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The map label for this gene is yvrE [H]

Identifier: 162147963

GI number: 162147963

Start: 2229736

End: 2230641

Strand: Reverse

Name: yvrE [H]

Synonym: GDI_2179

Alternate gene names: 162147963

Gene position: 2230641-2229736 (Counterclockwise)

Preceding gene: 162147965

Following gene: 162147959

Centisome position: 56.56

GC content: 67.66

Gene sequence:

>906_bases
ATGATGGGACCAATCTGCGGCGCGCCGCGATGCGTCTGGGATCTGCGGGCCACGCTGGGCGAGGGGCCCGTCTGGTCCGA
GGGCGAGCAGGCACTGTATTTCGTCGATATCGTCGGCCGGGCGATCCATCGCTACCGGCCGGAAAGCGGCGAGACGATGA
CGTGGCTTGCCCCGAATCGCCCCGGCTTCCTGGTGCCGTCGAACGACGGGACCTTCCTGTGCGGCCTGAAGGACGGGCTG
CACCGGTTCGACCCCGCCAGCGGACATTTCAGCCTGGACACGCTGGTGGAACCGGAATTGCCGGACAACCGCATCAATGA
CGGGCATGTGGACCGGTTCGGGCGCCTGTGGTTCGGCACGATGCACGACGCCGAAACCGATCCGACCGGATCGCTCTATT
CCGTCAGCCAGGACCAGGGACGGTTGCACGTCCATCGCGAGGACGAGGGATATATCGTCAGCAACGGCCCCGCGCTGTCG
CCCGACGGGCGGACGCTGTACCACAATCACTCGCCCGCCCGCACCGTCTATGCTTTCGATGTCGGGTCGGGCGGTGTGCT
GTCGAATCGCCGGGTCTTCGCGACGCTGCAGGATGGCTACCCGGACGGGATCGCGGTGGACAGCGCGGGCTTCCTGTGGA
TCGGGGTGTGGGGCCGCGGGCGGATCGAGCGCCTGGCCCCCGATGGCACGCCGGTCGATCCCATTCCGCTTCCCGCCCGC
AACGTCACCAAGGTCGCGTTCGGCGGGGCCGACTACCGCACCGTGTTCGTCACCACGGCGCGCAAGGGCCTGTCGCCCGA
GCAACTGGACGCGGAGCCCCTGACCGGCGGACTGTTCTCGTTCGGCACCAGCATTCCCGGACAGAAACAGGCGGTGTTCC
CGCTCGACCGGTCGATCGTGCTGTAA

Upstream 100 bases:

>100_bases
AGGATGCAGGCAGTCGGGTTCATGAACGTGCTCCCGGTTTGCAGTATGATGCCAATATGAACCGTACCGCCCGGCAGGGC
CAGAGAGGAGGAACGCGATG

Downstream 100 bases:

>100_bases
ACTTAAAGAAGGTCCCGCAGCAGGGGGATCAGCGGCAGGTCGGCCTCGGGCATCGGATAGTGCGACAGGTCGTCGGCCCG
GACCCAGGCCAGGGTCTGGC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MMGPICGAPRCVWDLRATLGEGPVWSEGEQALYFVDIVGRAIHRYRPESGETMTWLAPNRPGFLVPSNDGTFLCGLKDGL
HRFDPASGHFSLDTLVEPELPDNRINDGHVDRFGRLWFGTMHDAETDPTGSLYSVSQDQGRLHVHREDEGYIVSNGPALS
PDGRTLYHNHSPARTVYAFDVGSGGVLSNRRVFATLQDGYPDGIAVDSAGFLWIGVWGRGRIERLAPDGTPVDPIPLPAR
NVTKVAFGGADYRTVFVTTARKGLSPEQLDAEPLTGGLFSFGTSIPGQKQAVFPLDRSIVL

Sequences:

>Translated_301_residues
MMGPICGAPRCVWDLRATLGEGPVWSEGEQALYFVDIVGRAIHRYRPESGETMTWLAPNRPGFLVPSNDGTFLCGLKDGL
HRFDPASGHFSLDTLVEPELPDNRINDGHVDRFGRLWFGTMHDAETDPTGSLYSVSQDQGRLHVHREDEGYIVSNGPALS
PDGRTLYHNHSPARTVYAFDVGSGGVLSNRRVFATLQDGYPDGIAVDSAGFLWIGVWGRGRIERLAPDGTPVDPIPLPAR
NVTKVAFGGADYRTVFVTTARKGLSPEQLDAEPLTGGLFSFGTSIPGQKQAVFPLDRSIVL
>Mature_301_residues
MMGPICGAPRCVWDLRATLGEGPVWSEGEQALYFVDIVGRAIHRYRPESGETMTWLAPNRPGFLVPSNDGTFLCGLKDGL
HRFDPASGHFSLDTLVEPELPDNRINDGHVDRFGRLWFGTMHDAETDPTGSLYSVSQDQGRLHVHREDEGYIVSNGPALS
PDGRTLYHNHSPARTVYAFDVGSGGVLSNRRVFATLQDGYPDGIAVDSAGFLWIGVWGRGRIERLAPDGTPVDPIPLPAR
NVTKVAFGGADYRTVFVTTARKGLSPEQLDAEPLTGGLFSFGTSIPGQKQAVFPLDRSIVL

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=284, Percent_Identity=32.3943661971831, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI4759036, Length=284, Percent_Identity=32.3943661971831, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646912, Length=278, Percent_Identity=30.9352517985612, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24646910, Length=278, Percent_Identity=30.9352517985612, Blast_Score=102, Evalue=2e-22,
Organism=Drosophila melanogaster, GI45551448, Length=276, Percent_Identity=28.9855072463768, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24641471, Length=280, Percent_Identity=28.9285714285714, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI18860103, Length=280, Percent_Identity=28.9285714285714, Blast_Score=89, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24641469, Length=280, Percent_Identity=28.9285714285714, Blast_Score=89, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 32788; Mature: 32788

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGPICGAPRCVWDLRATLGEGPVWSEGEQALYFVDIVGRAIHRYRPESGETMTWLAPNR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCC
PGFLVPSNDGTFLCGLKDGLHRFDPASGHFSLDTLVEPELPDNRINDGHVDRFGRLWFGT
CCEEEECCCCCEEEECHHCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEEEE
MHDAETDPTGSLYSVSQDQGRLHVHREDEGYIVSNGPALSPDGRTLYHNHSPARTVYAFD
CCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCEECCCCCEEEECCCCCEEEEEEE
VGSGGVLSNRRVFATLQDGYPDGIAVDSAGFLWIGVWGRGRIERLAPDGTPVDPIPLPAR
CCCCCEECCCEEEEEECCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC
NVTKVAFGGADYRTVFVTTARKGLSPEQLDAEPLTGGLFSFGTSIPGQKQAVFPLDRSIV
CEEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCEEC
L
C
>Mature Secondary Structure
MMGPICGAPRCVWDLRATLGEGPVWSEGEQALYFVDIVGRAIHRYRPESGETMTWLAPNR
CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCEEEEECCCC
PGFLVPSNDGTFLCGLKDGLHRFDPASGHFSLDTLVEPELPDNRINDGHVDRFGRLWFGT
CCEEEECCCCCEEEECHHCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHEEEEE
MHDAETDPTGSLYSVSQDQGRLHVHREDEGYIVSNGPALSPDGRTLYHNHSPARTVYAFD
CCCCCCCCCCCEEEECCCCCEEEEEECCCCEEEECCCEECCCCCEEEECCCCCEEEEEEE
VGSGGVLSNRRVFATLQDGYPDGIAVDSAGFLWIGVWGRGRIERLAPDGTPVDPIPLPAR
CCCCCEECCCEEEEEECCCCCCCEEECCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCC
NVTKVAFGGADYRTVFVTTARKGLSPEQLDAEPLTGGLFSFGTSIPGQKQAVFPLDRSIV
CEEEEEECCCCEEEEEEEECCCCCCHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCCEEC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]