| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is pgk [H]
Identifier: 162148086
GI number: 162148086
Start: 2366024
End: 2367247
Strand: Direct
Name: pgk [H]
Synonym: GDI_2303
Alternate gene names: 162148086
Gene position: 2366024-2367247 (Clockwise)
Preceding gene: 162148085
Following gene: 162148091
Centisome position: 59.99
GC content: 69.04
Gene sequence:
>1224_bases ATGGCGGCGCTGTCTTTCAAGACGCTGGATGCGCTCCAGCCCAAAGGACGCAAGGTCCTGCTGCGCGCGGACCTGAACGT GCCCGTCCGCGACGGGAAGATCACGGACCTGACGCGCATCGAGCGCCTGGCCCCCACCATCCGCGAACTGGCGGACAAGG GCGCGCGCGTGATCGTCGTCAGCCATTTCGACCGCCCGAAGGGCCAGCGGGTGCCGGAGATGTCGCTGGCGCCGATCGCG GCCGCCCTGGGCACGACGCTGGGCCGTCCGGTGCAGTTCGCCGACGACTGCATCGGCCCGGTGGCCGAGGAAGCCGTTTC CAAGCTCCAGGACGGCGACGTCCTGGTGCTGGAAAACACGCGCTTCCATGCCGGCGAGGAAAAGAACGACCCCGACCTGT CCAAGGCGCTGGCCGCACTGGCGGATGACTACGTCAACGACGCGTTTTCCGCCGCCCATCGCGCCCATGCCTCGACCGAG GGCGTCGCCCGCTTCCTGCCGTCCTTCGCCGGGCGGCTGATGGAGGCGGAACTGAACGCCCTGAACGTCGCGCTGGAAAA CCCGGTCCGTCCGGTCGGCGCGATCGTCGGCGGCGCCAAGATCTCCACCAAGCTGGACCTGATCGGCAACCTGCTGGACA AGGTCGACGTGCTGATCATCGGCGGCGCGATGGCCAACACGTTCCTGGCGGCCAACGGGGTGCGGGTCGGCAAGTCGCTG CAGGAAGCGGACATGCACGACACGGCGCGCGCGATCATGGCCAAGGCCGAGGAACGCGGGTGCGAGATCGTGCTGCCGGT CGATGCGGTGACGGCGACGGAATTCCGGGCCGATCCGCCGACCAGAACGGTGCCGATCGACGAGATCCCGGCGGATGCGA TGATGCTGGATGCGGGGCCCGAGACGGTCACCCTGCTGATCCAGAAGATCGTGGGCCTGAAGACCCTGGTCTGGAACGGC CCGCTGGGCGCGTTCGAACTGCATCCCTTCGACACCGCCACCAACCTGGTCGCGGCGGAAGTCGCGCGGCGGACCCAGGC CGGCCAGTTGACCAGCGTCGCGGGCGGCGGGGACACGGTGTCCGCGCTGCGCCATGCCGGCGTGGCGGACGAAATGTCCT ATACCTCGACCGCCGGCGGCGCGTTCCTGGAATGGCTGGAGGGCAAGGTTCTCCCGGGCATCCAGGCGCTGGGCGAAGTC TCCGGGCGGATCCTGCCGCTCTGA
Upstream 100 bases:
>100_bases TCGATGGCGGCAAGCTGGTCCGGGTGTGCAGCTGGTACGACAATGAATGGGGCTTTTCCAACCGCATGTCCGATACCGCA GCGCTGTTCGGATCTCTGTG
Downstream 100 bases:
>100_bases CGGAACGGGACGGTTCCCGGCGTCAGGCCGGGCCGTCCTCCTTTTCCTCCGTCGCCTCCCCGCCCTCTCGCGGGGTCAGG CGCACGGAATCCCCGACCAG
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 407; Mature: 406
Protein sequence:
>407_residues MAALSFKTLDALQPKGRKVLLRADLNVPVRDGKITDLTRIERLAPTIRELADKGARVIVVSHFDRPKGQRVPEMSLAPIA AALGTTLGRPVQFADDCIGPVAEEAVSKLQDGDVLVLENTRFHAGEEKNDPDLSKALAALADDYVNDAFSAAHRAHASTE GVARFLPSFAGRLMEAELNALNVALENPVRPVGAIVGGAKISTKLDLIGNLLDKVDVLIIGGAMANTFLAANGVRVGKSL QEADMHDTARAIMAKAEERGCEIVLPVDAVTATEFRADPPTRTVPIDEIPADAMMLDAGPETVTLLIQKIVGLKTLVWNG PLGAFELHPFDTATNLVAAEVARRTQAGQLTSVAGGGDTVSALRHAGVADEMSYTSTAGGAFLEWLEGKVLPGIQALGEV SGRILPL
Sequences:
>Translated_407_residues MAALSFKTLDALQPKGRKVLLRADLNVPVRDGKITDLTRIERLAPTIRELADKGARVIVVSHFDRPKGQRVPEMSLAPIA AALGTTLGRPVQFADDCIGPVAEEAVSKLQDGDVLVLENTRFHAGEEKNDPDLSKALAALADDYVNDAFSAAHRAHASTE GVARFLPSFAGRLMEAELNALNVALENPVRPVGAIVGGAKISTKLDLIGNLLDKVDVLIIGGAMANTFLAANGVRVGKSL QEADMHDTARAIMAKAEERGCEIVLPVDAVTATEFRADPPTRTVPIDEIPADAMMLDAGPETVTLLIQKIVGLKTLVWNG PLGAFELHPFDTATNLVAAEVARRTQAGQLTSVAGGGDTVSALRHAGVADEMSYTSTAGGAFLEWLEGKVLPGIQALGEV SGRILPL >Mature_406_residues AALSFKTLDALQPKGRKVLLRADLNVPVRDGKITDLTRIERLAPTIRELADKGARVIVVSHFDRPKGQRVPEMSLAPIAA ALGTTLGRPVQFADDCIGPVAEEAVSKLQDGDVLVLENTRFHAGEEKNDPDLSKALAALADDYVNDAFSAAHRAHASTEG VARFLPSFAGRLMEAELNALNVALENPVRPVGAIVGGAKISTKLDLIGNLLDKVDVLIIGGAMANTFLAANGVRVGKSLQ EADMHDTARAIMAKAEERGCEIVLPVDAVTATEFRADPPTRTVPIDEIPADAMMLDAGPETVTLLIQKIVGLKTLVWNGP LGAFELHPFDTATNLVAAEVARRTQAGQLTSVAGGGDTVSALRHAGVADEMSYTSTAGGAFLEWLEGKVLPGIQALGEVS GRILPL
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4505763, Length=413, Percent_Identity=43.0992736077482, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI31543397, Length=413, Percent_Identity=42.3728813559322, Blast_Score=295, Evalue=4e-80, Organism=Escherichia coli, GI1789294, Length=386, Percent_Identity=44.8186528497409, Blast_Score=307, Evalue=8e-85, Organism=Caenorhabditis elegans, GI17508823, Length=415, Percent_Identity=42.8915662650602, Blast_Score=308, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6319857, Length=416, Percent_Identity=43.75, Blast_Score=293, Evalue=4e-80, Organism=Drosophila melanogaster, GI24581203, Length=416, Percent_Identity=40.8653846153846, Blast_Score=275, Evalue=3e-74, Organism=Drosophila melanogaster, GI17136394, Length=408, Percent_Identity=39.9509803921569, Blast_Score=262, Evalue=4e-70,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 42929; Mature: 42798
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALSFKTLDALQPKGRKVLLRADLNVPVRDGKITDLTRIERLAPTIRELADKGARVIVV CCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE SHFDRPKGQRVPEMSLAPIAAALGTTLGRPVQFADDCIGPVAEEAVSKLQDGDVLVLENT EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECC RFHAGEEKNDPDLSKALAALADDYVNDAFSAAHRAHASTEGVARFLPSFAGRLMEAELNA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LNVALENPVRPVGAIVGGAKISTKLDLIGNLLDKVDVLIIGGAMANTFLAANGVRVGKSL HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHCCCCHHCCHH QEADMHDTARAIMAKAEERGCEIVLPVDAVTATEFRADPPTRTVPIDEIPADAMMLDAGP HHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHCCCCCCCCCCCCCCCCCEEEECCCC ETVTLLIQKIVGLKTLVWNGPLGAFELHPFDTATNLVAAEVARRTQAGQLTSVAGGGDTV HHHHHHHHHHHHHHHEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHH SALRHAGVADEMSYTSTAGGAFLEWLEGKVLPGIQALGEVSGRILPL HHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCC >Mature Secondary Structure AALSFKTLDALQPKGRKVLLRADLNVPVRDGKITDLTRIERLAPTIRELADKGARVIVV CCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE SHFDRPKGQRVPEMSLAPIAAALGTTLGRPVQFADDCIGPVAEEAVSKLQDGDVLVLENT EECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECC RFHAGEEKNDPDLSKALAALADDYVNDAFSAAHRAHASTEGVARFLPSFAGRLMEAELNA EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LNVALENPVRPVGAIVGGAKISTKLDLIGNLLDKVDVLIIGGAMANTFLAANGVRVGKSL HHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHCCCCHHCCHH QEADMHDTARAIMAKAEERGCEIVLPVDAVTATEFRADPPTRTVPIDEIPADAMMLDAGP HHHHHHHHHHHHHHHHHHCCCEEEEECCCEEHHHHCCCCCCCCCCCCCCCCCEEEECCCC ETVTLLIQKIVGLKTLVWNGPLGAFELHPFDTATNLVAAEVARRTQAGQLTSVAGGGDTV HHHHHHHHHHHHHHHEEECCCCCCEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHH SALRHAGVADEMSYTSTAGGAFLEWLEGKVLPGIQALGEVSGRILPL HHHHHCCCHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA