Click here to switch to the map view.

The map label for this gene is rkpI [H]

Identifier: 162148185

GI number: 162148185

Start: 2488684

End: 2490267

Strand: Direct

Name: rkpI [H]

Synonym: GDI_2402

Alternate gene names: 162148185

Gene position: 2488684-2490267 (Clockwise)

Preceding gene: 162148180

Following gene: 162148186

Centisome position: 63.1

GC content: 61.87

Gene sequence:

>1584_bases
ATGCCACATCCAGAACAAGACCAAGGTAGTAGAATGCAGGCTTGGGCCATTGCTGTCGTATCGGTTCTCGGGCTGGTGAC
CCTTTTCGTGCTTCGGTTCACGAGTGGCAAGCTGACCCGATCGTTTCTCAACGATATCCCGGACATCGTGATCGGCATCA
CGCTGTGGCTGGCGCTGACATTGCTGACCCAGCGGCCGGCCTCGTCGGCCCTGCTGTGGACGGTTCTGGCCGCGGGCCTG
CTGCTGGCCGACCACACCAAACGCCAGGTCCTTCGGGAACCCGTTGTCTTTGCCGATGCCAGCGAACTCTTCCTGGTCTT
CACGCACCCGCGCTTCTACCTGCCCTATGTCCATCCCGCCGTCTTCTATGGAATCGGCGGAACGCTGGTCCTGGCGACGG
CGTGGCTGTTTTCGGTCGAACCGCCCGCCATGCCGGCCCATCCCGTACTGTCCCGCGTGGCGGGGGCCCTGCTGCTGGCC
GTTCCGATCGGTGCCTATTTCTGGCGCCCGTCGCTGAACATCATGGCAAAAGTCCTGCGCAAGTTCGGACCGAGCGGCGA
TCCGGTGCTGGACGCGCAAAAACTGGGCATGCTGGGCAGCTTCGCCGCCCATACGGTCTGCTCGCGCCAGGAACGGCCTG
AACGCCAGGCCGCCTGCAGCTTCGGCATCGTGACCGTGCCGGCGGACAAGCCGCCGGTGGTCCTGGTCCAGGCCGAATCC
TTCTTCGATATCGGCCGGCTGGACCCCACCCAGCCGTCCCCCCTGACGGAGTATATGGCCTGCCGGGACCGCGCCTGGCG
CCATGGCCACCTGAATGTCGATTCATGGGGGGCCAACACGACACGCAGCGAATTCGCGGTCATCAGCGGCGCCTCCCCGT
CCGACCTGGGACTGGATCGCTTCAATCCCTATTATTCCTTCGCCCGCCGTCCCCTGGACACCCTGGCCGCGCGCATGCGC
CAGGCGGGCTACCTGACCGTCTGCGTCCATCCCTACGACCGCCGTTTCTACGGCCGGCACAAGGTCATGCCCAATCTCGG
CTTCGACCAGTTCATCGGCGGCGAGGCCTTCGACGCCCCGCACGGCCACCTCGTCCCCGACGAGGTCCTGGGCGCCTGGA
TCAACAACTTCGTCGACCGCCAGACCCAACCCGTCTTCGTCTTCGCGATCACGGTTGCCAATCACGGCCCCTGGCCCGCG
CAGGCCACAACCCCGGGCCCCCTCGCGGAAAAACTCGGCGGCTACCTGGACAGCCTGATGGCCACTGACCGAATGATCGG
CCAACTCGCCTCATCAAGCTGGCTGAACGACAAAGGCGGGATCTTTGCACTGTATGGTGACCATCAACCCGCCCTGCCCG
CCCTGACCCAAGGTCATTTTAATATCAATTCGTCGACCGATTATTTCATTCTGGATACAGCACACCCAATAGATCGATCC
CGAAACGATATAGATGTTCACATGCTGGGCCACAGCGTAGCTAAGCGCCTGATGGAACGGCGTCTCAAGACAAGAAATAT
CATAGATTCCTCTCATTCGATTGACTCTCATCGAGGTTCAATCGGAACATTATTTGATCAATAA

Upstream 100 bases:

>100_bases
CCATTCCATAAAAAAACTGCAATATCAGCCCCTTGCTGCCCGGCATGGCAAACCGGCCCTCATCTGTGTATGGAGTAGCG
CTGGCACATGACCCCGGCGT

Downstream 100 bases:

>100_bases
CGCCAGACATAAAGTAAAATCAGGACAGAACCCAAATCATATATCCGTAATCGTCGGGGCGAAATCCTCTTGGCACCCCG
TCCGATTTTCCCAGGGTGAA

Product: capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MPHPEQDQGSRMQAWAIAVVSVLGLVTLFVLRFTSGKLTRSFLNDIPDIVIGITLWLALTLLTQRPASSALLWTVLAAGL
LLADHTKRQVLREPVVFADASELFLVFTHPRFYLPYVHPAVFYGIGGTLVLATAWLFSVEPPAMPAHPVLSRVAGALLLA
VPIGAYFWRPSLNIMAKVLRKFGPSGDPVLDAQKLGMLGSFAAHTVCSRQERPERQAACSFGIVTVPADKPPVVLVQAES
FFDIGRLDPTQPSPLTEYMACRDRAWRHGHLNVDSWGANTTRSEFAVISGASPSDLGLDRFNPYYSFARRPLDTLAARMR
QAGYLTVCVHPYDRRFYGRHKVMPNLGFDQFIGGEAFDAPHGHLVPDEVLGAWINNFVDRQTQPVFVFAITVANHGPWPA
QATTPGPLAEKLGGYLDSLMATDRMIGQLASSSWLNDKGGIFALYGDHQPALPALTQGHFNINSSTDYFILDTAHPIDRS
RNDIDVHMLGHSVAKRLMERRLKTRNIIDSSHSIDSHRGSIGTLFDQ

Sequences:

>Translated_527_residues
MPHPEQDQGSRMQAWAIAVVSVLGLVTLFVLRFTSGKLTRSFLNDIPDIVIGITLWLALTLLTQRPASSALLWTVLAAGL
LLADHTKRQVLREPVVFADASELFLVFTHPRFYLPYVHPAVFYGIGGTLVLATAWLFSVEPPAMPAHPVLSRVAGALLLA
VPIGAYFWRPSLNIMAKVLRKFGPSGDPVLDAQKLGMLGSFAAHTVCSRQERPERQAACSFGIVTVPADKPPVVLVQAES
FFDIGRLDPTQPSPLTEYMACRDRAWRHGHLNVDSWGANTTRSEFAVISGASPSDLGLDRFNPYYSFARRPLDTLAARMR
QAGYLTVCVHPYDRRFYGRHKVMPNLGFDQFIGGEAFDAPHGHLVPDEVLGAWINNFVDRQTQPVFVFAITVANHGPWPA
QATTPGPLAEKLGGYLDSLMATDRMIGQLASSSWLNDKGGIFALYGDHQPALPALTQGHFNINSSTDYFILDTAHPIDRS
RNDIDVHMLGHSVAKRLMERRLKTRNIIDSSHSIDSHRGSIGTLFDQ
>Mature_526_residues
PHPEQDQGSRMQAWAIAVVSVLGLVTLFVLRFTSGKLTRSFLNDIPDIVIGITLWLALTLLTQRPASSALLWTVLAAGLL
LADHTKRQVLREPVVFADASELFLVFTHPRFYLPYVHPAVFYGIGGTLVLATAWLFSVEPPAMPAHPVLSRVAGALLLAV
PIGAYFWRPSLNIMAKVLRKFGPSGDPVLDAQKLGMLGSFAAHTVCSRQERPERQAACSFGIVTVPADKPPVVLVQAESF
FDIGRLDPTQPSPLTEYMACRDRAWRHGHLNVDSWGANTTRSEFAVISGASPSDLGLDRFNPYYSFARRPLDTLAARMRQ
AGYLTVCVHPYDRRFYGRHKVMPNLGFDQFIGGEAFDAPHGHLVPDEVLGAWINNFVDRQTQPVFVFAITVANHGPWPAQ
ATTPGPLAEKLGGYLDSLMATDRMIGQLASSSWLNDKGGIFALYGDHQPALPALTQGHFNINSSTDYFILDTAHPIDRSR
NDIDVHMLGHSVAKRLMERRLKTRNIIDSSHSIDSHRGSIGTLFDQ

Specific function: Involved in antigen K (capsular polysaccharide) biosynthesis [H]

COG id: COG1368

COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: NA

Molecular weight: Translated: 58119; Mature: 57988

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHPEQDQGSRMQAWAIAVVSVLGLVTLFVLRFTSGKLTRSFLNDIPDIVIGITLWLALT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLTQRPASSALLWTVLAAGLLLADHTKRQVLREPVVFADASELFLVFTHPRFYLPYVHPA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCEECCHHHHH
VFYGIGGTLVLATAWLFSVEPPAMPAHPVLSRVAGALLLAVPIGAYFWRPSLNIMAKVLR
HHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KFGPSGDPVLDAQKLGMLGSFAAHTVCSRQERPERQAACSFGIVTVPADKPPVVLVQAES
HHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCEEEEECCC
FFDIGRLDPTQPSPLTEYMACRDRAWRHGHLNVDSWGANTTRSEFAVISGASPSDLGLDR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
FNPYYSFARRPLDTLAARMRQAGYLTVCVHPYDRRFYGRHKVMPNLGFDQFIGGEAFDAP
CCHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCCCCHHHHCCCCCCCCC
HGHLVPDEVLGAWINNFVDRQTQPVFVFAITVANHGPWPAQATTPGPLAEKLGGYLDSLM
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
ATDRMIGQLASSSWLNDKGGIFALYGDHQPALPALTQGHFNINSSTDYFILDTAHPIDRS
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCEEECCCCCEEEEECCCCCCCC
RNDIDVHMLGHSVAKRLMERRLKTRNIIDSSHSIDSHRGSIGTLFDQ
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PHPEQDQGSRMQAWAIAVVSVLGLVTLFVLRFTSGKLTRSFLNDIPDIVIGITLWLALT
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLTQRPASSALLWTVLAAGLLLADHTKRQVLREPVVFADASELFLVFTHPRFYLPYVHPA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCEECCHHHHH
VFYGIGGTLVLATAWLFSVEPPAMPAHPVLSRVAGALLLAVPIGAYFWRPSLNIMAKVLR
HHHCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
KFGPSGDPVLDAQKLGMLGSFAAHTVCSRQERPERQAACSFGIVTVPADKPPVVLVQAES
HHCCCCCCCCCHHHHCHHHHHHHHHHHHHHCCCHHHHHHCCCEEECCCCCCCEEEEECCC
FFDIGRLDPTQPSPLTEYMACRDRAWRHGHLNVDSWGANTTRSEFAVISGASPSDLGLDR
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
FNPYYSFARRPLDTLAARMRQAGYLTVCVHPYDRRFYGRHKVMPNLGFDQFIGGEAFDAP
CCHHHHHHHCCHHHHHHHHHHCCEEEEEECCCCHHHHCCCCCCCCCCHHHHCCCCCCCCC
HGHLVPDEVLGAWINNFVDRQTQPVFVFAITVANHGPWPAQATTPGPLAEKLGGYLDSLM
CCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
ATDRMIGQLASSSWLNDKGGIFALYGDHQPALPALTQGHFNINSSTDYFILDTAHPIDRS
HHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCEEECCCCCEEEEECCCCCCCC
RNDIDVHMLGHSVAKRLMERRLKTRNIIDSSHSIDSHRGSIGTLFDQ
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9079896; 11481430 [H]