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The map label for this gene is ygcL [C]

Identifier: 162147993

GI number: 162147993

Start: 2259600

End: 2261255

Strand: Reverse

Name: ygcL [C]

Synonym: GDI_2209

Alternate gene names: 162147993

Gene position: 2261255-2259600 (Counterclockwise)

Preceding gene: 162147994

Following gene: 162147992

Centisome position: 57.33

GC content: 65.16

Gene sequence:

>1656_bases
ATGAGATCGTTTCCCATGAATCTTCTGACCGCTTCATGGCTGCCCATTCGCCGGAAATCCGGCGCGGCGGAGACCATTCG
TCCGGCGCAGATCGTGGACCGCGTGGCCGACGATCCGATCATGGCGCTCGATTGGCCACGGGCGGATTTCCGCATCGCGT
CCCTTGAATTCCTGATCGGATTGCTGGCAACGGCGTTTCCGCCCAAAAACGAGGATATCTGGTGCGAAACCTGGGAAGAC
CCACCTTCCGTGGAGGCGCTGGACGAAGCCTTCGCCCCTGTGGCCGAAGCCTTCTGGCTCGATGGGCCGGGGCCACGCTT
CCTGCAGGACCTGGAAAATCTCCAGAGCGGCCAGGAGCCTGTGGAACGTCTGCTGATCGATGCGCCTGGCGATAGCACCG
TAAAGAAGAACACGGATCTGTTCGTGCATCGGCAGCGGATCATGGCGCTGGGGCGTCCGGCCGCCTGCATGGCCCTGTTT
ACCCTCCAGTCCTGGGCGCCGAGCGGCGGTGCGGGAAACATGACCGGCCTGCGGGGCGGCGGCCCCCTGGTCACGCTGGT
CCTGCCCCGGGAGGGAGCGAGCCTGTGGGAGATGGTATGGGCGAATACGCCCTTCGGGGTGCCTCCGTCCGAAGCAGACC
TGCCCCGTGTGTTCCCGTGGCTCGCGCCGACAATCGGGTCAGGCAAGGATGGAACCAGTGTACGCCCAGGCCATAACGCC
CATCCGCTGCAATGCTGGTGGGGAATGCCGCGGCGTATTCGCCTCGATTTCGAAGCGGCGGAGGACGGCATATGCGACCT
GACGGGGCAGCCGGATGCCGTTCTGGTACCGGGCTGGCGACAGCGTCCTTATGGCGCAAGCTACGCCGACTGGACAGGGA
TGCCCTATGGCGCGGGCGCATCCATCCACCCGTTGACGCCCCGTTATCGCCAGAAGAAAGACGCCGAATGGCTGAGCGTC
CACCCGCAGCCGGGTGGAATCGGATACCGCCATTGGGCCGGGATTGTCGTGAACAGCAGCGATACGCACCGGCTTCCGGC
AAGCACGGTGCTGTCATGGCGTAACGACCGGGCCCGGAACGTTGCCGCCTCGCTCACGCCTCGGCTTCTGGCGGCCGGTT
ATGACATGGACAATATGAAGGCCCGCAGCTTCGTCGAGAGCGAGATGCCGCTGCCCGGCGTGGTCGATCCGGTGCGTCAG
GAGGCGCTTGACGCACTGGCCCGAGCGTATGTCGAGGCCGCCGACCAAGTGGCGGGTATCCTCCGACAGTGTGTCCGGGA
GGCCCTGTTTGGCAAGGGGACCATCTCGCCAGATGCAACGCTGTTCTCCGGCCTGCGCGAACGGTTCTGGGCGCAGACGG
AGGGAACGTTCTTCGATCTTCTCCATCAGGCGGTGCTGCTGGGTGACGGAGATGACATCGATCTGCGGCGCATCTGGCTG
CGCGCCCTTCGGCGGGTGGCCCTGGACCTGTTCGACTCCGCCGTCATGCTGACTCCGGACACGGGAACGACCGAGGCGCA
ACGATCCGCGCTGGCGCGCCGGCGGCTCGGGGCGGCTGTCGCGGGCGGTGGAAAGGAAGGGCAGGCGCTCATGATGGTTC
TGAAAATTCCCGTGCCCGTTACACGGAAAGCGACGTCCAGGATGAAGCAGCCATGA

Upstream 100 bases:

>100_bases
TTCGCCGGCATTGCCGGTACCTCGAACGTCACTGGCGCCGGACCTGGCCGTCTGGCGCCAGCGACAAAGTAAAAGTTTTG
CCTTTATCTGGCTACGCTAA

Downstream 100 bases:

>100_bases
CCGGAGATGACCGAAACGCGATTGCCGAAAAGGCGCGGAACTGGTGGCGCGAATTGCAGCCGGACCCCGGCGGACGGCCG
GGCGACCGCGGGACGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cse1 Family Protein; Cse1 Family CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein; Crispr-Associated Protein Cse1 Family

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MRSFPMNLLTASWLPIRRKSGAAETIRPAQIVDRVADDPIMALDWPRADFRIASLEFLIGLLATAFPPKNEDIWCETWED
PPSVEALDEAFAPVAEAFWLDGPGPRFLQDLENLQSGQEPVERLLIDAPGDSTVKKNTDLFVHRQRIMALGRPAACMALF
TLQSWAPSGGAGNMTGLRGGGPLVTLVLPREGASLWEMVWANTPFGVPPSEADLPRVFPWLAPTIGSGKDGTSVRPGHNA
HPLQCWWGMPRRIRLDFEAAEDGICDLTGQPDAVLVPGWRQRPYGASYADWTGMPYGAGASIHPLTPRYRQKKDAEWLSV
HPQPGGIGYRHWAGIVVNSSDTHRLPASTVLSWRNDRARNVAASLTPRLLAAGYDMDNMKARSFVESEMPLPGVVDPVRQ
EALDALARAYVEAADQVAGILRQCVREALFGKGTISPDATLFSGLRERFWAQTEGTFFDLLHQAVLLGDGDDIDLRRIWL
RALRRVALDLFDSAVMLTPDTGTTEAQRSALARRRLGAAVAGGGKEGQALMMVLKIPVPVTRKATSRMKQP

Sequences:

>Translated_551_residues
MRSFPMNLLTASWLPIRRKSGAAETIRPAQIVDRVADDPIMALDWPRADFRIASLEFLIGLLATAFPPKNEDIWCETWED
PPSVEALDEAFAPVAEAFWLDGPGPRFLQDLENLQSGQEPVERLLIDAPGDSTVKKNTDLFVHRQRIMALGRPAACMALF
TLQSWAPSGGAGNMTGLRGGGPLVTLVLPREGASLWEMVWANTPFGVPPSEADLPRVFPWLAPTIGSGKDGTSVRPGHNA
HPLQCWWGMPRRIRLDFEAAEDGICDLTGQPDAVLVPGWRQRPYGASYADWTGMPYGAGASIHPLTPRYRQKKDAEWLSV
HPQPGGIGYRHWAGIVVNSSDTHRLPASTVLSWRNDRARNVAASLTPRLLAAGYDMDNMKARSFVESEMPLPGVVDPVRQ
EALDALARAYVEAADQVAGILRQCVREALFGKGTISPDATLFSGLRERFWAQTEGTFFDLLHQAVLLGDGDDIDLRRIWL
RALRRVALDLFDSAVMLTPDTGTTEAQRSALARRRLGAAVAGGGKEGQALMMVLKIPVPVTRKATSRMKQP
>Mature_551_residues
MRSFPMNLLTASWLPIRRKSGAAETIRPAQIVDRVADDPIMALDWPRADFRIASLEFLIGLLATAFPPKNEDIWCETWED
PPSVEALDEAFAPVAEAFWLDGPGPRFLQDLENLQSGQEPVERLLIDAPGDSTVKKNTDLFVHRQRIMALGRPAACMALF
TLQSWAPSGGAGNMTGLRGGGPLVTLVLPREGASLWEMVWANTPFGVPPSEADLPRVFPWLAPTIGSGKDGTSVRPGHNA
HPLQCWWGMPRRIRLDFEAAEDGICDLTGQPDAVLVPGWRQRPYGASYADWTGMPYGAGASIHPLTPRYRQKKDAEWLSV
HPQPGGIGYRHWAGIVVNSSDTHRLPASTVLSWRNDRARNVAASLTPRLLAAGYDMDNMKARSFVESEMPLPGVVDPVRQ
EALDALARAYVEAADQVAGILRQCVREALFGKGTISPDATLFSGLRERFWAQTEGTFFDLLHQAVLLGDGDDIDLRRIWL
RALRRVALDLFDSAVMLTPDTGTTEAQRSALARRRLGAAVAGGGKEGQALMMVLKIPVPVTRKATSRMKQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60471; Mature: 60471

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFPMNLLTASWLPIRRKSGAAETIRPAQIVDRVADDPIMALDWPRADFRIASLEFLIG
CCCCCCHHHHHCCCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHH
LLATAFPPKNEDIWCETWEDPPSVEALDEAFAPVAEAFWLDGPGPRFLQDLENLQSGQEP
HHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHH
VERLLIDAPGDSTVKKNTDLFVHRQRIMALGRPAACMALFTLQSWAPSGGAGNMTGLRGG
HHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GPLVTLVLPREGASLWEMVWANTPFGVPPSEADLPRVFPWLAPTIGSGKDGTSVRPGHNA
CCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
HPLQCWWGMPRRIRLDFEAAEDGICDLTGQPDAVLVPGWRQRPYGASYADWTGMPYGAGA
CCCHHCCCCCCEEEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
SIHPLTPRYRQKKDAEWLSVHPQPGGIGYRHWAGIVVNSSDTHRLPASTVLSWRNDRARN
CCCCCCCHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCHHHH
VAASLTPRLLAAGYDMDNMKARSFVESEMPLPGVVDPVRQEALDALARAYVEAADQVAGI
HHHHHCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRQCVREALFGKGTISPDATLFSGLRERFWAQTEGTFFDLLHQAVLLGDGDDIDLRRIWL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
RALRRVALDLFDSAVMLTPDTGTTEAQRSALARRRLGAAVAGGGKEGQALMMVLKIPVPV
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
TRKATSRMKQP
CHHHHHHCCCC
>Mature Secondary Structure
MRSFPMNLLTASWLPIRRKSGAAETIRPAQIVDRVADDPIMALDWPRADFRIASLEFLIG
CCCCCCHHHHHCCCCCCCCCCCCHHCCHHHHHHHHCCCCEEEEECCCCCEEHHHHHHHHH
LLATAFPPKNEDIWCETWEDPPSVEALDEAFAPVAEAFWLDGPGPRFLQDLENLQSGQEP
HHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHH
VERLLIDAPGDSTVKKNTDLFVHRQRIMALGRPAACMALFTLQSWAPSGGAGNMTGLRGG
HHHHEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
GPLVTLVLPREGASLWEMVWANTPFGVPPSEADLPRVFPWLAPTIGSGKDGTSVRPGHNA
CCEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
HPLQCWWGMPRRIRLDFEAAEDGICDLTGQPDAVLVPGWRQRPYGASYADWTGMPYGAGA
CCCHHCCCCCCEEEEEEECCCCCCEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
SIHPLTPRYRQKKDAEWLSVHPQPGGIGYRHWAGIVVNSSDTHRLPASTVLSWRNDRARN
CCCCCCCHHHHCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHCCCHHHH
VAASLTPRLLAAGYDMDNMKARSFVESEMPLPGVVDPVRQEALDALARAYVEAADQVAGI
HHHHHCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LRQCVREALFGKGTISPDATLFSGLRERFWAQTEGTFFDLLHQAVLLGDGDDIDLRRIWL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
RALRRVALDLFDSAVMLTPDTGTTEAQRSALARRRLGAAVAGGGKEGQALMMVLKIPVPV
HHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCC
TRKATSRMKQP
CHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA