| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is klb [C]
Identifier: 162148180
GI number: 162148180
Start: 2481893
End: 2483179
Strand: Direct
Name: klb [C]
Synonym: GDI_2397
Alternate gene names: 162148180
Gene position: 2481893-2483179 (Clockwise)
Preceding gene: 162148179
Following gene: 162148185
Centisome position: 62.93
GC content: 66.51
Gene sequence:
>1287_bases ATGACGGGACCGAAATTCGGCCGACGCCTCGGCGAACGCATCAAGCTGCTGGCCAGCCTGTCCGGTGCCGCACCGGCCCA GACAGGCTCGCGCGGCTGGTCCCTGCCGGGCGTGGAGGAAATGGAGTTCATGGCGAAGCGCGCGGCGGCGCTCGGCATCG CCGATCCGTTCTTCCGCCAGCATGACGGACTCGACGGGGCCACGACGTCGATCGACGGACGCAGCTACATCAATTTCTCG TCCTACGACTATCTCGGCCTGAACGGCGATCCCCGGATCATCGCCCGGGTCGAGGACGCGCTGCGCAAATATGGCACGAC GGTTTCGGCCAGCCGCATGGTGTCGGGGGAACGCCCGTTCCATCGGGAACTGGAACATGCGCTGGCCGAATGGCACGGCG CCGAGGACTGCGTCGTGATGGTATCGGGCCATGCGACCAACGTGACGACACTGGCCCAGTTGATGCGGCCCGGCGACCTG ATCGTCCATGACGCCCTGGCCCATAACAGCCTGATCCAGGGCGCGATCCTGTCCGGCGCCCGCCGCGTCGCCTTCGCCCA CAACGACGTCGCCGCCGCGCGCGAGCAGCTATGGATGCACCGCAAGGCTCATAAGCGCGCGCTGCTGGTGCTGGAAGGCC ATTACAGCATGGATGGCGATATTCCCGACCTCGCGGCCTTCGTGGCCCTGGCGCGGGAATTCGACTGCATGTCGCTGGTG GATGAAGCCCATTCGACCGGCGTGCTGGGCGCGGGCGGGCACGGCATTGCCGAACAGGCCGGCGTTGCACCGGATTCGGT CGACCTGTGGATGGGGACCCTCAGCAAAAGCCTGGTATCCTGCGGCGGATACATCGCCGGGCGCGCGGATGTCATTACCT ACCTCAAGCGTACGGCCGCCGGATTCGTCTATTCCGTCGGCCTGCCGCCGCCCGGCGCCGCCGCCTCGCTGGCCGCACTG GACATCATACGCGAGGAACCGTGGCGCATCGCGCGCCTGCGCGAAAACTCGGTCCATCTTCTGCGTCTTTTCCAGGATGC GGGGTTCGATACCGGCAGTTCCGCCGGCTACGGCATCGTGCCGCTGGTCACCGGCAGTTCGGTGACGGCCGGTCGCCTGT CGCAGGCCGTATTCGAACAGGGCATCAACGTCCAGCCGATCATCCATCCCGCGGTGCCAGAACGGGCTGCGCGCCTGCGC TTCTTCGTCAGCGCATCGCACACGACCGATCAGATCGAAACGACGGCGGCGGTTCTCGTGCGGGAATTGCAGGCCCTGTC GGAATAG
Upstream 100 bases:
>100_bases CGGACGAGGCCGTGCTGGACCGCCATCTGTCCGCCGAGGAACGGCAGGCCGCCTCGGCGTCGTCCGAACCCGTCTCCCAG AACAATGAAGAACTGACCAC
Downstream 100 bases:
>100_bases GCGGACAGGATCCGCCGAACCGATCCCTCGACCGCCAGCGCCCGTCCTTCGGGGGTGAAGAAATCACCCTCGACCAGCAC CTCCTGGATCAGCATGCGGC
Product: 2-amino-3-ketobutyrate coenzyme A ligase
Products: NA
Alternate protein names: AONS/AKB ligase; 7-keto-8-amino-pelargonic acid synthase; 7-KAP synthase; KAPA synthase; 8-amino-7-ketopelargonate synthase; Alpha-oxoamine synthase; L-alanine--pimeloyl-CoA ligase [H]
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTGPKFGRRLGERIKLLASLSGAAPAQTGSRGWSLPGVEEMEFMAKRAAALGIADPFFRQHDGLDGATTSIDGRSYINFS SYDYLGLNGDPRIIARVEDALRKYGTTVSASRMVSGERPFHRELEHALAEWHGAEDCVVMVSGHATNVTTLAQLMRPGDL IVHDALAHNSLIQGAILSGARRVAFAHNDVAAAREQLWMHRKAHKRALLVLEGHYSMDGDIPDLAAFVALAREFDCMSLV DEAHSTGVLGAGGHGIAEQAGVAPDSVDLWMGTLSKSLVSCGGYIAGRADVITYLKRTAAGFVYSVGLPPPGAAASLAAL DIIREEPWRIARLRENSVHLLRLFQDAGFDTGSSAGYGIVPLVTGSSVTAGRLSQAVFEQGINVQPIIHPAVPERAARLR FFVSASHTTDQIETTAAVLVRELQALSE
Sequences:
>Translated_428_residues MTGPKFGRRLGERIKLLASLSGAAPAQTGSRGWSLPGVEEMEFMAKRAAALGIADPFFRQHDGLDGATTSIDGRSYINFS SYDYLGLNGDPRIIARVEDALRKYGTTVSASRMVSGERPFHRELEHALAEWHGAEDCVVMVSGHATNVTTLAQLMRPGDL IVHDALAHNSLIQGAILSGARRVAFAHNDVAAAREQLWMHRKAHKRALLVLEGHYSMDGDIPDLAAFVALAREFDCMSLV DEAHSTGVLGAGGHGIAEQAGVAPDSVDLWMGTLSKSLVSCGGYIAGRADVITYLKRTAAGFVYSVGLPPPGAAASLAAL DIIREEPWRIARLRENSVHLLRLFQDAGFDTGSSAGYGIVPLVTGSSVTAGRLSQAVFEQGINVQPIIHPAVPERAARLR FFVSASHTTDQIETTAAVLVRELQALSE >Mature_427_residues TGPKFGRRLGERIKLLASLSGAAPAQTGSRGWSLPGVEEMEFMAKRAAALGIADPFFRQHDGLDGATTSIDGRSYINFSS YDYLGLNGDPRIIARVEDALRKYGTTVSASRMVSGERPFHRELEHALAEWHGAEDCVVMVSGHATNVTTLAQLMRPGDLI VHDALAHNSLIQGAILSGARRVAFAHNDVAAAREQLWMHRKAHKRALLVLEGHYSMDGDIPDLAAFVALAREFDCMSLVD EAHSTGVLGAGGHGIAEQAGVAPDSVDLWMGTLSKSLVSCGGYIAGRADVITYLKRTAAGFVYSVGLPPPGAAASLAALD IIREEPWRIARLRENSVHLLRLFQDAGFDTGSSAGYGIVPLVTGSSVTAGRLSQAVFEQGINVQPIIHPAVPERAARLRF FVSASHTTDQIETTAAVLVRELQALSE
Specific function: Catalyzes the decarboxylative condensation of pimeloyl- CoA and L-alanine to produce 8-amino-7-oxononanoate (AON), coenzyme A and/or converts 2-amino-3-ketobutyrate to glycine and acetyl-CoA [H]
COG id: COG0156
COG function: function code H; 7-keto-8-aminopelargonate synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI119220554, Length=361, Percent_Identity=33.7950138504155, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI4758668, Length=356, Percent_Identity=32.3033707865169, Blast_Score=177, Evalue=1e-44, Organism=Homo sapiens, GI7657118, Length=358, Percent_Identity=31.0055865921788, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI284448556, Length=345, Percent_Identity=31.0144927536232, Blast_Score=172, Evalue=5e-43, Organism=Homo sapiens, GI83977444, Length=342, Percent_Identity=30.7017543859649, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI83977442, Length=342, Percent_Identity=30.7017543859649, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI83977440, Length=342, Percent_Identity=30.7017543859649, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI4502025, Length=348, Percent_Identity=32.183908045977, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI40316939, Length=348, Percent_Identity=32.183908045977, Blast_Score=155, Evalue=8e-38, Organism=Homo sapiens, GI5454084, Length=381, Percent_Identity=28.6089238845144, Blast_Score=141, Evalue=2e-33, Organism=Escherichia coli, GI1790046, Length=355, Percent_Identity=32.9577464788732, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1786993, Length=352, Percent_Identity=34.9431818181818, Blast_Score=159, Evalue=2e-40, Organism=Caenorhabditis elegans, GI32566772, Length=355, Percent_Identity=33.8028169014084, Blast_Score=204, Evalue=8e-53, Organism=Caenorhabditis elegans, GI71994529, Length=355, Percent_Identity=30.7042253521127, Blast_Score=181, Evalue=9e-46, Organism=Caenorhabditis elegans, GI17560914, Length=410, Percent_Identity=29.0243902439024, Blast_Score=168, Evalue=4e-42, Organism=Caenorhabditis elegans, GI17560912, Length=410, Percent_Identity=29.0243902439024, Blast_Score=168, Evalue=5e-42, Organism=Caenorhabditis elegans, GI71982625, Length=295, Percent_Identity=31.1864406779661, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI71982617, Length=295, Percent_Identity=31.1864406779661, Blast_Score=145, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6320267, Length=352, Percent_Identity=30.6818181818182, Blast_Score=163, Evalue=4e-41, Organism=Saccharomyces cerevisiae, GI6320438, Length=358, Percent_Identity=28.2122905027933, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6323954, Length=242, Percent_Identity=24.7933884297521, Blast_Score=83, Evalue=8e-17, Organism=Drosophila melanogaster, GI24662918, Length=341, Percent_Identity=31.9648093841642, Blast_Score=194, Evalue=8e-50, Organism=Drosophila melanogaster, GI17137420, Length=355, Percent_Identity=31.5492957746479, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI17136286, Length=353, Percent_Identity=30.3116147308782, Blast_Score=157, Evalue=1e-38, Organism=Drosophila melanogaster, GI24653280, Length=288, Percent_Identity=30.9027777777778, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24653276, Length=288, Percent_Identity=30.9027777777778, Blast_Score=140, Evalue=1e-33, Organism=Drosophila melanogaster, GI24653278, Length=288, Percent_Identity=30.9027777777778, Blast_Score=140, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR004723 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.3.1.29; =2.3.1.47 [H]
Molecular weight: Translated: 45783; Mature: 45651
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPKFGRRLGERIKLLASLSGAAPAQTGSRGWSLPGVEEMEFMAKRAAALGIADPFFRQ CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH HDGLDGATTSIDGRSYINFSSYDYLGLNGDPRIIARVEDALRKYGTTVSASRMVSGERPF CCCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCH HRELEHALAEWHGAEDCVVMVSGHATNVTTLAQLMRPGDLIVHDALAHNSLIQGAILSGA HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC RRVAFAHNDVAAAREQLWMHRKAHKRALLVLEGHYSMDGDIPDLAAFVALAREFDCMSLV HHEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHH DEAHSTGVLGAGGHGIAEQAGVAPDSVDLWMGTLSKSLVSCGGYIAGRADVITYLKRTAA HHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GFVYSVGLPPPGAAASLAALDIIREEPWRIARLRENSVHLLRLFQDAGFDTGSSAGYGIV CEEEECCCCCCCHHHHHHHHHHHHCCCHHEEHHCCCCHHHHHHHHHCCCCCCCCCCCCEE PLVTGSSVTAGRLSQAVFEQGINVQPIIHPAVPERAARLRFFVSASHTTDQIETTAAVLV EEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHEEEEEECCCCHHHHHHHHHHHH RELQALSE HHHHHHCC >Mature Secondary Structure TGPKFGRRLGERIKLLASLSGAAPAQTGSRGWSLPGVEEMEFMAKRAAALGIADPFFRQ CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHH HDGLDGATTSIDGRSYINFSSYDYLGLNGDPRIIARVEDALRKYGTTVSASRMVSGERPF CCCCCCCCCCCCCCCEEEECCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHCCCCCH HRELEHALAEWHGAEDCVVMVSGHATNVTTLAQLMRPGDLIVHDALAHNSLIQGAILSGA HHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCC RRVAFAHNDVAAAREQLWMHRKAHKRALLVLEGHYSMDGDIPDLAAFVALAREFDCMSLV HHEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHH DEAHSTGVLGAGGHGIAEQAGVAPDSVDLWMGTLSKSLVSCGGYIAGRADVITYLKRTAA HHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC GFVYSVGLPPPGAAASLAALDIIREEPWRIARLRENSVHLLRLFQDAGFDTGSSAGYGIV CEEEECCCCCCCHHHHHHHHHHHHCCCHHEEHHCCCCHHHHHHHHHCCCCCCCCCCCCEE PLVTGSSVTAGRLSQAVFEQGINVQPIIHPAVPERAARLRFFVSASHTTDQIETTAAVLV EEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCHHHHHEEEEEECCCCHHHHHHHHHHHH RELQALSE HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA