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The map label for this gene is nahR [H]

Identifier: 162148025

GI number: 162148025

Start: 2298471

End: 2299397

Strand: Reverse

Name: nahR [H]

Synonym: GDI_2241

Alternate gene names: 162148025

Gene position: 2299397-2298471 (Counterclockwise)

Preceding gene: 162148028

Following gene: 162148024

Centisome position: 58.3

GC content: 66.34

Gene sequence:

>927_bases
ATGCCGCGCCAATACGACCTCGATCTGCTGCGCTATCTCCATGTGCTGGTGGAAGAACAGAGCGTTTCCGCCGCCGCGCG
GCGCATGAAGGTCAGCGAGCCGACCATGAGCCGCCAGTTGGGCAAGCTGCGCGAGGCCTTCGGCGACCCGATTCTGGTGC
AGTCGGGGCGGCGGATGGTCCCGACCGCCTTCGCCACGCGCATCCGTGAAAAAGTCGGGCAACTGGTGCTGGATGCCGAA
CGGCTGCACGAGGATCGTGAAAAGCTGGACCTGACGACCGTTTCGCCGCGTTTCACCATTCGCGCCAGCGACGTGATCGT
CGGCGCCTTCGCCAGCGAACTGGTCCAGGTGCTGCGGCGGGACTGTCCGCAGTGCGACGTCTGCTTCACCCCCGAAACCG
ACGAGCATGTCGGGGACGCGATGCGCCGCCAGACCATCGACCTGTATATCGGCGCGACCGACGAGATGCGTCCCGAACTG
CGCCGGCAGAGCCTGTTCGCCATGTCGATCCGGGGGATGGTGCGGCGGGGACATCCGATCCTGGCCGAGGGCGTCACGCC
GCAGAACCTGGTCCGCTACGATCATATCGGCGTGTCGCGCAAGGGCCTGCGGCGCGGCCCGATCGATACGATCCTGCAGG
AACGCTACGGCCTGCGGCGGCGCGTCGTGCTGGTGGTGCCGTCCCATTTCGCGATGATCGAAAGTATTCGCGAGACGGAC
ATGATCCTGCCCATGCCCGACATCGTGATCGACCGGTTGCCGACCAAGCTGATCCGCCTGGTCGCGTTCGACTTTCCCTT
TGCCCTGCAACCGGTCGAGGCCTTCCAGGCCTGGCACCCCCGCCACGATTTCGATCCGGTGCATCGTTGGCTGCGCGACA
CGGTCTTCCGCATCACCCGGCGGCGGGCGGCCCAGCCTGCCGCCTGA

Upstream 100 bases:

>100_bases
CGCATGCGCATCCCCACAGTATCGCGAGTCGACGATTTCAGTTTTCGCCTGGGTCGGGCAATATCGTTTCGTCCCGGGAA
AATCGACGGCTGGGGGGCCG

Downstream 100 bases:

>100_bases
TCGTCGCCGCCGGGAACCAAACCGGCAGGGCCGCGGCGCGTTGTGGATGCAGCCCCCTGCGGGGCTCCAGCCCAGCGGAG
GGCAAGCATGACATGGTCGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MPRQYDLDLLRYLHVLVEEQSVSAAARRMKVSEPTMSRQLGKLREAFGDPILVQSGRRMVPTAFATRIREKVGQLVLDAE
RLHEDREKLDLTTVSPRFTIRASDVIVGAFASELVQVLRRDCPQCDVCFTPETDEHVGDAMRRQTIDLYIGATDEMRPEL
RRQSLFAMSIRGMVRRGHPILAEGVTPQNLVRYDHIGVSRKGLRRGPIDTILQERYGLRRRVVLVVPSHFAMIESIRETD
MILPMPDIVIDRLPTKLIRLVAFDFPFALQPVEAFQAWHPRHDFDPVHRWLRDTVFRITRRRAAQPAA

Sequences:

>Translated_308_residues
MPRQYDLDLLRYLHVLVEEQSVSAAARRMKVSEPTMSRQLGKLREAFGDPILVQSGRRMVPTAFATRIREKVGQLVLDAE
RLHEDREKLDLTTVSPRFTIRASDVIVGAFASELVQVLRRDCPQCDVCFTPETDEHVGDAMRRQTIDLYIGATDEMRPEL
RRQSLFAMSIRGMVRRGHPILAEGVTPQNLVRYDHIGVSRKGLRRGPIDTILQERYGLRRRVVLVVPSHFAMIESIRETD
MILPMPDIVIDRLPTKLIRLVAFDFPFALQPVEAFQAWHPRHDFDPVHRWLRDTVFRITRRRAAQPAA
>Mature_307_residues
PRQYDLDLLRYLHVLVEEQSVSAAARRMKVSEPTMSRQLGKLREAFGDPILVQSGRRMVPTAFATRIREKVGQLVLDAER
LHEDREKLDLTTVSPRFTIRASDVIVGAFASELVQVLRRDCPQCDVCFTPETDEHVGDAMRRQTIDLYIGATDEMRPELR
RQSLFAMSIRGMVRRGHPILAEGVTPQNLVRYDHIGVSRKGLRRGPIDTILQERYGLRRRVVLVVPSHFAMIESIRETDM
ILPMPDIVIDRLPTKLIRLVAFDFPFALQPVEAFQAWHPRHDFDPVHRWLRDTVFRITRRRAAQPAA

Specific function: Regulates the expression of the naphthalene (nahA-F) and salicylate (nahG-M) metabolism genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081684, Length=307, Percent_Identity=19.8697068403909, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1790147, Length=305, Percent_Identity=24.5901639344262, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 35533; Mature: 35402

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQYDLDLLRYLHVLVEEQSVSAAARRMKVSEPTMSRQLGKLREAFGDPILVQSGRRMV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
PTAFATRIREKVGQLVLDAERLHEDREKLDLTTVSPRFTIRASDVIVGAFASELVQVLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHH
DCPQCDVCFTPETDEHVGDAMRRQTIDLYIGATDEMRPELRRQSLFAMSIRGMVRRGHPI
CCCCCCEEECCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LAEGVTPQNLVRYDHIGVSRKGLRRGPIDTILQERYGLRRRVVLVVPSHFAMIESIRETD
EECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC
MILPMPDIVIDRLPTKLIRLVAFDFPFALQPVEAFQAWHPRHDFDPVHRWLRDTVFRITR
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RRAAQPAA
HHCCCCCC
>Mature Secondary Structure 
PRQYDLDLLRYLHVLVEEQSVSAAARRMKVSEPTMSRQLGKLREAFGDPILVQSGRRMV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCCCCCC
PTAFATRIREKVGQLVLDAERLHEDREKLDLTTVSPRFTIRASDVIVGAFASELVQVLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEEEEHHHHHHHHHHHHHHHHHH
DCPQCDVCFTPETDEHVGDAMRRQTIDLYIGATDEMRPELRRQSLFAMSIRGMVRRGHPI
CCCCCCEEECCCCHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
LAEGVTPQNLVRYDHIGVSRKGLRRGPIDTILQERYGLRRRVVLVVPSHFAMIESIRETD
EECCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC
MILPMPDIVIDRLPTKLIRLVAFDFPFALQPVEAFQAWHPRHDFDPVHRWLRDTVFRITR
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RRAAQPAA
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2703465; 2848005 [H]