H]

Synonym: GDI_2413

Alternate gene names: 162148196

Gene position: 2502401-2503612 (Clockwise)

Preceding gene: 162148186

Following gene: 162148199

Centisome position: 63.45

GC content: 55.12

Gene sequence:

>1212_bases
ATGGATTACATGATCGATCGCTCGGCATCCGTTGCTCGAATCCTGGCCATCTCTGTCATGCTGGCTGGGTGCAGCGCCTT
GCCCAGCAGCGGCCCGGTCAGTTCACAGATCATACAAGCCGCAAAAGATCCGAAGCTGAACCCTATCGGTTTTCACATCG
TACCGCTTACACCAAAAACACTCAATATACTCCAGAATGAGACGCCTCCGCTCCTCTCCACCCTCGATAAAGAAGGGCCT
GGACAAGGAGAACATGGGGCCATTGGCCCGGGCGACGTTCTTTCGATCTCCGTTTTCGAGATTGGCAGCGGGCTGTTTTC
GGGTGGTGGTGGAGCGGCCACCGGGGGACGGGCGGCAGCGGGAACGGCAAGTACTGCGAGCGGGGGTGGTGGCGGTGGCA
CCACCGCCAGCGTTGAGGCGCTTCCCCCGACTGAAGTCGACGACCAGGGTTCGATTGCTTTTCCCTATATCGGTCGCATT
TTGGTCGCGGGACAAACGCCGACCCAACTTGCGAAGACGATCGAGAGCCAATTGGCCTCTAAGTCCCAGAATCCCCAAGT
TATCGTACGCGTCCTGACCGATCTTCACAATTCCATTATCGTGTCCGGCGACATTCTTCATCCTGGGCGTCAGATGCTTA
CCCTCGCCCATGAGGGACTTCTGGACATCATTGCGATGGGAGGCGGGGCAAGCCACTCATCCGAGGATAGCATGGTGATG
CTGACACGTCATGGCGTTACCGGACGCATACCCTTGCGTACACTTGAAACGCATCCTGACGAAAATATTCCGCTCATGCC
GGGCGACAGAGTGCAGGTTATCTATCTGCCCCGCACCTATACTGTTTTCGGCGCAACTCACGTCAATCAGACTCCGTTCA
ATACGCCAGTGCTCACACTTGACCAGGCCATAGCGCGAATTGGTGGACCATCTGATGATACCGCGGACGCCAACGCAATC
TATCTATTCCGTTACGAGAGCGACGAGGTCGCCCAAAAGCTTGGGCTAGCACCGAAAACTGGTGGCACACCGATTATCTA
CCATGTCGATCTGATGAACCCGACGAATTACTTTCTTGCCCAGAAGTTTGTCATGAAAGACAAGGATCTTATTTTCGTTT
CCAACGCAAAGGTCAACAAGCTGTATAAATTTCTGACCTTGATTGGCGCTGTGACCAGCCCGGCTATTACCGCCGCGTAC
GTGGCGAGATAG

Upstream 100 bases:

>100_bases
CAGACTATTTAGCACACACAACGACAAGCTACAGGGCTGCGGCGTTCTTGCATAATATTTTTTGACGTTGCATAAGGACC
TCAACATTGTCTCAGCTCGT

Downstream 100 bases:

>100_bases
GCCACTCCGGACTGTGTCACCCTTCGCGGCTTGTTCCTTGTCTTGACTTTCGGCGCTCGTTTGTGGGCGTAGCGCCGGAC
AACGTGTTTCGGCCTGGAGC

Product: polysaccharide export protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MDYMIDRSASVARILAISVMLAGCSALPSSGPVSSQIIQAAKDPKLNPIGFHIVPLTPKTLNILQNETPPLLSTLDKEGP
GQGEHGAIGPGDVLSISVFEIGSGLFSGGGGAATGGRAAAGTASTASGGGGGGTTASVEALPPTEVDDQGSIAFPYIGRI
LVAGQTPTQLAKTIESQLASKSQNPQVIVRVLTDLHNSIIVSGDILHPGRQMLTLAHEGLLDIIAMGGGASHSSEDSMVM
LTRHGVTGRIPLRTLETHPDENIPLMPGDRVQVIYLPRTYTVFGATHVNQTPFNTPVLTLDQAIARIGGPSDDTADANAI
YLFRYESDEVAQKLGLAPKTGGTPIIYHVDLMNPTNYFLAQKFVMKDKDLIFVSNAKVNKLYKFLTLIGAVTSPAITAAY
VAR

Sequences:

>Translated_403_residues
MDYMIDRSASVARILAISVMLAGCSALPSSGPVSSQIIQAAKDPKLNPIGFHIVPLTPKTLNILQNETPPLLSTLDKEGP
GQGEHGAIGPGDVLSISVFEIGSGLFSGGGGAATGGRAAAGTASTASGGGGGGTTASVEALPPTEVDDQGSIAFPYIGRI
LVAGQTPTQLAKTIESQLASKSQNPQVIVRVLTDLHNSIIVSGDILHPGRQMLTLAHEGLLDIIAMGGGASHSSEDSMVM
LTRHGVTGRIPLRTLETHPDENIPLMPGDRVQVIYLPRTYTVFGATHVNQTPFNTPVLTLDQAIARIGGPSDDTADANAI
YLFRYESDEVAQKLGLAPKTGGTPIIYHVDLMNPTNYFLAQKFVMKDKDLIFVSNAKVNKLYKFLTLIGAVTSPAITAAY
VAR
>Mature_403_residues
MDYMIDRSASVARILAISVMLAGCSALPSSGPVSSQIIQAAKDPKLNPIGFHIVPLTPKTLNILQNETPPLLSTLDKEGP
GQGEHGAIGPGDVLSISVFEIGSGLFSGGGGAATGGRAAAGTASTASGGGGGGTTASVEALPPTEVDDQGSIAFPYIGRI
LVAGQTPTQLAKTIESQLASKSQNPQVIVRVLTDLHNSIIVSGDILHPGRQMLTLAHEGLLDIIAMGGGASHSSEDSMVM
LTRHGVTGRIPLRTLETHPDENIPLMPGDRVQVIYLPRTYTVFGATHVNQTPFNTPVLTLDQAIARIGGPSDDTADANAI
YLFRYESDEVAQKLGLAPKTGGTPIIYHVDLMNPTNYFLAQKFVMKDKDLIFVSNAKVNKLYKFLTLIGAVTSPAITAAY
VAR

Specific function: May form an ATP-driven capsule polysaccharide export apparatus, in association with the BexA, BexB and BexC proteins. May function as a membrane anchor for capsular polysaccharides. Possible porin properties [H]

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BexD/CtrA/VexA family [H]

Homologues:

Organism=Escherichia coli, GI1788376, Length=382, Percent_Identity=24.869109947644, Blast_Score=99, Evalue=6e-22,
Organism=Escherichia coli, GI1787218, Length=387, Percent_Identity=24.8062015503876, Blast_Score=94, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003715 [H]

Pfam domain/function: PF02563 Poly_export [H]

EC number: NA

Molecular weight: Translated: 42169; Mature: 42169

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYMIDRSASVARILAISVMLAGCSALPSSGPVSSQIIQAAKDPKLNPIGFHIVPLTPKT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHH
LNILQNETPPLLSTLDKEGPGQGEHGAIGPGDVLSISVFEIGSGLFSGGGGAATGGRAAA
HHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
GTASTASGGGGGGTTASVEALPPTEVDDQGSIAFPYIGRILVAGQTPTQLAKTIESQLAS
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH
KSQNPQVIVRVLTDLHNSIIVSGDILHPGRQMLTLAHEGLLDIIAMGGGASHSSEDSMVM
CCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEE
LTRHGVTGRIPLRTLETHPDENIPLMPGDRVQVIYLPRTYTVFGATHVNQTPFNTPVLTL
EEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCEEHH
DQAIARIGGPSDDTADANAIYLFRYESDEVAQKLGLAPKTGGTPIIYHVDLMNPTNYFLA
HHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHH
QKFVMKDKDLIFVSNAKVNKLYKFLTLIGAVTSPAITAAYVAR
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MDYMIDRSASVARILAISVMLAGCSALPSSGPVSSQIIQAAKDPKLNPIGFHIVPLTPKT
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHH
LNILQNETPPLLSTLDKEGPGQGEHGAIGPGDVLSISVFEIGSGLFSGGGGAATGGRAAA
HHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
GTASTASGGGGGGTTASVEALPPTEVDDQGSIAFPYIGRILVAGQTPTQLAKTIESQLAS
CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHHHHHHH
KSQNPQVIVRVLTDLHNSIIVSGDILHPGRQMLTLAHEGLLDIIAMGGGASHSSEDSMVM
CCCCHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEE
LTRHGVTGRIPLRTLETHPDENIPLMPGDRVQVIYLPRTYTVFGATHVNQTPFNTPVLTL
EEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCEEEEEEEEECCCCCCCCCEEHH
DQAIARIGGPSDDTADANAIYLFRYESDEVAQKLGLAPKTGGTPIIYHVDLMNPTNYFLA
HHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHH
QKFVMKDKDLIFVSNAKVNKLYKFLTLIGAVTSPAITAAYVAR
HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2082145 [H]